Bombus huntii (Hunt bumble bee): 126869673
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Entry
126869673 CDS
T10446
Name
(RefSeq) DNA mismatch repair protein Msh2 isoform X1
KO
K08735
DNA mismatch repair protein MSH2
Organism
bhun Bombus huntii (Hunt bumble bee)
Pathway
bhun03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bhun00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
126869673
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bhun03400
]
126869673
DNA repair and recombination proteins [BR:
bhun03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
126869673
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_II
MutS_I
RSS_P20
AAA_27
Motif
Other DBs
NCBI-GeneID:
126869673
NCBI-ProteinID:
XP_050482473
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All DBs
Position
9:17170523..17182726
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AA seq
920 aa
AA seq
DB search
MAVQPNQQFNMDPPSQQSFVRFFKNLPEKLNTTIRFFNRSDYYTLHGNDALFAAQEVFKT
TSVCKMIGADPYKTEGVILNKNHFESFIRDLLLVKQYRVEVYVNQGSGKNQNWVLEYKGS
PGNLTQFEDTLFGNNDVAVSVHVIAVKLGMEAKSRIVGLSCVDTTATSFSVCEFQDNESF
SNLESMVVTLAPKECLLIQGEGSYEFQTLKQVMERNNVMVTTRKRSEFSSESVIQDLNTL
IKFKKGQQQNVQSLPEINLSFAMSATSALIKYLDLTSDEGNLNQFAIDQIKESRYLKLDS
AAIKALNIESRVDTSSILNGNAPTSILDILDKCRTSQGHRLLAQWVRQPLKDLCLIKERH
DIVETLVNDNELRTNLSEDHLRRIPDLQVLAKKLARKKSTLQDLYKIYMCISHLPRLLEQ
LSNINVIALKTMFSDPLSELITDMDKFQQMVEQTIDLDSAEKGDFLIRAEFDDELKELKN
TMDEVEAKLQSELGEVANDLSIEAGKSLKLESNQQLGYYFRVTLKEEKVLRNKKQYIILD
SNKSGVRFRSNKLNDLNDEYIVARDKYTVEQKNVVTEIIEIAAGYSSTIKAIGNVLASLD
VLTAFASVAVSANKPYVRPEMLPTEAGEFNLTQVRHPCLEIQGVDFIANDISFKRGECHF
RIITGPNMGGKSTYIRSAGVSALMAHIGSFVPCDQARISLLDCILARVGADDSQLKGLST
FMMEMIETAAILKTATCNSLVLIDELGRGTSTYEGCGIAWSIAEYLAKEIKCYCLFATHF
HEITKLEEEVSTVKNQHVTALVDDNKLTLLYKVKPGICDQSFGIHVAKMANFPQDVIEFA
KRKQAELEDYQDSVFEGSDNPQKKKDIIKEAEVLIAEFISKCRNLDKSLSDAELEDKIST
FKREVLSHENPYIKTLLSAS
NT seq
2763 nt
NT seq
+upstream
nt +downstream
nt
atggctgtccaaccaaatcaacaatttaatatggatccaccaagtcaacagagttttgtt
agattttttaaaaatctaccagaaaaacttaataccactatacgattttttaatagatca
gattattacacattacatggtaatgatgctttatttgctgcacaagaagtttttaaaact
acgtcagtttgtaagatgataggagctgatccatataaaaccgagggtgttattcttaac
aaaaatcattttgaatcttttatacgtgatctactgttagtaaaacaatacagagtagaa
gtttatgttaatcaaggatcaggaaagaatcagaattgggtattagaatataaaggttct
cctggaaatttaacacaatttgaagatacactgtttggtaataacgatgttgctgttagt
gtacatgtcatagcagtgaaattaggaatggaggcaaaatctagaattgttggcttaagc
tgtgtagatactacagcaacttcattttctgtttgtgaatttcaagacaatgaatcattt
tccaatttggaatcaatggttgtcacactcgctcccaaagaatgtttattaattcaaggt
gaaggcagctatgaattccaaactcttaaacaagtcatggaacgaaataatgtaatggtt
actacaaggaaaagaagtgaattttctagtgaatcagttatacaagatttaaatacttta
ataaaattcaagaaaggtcaacaacaaaatgtacagtctttacctgaaatcaatttaagc
tttgctatgtcagctacttctgcgcttattaaatatttagatttgacatcagatgaagga
aatttaaatcaatttgctatagaccaaataaaggagtcacgttatttaaagctagattca
gctgctataaaagcacttaatatcgaatcacgtgttgatacctcctctattttaaatgga
aacgcacctacaagtattctggacattttggataaatgtaggacttcacaaggtcataga
ttgcttgcacaatgggttagacaacctttaaaagatttatgtcttataaaagaaagacat
gatattgttgaaacactagtgaatgataatgaattacggactaatcttagtgaagatcat
ttaagacgcataccggatttgcaagtgcttgcaaaaaaattggccagaaaaaagtcaact
ttacaagacctttataagatttacatgtgtatatcacatttgcctagattattagaacag
ctttctaatataaacgtaatagccttaaaaacaatgttcagtgatcctttgagtgaactt
attacagacatggacaaatttcaacaaatggttgaacaaacaattgatttagattccgcc
gaaaaaggagatttcttaatacgagccgaatttgatgatgaattgaaagaattaaaaaat
actatggatgaagtggaagcgaaattacaatctgaattgggtgaagttgctaatgatctt
tcaatcgaagctggaaaaagtctaaaactagaatcaaatcaacagcttggatattatttt
cgtgtaacattgaaagaagaaaaagtactaagaaataagaaacagtatattattctggat
tctaataaaagcggtgtacgatttcgaagcaataaattaaatgatttaaatgatgaatac
attgttgctagagataaatatacagtggaacaaaaaaatgttgttacagaaataattgaa
atagcagccggttacagtagtacaataaaagctattggaaatgtattggcatctcttgat
gtacttactgcttttgcttctgttgctgtaagtgctaataaaccatatgtacgtcctgaa
atgctacctacagaagctggtgagtttaatcttactcaagttcgacacccatgtttggaa
attcaaggagtagattttatagctaatgatatcagttttaaaagaggcgaatgtcatttt
cgcatcataactggtccaaatatgggaggtaaaagcacctatataagatctgctggtgtc
agtgctttaatggcacatattggaagctttgttccttgcgatcaagcaagaatatcatta
ttggattgtatattagcccgtgtaggagctgatgattctcaattaaaagggctttctaca
tttatgatggaaatgatagaaactgctgctatattaaaaacagcaacttgtaattccctc
gtgttaattgacgaattaggcagaggaacttctacttatgaaggttgcggtatagcatgg
tcaatcgccgaatatttagcaaaagaaatcaaatgctactgtctttttgcgacacatttt
catgaaataactaaattagaagaagaagtatctaccgttaaaaatcaacacgttacagcc
cttgtagacgataataaattaactttattatataaagtaaaacctggtatatgtgatcaa
agttttggcatacatgtcgctaaaatggctaatttcccacaagatgttatagagtttgct
aagcgtaaacaagcagagcttgaagattaccaagactcagtttttgaaggttctgataat
ccacaaaaaaaaaaagatattataaaggaagctgaagttcttattgcagaatttattagt
aaatgcaggaatttagacaaatcattatctgatgcggaactggaagataaaatttcaaca
tttaaaagagaagttctatctcacgaaaatccctacataaagacactcctatcagcttct
taa
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