Bombus huntii (Hunt bumble bee): 126869575
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Entry
126869575 CDS
T10446
Name
(RefSeq) protein PAT1 homolog 1 isoform X1
KO
K12617
DNA topoisomerase 2-associated protein PAT1
Organism
bhun Bombus huntii (Hunt bumble bee)
Pathway
bhun03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bhun00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
126869575
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bhun03019
]
126869575
Messenger RNA biogenesis [BR:
bhun03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
126869575
mRNA degradation factors
5'-3' decay
Decapping complex
126869575
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
126869575
NCBI-ProteinID:
XP_050482296
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Position
9
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AA seq
730 aa
AA seq
DB search
MADFFFGFDTSLANNSLEDGLGCPFEEDDLGEEEEYDALNDETFGSEATIGDWEKDHEKL
AEITESSRPHHQSTLDKKNVTDTNIEDNLSHLVLDEKEGIIPRPGVWDCPSNLSLPKLRP
PLSLTSPLTNVCTVEQLEKGLIANRPPPRLNKPVQTQQQQHQQQQKSDGSLLFESLSAPP
RFPPGLGIPPPHPVVLPPNMRFPHPQFLQHPRLLPNQTGNVLRYPLAAHLMLPHTAQRQP
IHNSFCNNFPPQAPLSNLCPPPFLRADHSIIPPFSSNQTGHQQQQHSFSHSGNQRNQNRA
FHHGEQQGNHQPFFKNNQYHRNHDRNNQRQYHYNHHCQGINGVIGSGEYDEYAGLMSSRE
KQWLINIQLLQLNTNEPYVDDYYYIVFCDRRNRQSINQEQKDKKQHNNNNNNSYHRDSRD
REQPHVLSRPIYIPAQFENSLGKLQFASVIAPRKVIDMDVVPNSDPQLTTQIQQKDTKRT
RQLLLEIERLYIIQLRLEDLHNPLALLNEQQQNQEGENEANNHKKSSTDLINMMLSAFLQ
LIQDDKLPSMLSIRKGKTLLLRFFPYLNVTEHRNQLEEIWNVIFRGLAMIGRRDSHLLMS
LHSEFQRWFDTVHKFGTILRLARSLSDSASQPIKNNSLAFALTNKFGVSVIASMFEQAEK
LYTTDDSSSSDWSSFITNIIEIIGETPPCVAPCRPIAANTLNQHLNRLSHLKCGRYTTLE
LLLTDANPSR
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atggcagacttctttttcggttttgatacgtcgcttgcaaataacagtttagaggatggt
cttgggtgtccattcgaggaagatgatctgggagaagaggaagaatacgatgctctaaac
gatgaaacatttggttctgaagctactattggcgattgggagaaagaccatgaaaaactt
gccgagattacagaatccagtcgtcctcatcatcaaagtactttagacaaaaaaaatgta
actgatacaaatattgaagataatttatcccacttggtactagatgagaaagaaggtatc
attccacgccctggagtatgggattgtccttccaacttatcccttcctaaacttcgacca
ccattaagcttaacatccccattaaccaatgtttgtacggttgaacaactagaaaaggga
ttaattgcaaacaggccaccacctagattaaataaacctgttcagacgcagcagcaacaa
catcaacaacaacagaaatccgatggatcgcttttgtttgaatctttatctgcaccgccg
cgcttcccaccggggttgggtataccacctccacatcctgttgttttaccaccaaacatg
agatttcctcatcctcagtttttacagcaccctagattattaccaaatcaaactggaaat
gtattaagatatcctttagcggcacatttgatgctcccacatactgctcagcggcaacca
attcataattcattttgcaataattttccaccacaagcaccgctttcgaatttatgtcct
cctccgtttttacgagccgaccatagcataatacctcctttctctagcaatcagactggt
catcagcaacagcaacattctttttcgcattctggaaatcaaagaaatcaaaatagagct
ttccatcatggggaacaacaaggaaatcatcaaccattttttaagaataaccagtatcat
cgtaaccatgatcgaaataatcagcgacaatatcattataatcatcactgtcaaggaata
aatggtgtgataggttcgggagaatatgatgaatacgccggtctcatgagtagtcgagag
aaacagtggttaattaatattcaattattgcaacttaacacaaatgagccatatgtcgac
gattattattatattgttttctgcgacagaagaaacagacagagtataaatcaagaacaa
aaagataaaaagcaacacaacaataacaataataatagttatcatagagattccagggat
cgagaacaaccacatgtgctttcaaggcccatatatataccggcacagtttgaaaattct
ttgggaaaattacagttcgccagtgttattgcaccgcgaaaagtcattgacatggatgtt
gtaccgaatagtgatcctcaattaactactcaaatacaacaaaaagatacgaaacgaaca
aggcaattattactggaaattgaaaggttatatataatccaattgagattagaagatctg
cacaatcctttggctctgcttaacgaacaacaacaaaatcaagaaggcgaaaacgaagca
aataatcataagaaaagcagtacagatttaataaatatgatgttatcggcttttctccag
ttaatacaagatgataaattaccaagcatgctaagtattcgaaaaggaaagacgctatta
ctgaggtttttcccatatttgaatgtaacggaacatcgcaatcaattagaagaaatatgg
aatgtgatatttcgaggattagctatgataggacgtagagattcccatctattgatgagt
ctgcattcggaatttcaacgttggttcgataccgtacacaaattcggtacaatacttcga
ctagctcgatcgctgtctgattccgctagtcaaccaatcaagaacaacagtttagctttt
gcactgacaaacaagtttggtgtatctgtaattgcttcgatgttcgaacaagcagaaaaa
ttatataccacggatgattcttcgtcttcggattggtcatctttcataacaaacatcatc
gaaataattggtgaaactccaccctgtgtcgcaccttgtcgaccgattgctgcaaatacg
ctcaatcagcatttaaatcgactatctcatttaaaatgtgggagatatacaactctggaa
cttctactaactgatgccaatccttctcgatag
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