Bombus huntii (Hunt bumble bee): 126870122
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Entry
126870122 CDS
T10446
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm8
KO
K12627
U6 snRNA-associated Sm-like protein LSm8
Organism
bhun Bombus huntii (Hunt bumble bee)
Pathway
bhun03018
RNA degradation
bhun03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bhun00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
126870122
09123 Folding, sorting and degradation
03018 RNA degradation
126870122
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bhun03019
]
126870122
03041 Spliceosome [BR:
bhun03041
]
126870122
Messenger RNA biogenesis [BR:
bhun03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
126870122
mRNA degradation factors
5'-3' decay
Lsm complex
126870122
Spliceosome [BR:
bhun03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
126870122
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
DUF150_C
Motif
Other DBs
NCBI-GeneID:
126870122
NCBI-ProteinID:
XP_050483563
LinkDB
All DBs
Position
10:complement(4788340..4789910)
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AA seq
96 aa
AA seq
DB search
MASGLESYVNHTVSIITSDGRNFIGTLKGFDQTINIILDESHERVYSTTQGVEQVVLGLH
IIRGDNVAIVGELDDEMDARLDLSAIRADPLSSIVH
NT seq
291 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcaggtttagaaagctacgtaaatcacactgtttctattattacttctgatggc
agaaacttcatcggaacattaaaaggatttgatcaaactattaatataatattagatgaa
tctcatgaacgtgtgtacagtacaacgcaaggtgtagagcaagtagtattaggtttacat
atcatcagaggtgacaatgtggcaatcgtaggggaattggatgacgagatggatgcacgt
ttagatctatcagctataagagctgatcctttaagttctattgtacattga
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