Bombus huntii (Hunt bumble bee): 126871116
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Entry
126871116 CDS
T10446
Name
(RefSeq) collagen alpha-1(IV) chain isoform X1
KO
K06237
collagen type IV alpha
Organism
bhun Bombus huntii (Hunt bumble bee)
Pathway
bhun04512
ECM-receptor interaction
bhun04820
Cytoskeleton in muscle cells
Brite
Exosome [BR:
bhun04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
126871116
Glycosaminoglycan binding proteins [BR:
bhun00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
126871116
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
126871116
NCBI-ProteinID:
XP_050485516
LinkDB
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Position
11:complement(1713709..1740231)
Genome browser
AA seq
1941 aa
AA seq
DB search
MTRLGLRFVASAVFLAGIVGGQYNHTSWSYNPPPVVPLGRGDIGKPNSTDDDYNISPRWR
AFVTNNEDSEEDRRYLNNQGQGYQGQNYDDRYNRYPDSDDYNQRTDDSGGYQTNYGGLDQ
ESYNQGQDQIPLDPYNQEAGDPYGRSGGYEDSYGRGEAGGEQRSRDSSGDGYDRNYGSRD
DYGRGDPYGQRGYSSGQRGGYGAAGDSDNYPSSYTVVPVPGYKPQRNCTGSACCVPKCFA
EKGSRGPPGVMGPQGPKGQKGFPGTEGLLGPKGEKGDPGPQGLRGPKGDRGKMGIPGFSG
ISGVPGVQGPPGAPGLPGRDGCNGTDGEPGDAGRPGDTGPRGYPGPRGPKGDKGQSGFAG
RFPVGQKGEPGIDGVRGPPGQPGLQGERGFPGPKGDRGPYGPPGLQGPRGEKGNMGLAFE
GPKGDKGQKGEQGPPGSPAVGGFLHPGEEIAGPQGERGEKGDTGERGSDGQKGEQGPIGD
HGIPGTAGMKGEKGLPGAPGIRGRDGFSGPPGPPGRKGDRGYDGLDGLSGRPGQKGEPGR
DGPMGVPGLRGPPGPPGGGKGTPGPPGPKGPQGFPGPTGPRGADGYPGDPGPRGPIGPSG
GPGLAGIPGPEGLPGEKGAKGEPGITGFPGPTGPRGFDGPPGLAGSRGLPGEKGASIMGP
KGMDGAPGRDGEKGQKGERGYAGPRGVPGDVDGIPGAPGEPGLPGEPGTPGKNGIPGFPG
SPGEKGEIGGRCIDCLPGLPGIKGDRGFDGQPGLPGPRGPAGERGFPGEPGSDGLPGPIG
PPGPPGKDGIPGAAGPQGEPGTPAVVTENMLKVEKGDKGVRGPVGRDGPPGLPGPPGEKG
PMGFEGFPGPKGVAGDRGFPGQDGIPGRPCVPGRKGEPGVSVKGEHGEPGRRGETGAKGE
PGPLGDKGEPGLCPIPDELIKGIKGDRGAPGEKGEPGPPGRDGLSGDKGLQGISGPPGPP
GSIGAPGPVGPRGLPGPRGDKGNIGPMGFPGEPGREGPRGFPGAAGLKGAKGEVGISVKG
SPGLPGPPGQKGEKGLPGPPGKEGPDGLPGLPGFSGEKGDAGIPGIGGLPGAPGEKGDTG
PMGPPGPPGVAGIPGIDGSKGEPGLPGEAGKPGLPGFPGIKGDRGEPGIDGSKGYPGRRG
LPGLQGRPGIEGAPGLKGERGEKGAPGFPGLRGMEGKPGRPGLTGPKGDIGHPGLPGLPG
TIGFQGPKGDQGLPGLPGRKGEPGLVSEKGQKGEPGMPGIRGPVGPPGRDGIDGDKGERG
LSCNCLDGLPGLKGEPGLPGRDGLPGPIGLKGDAGVRGFHGSQGDIGPMGPPGEPGTPGI
DGLPGEPGDIGPPGPPGFPGSDGDVGAPGHPGLNGGKGDRGLPGLVGEPGIRGMPGEKGD
RGQPGPTVAIKGEKGEPGMPGLRGVAGEKGDRGEEGLAGYDGEKGDRGTPGPVGNPGPPG
LPGPKGEEGPRGPTGIAGLTIKGEKGLPGLPGKHGREGVPGRPGEKGERGLPGLPGHKGD
QGPYGPVGPQGEKGDMGLMGSPGLPGQDGAPGHRGLPGQEGPKGEKGDNCIPEPGLPGQK
GEPGYPGVSGIDGLPGEKGDRGWPGLEGPPGLDGEKGERGFPGPTGKKGAIGFVGQKGDK
GLDCLEPPMGPKGDRGYPGLTGPPGSPGEKGASGQPGFPGSHGMKGAPGPQGPPGPVGLP
GLQGPVGAPGLPGLQGPVGHPGEPGEPGLPCEAAPDYLTGILLVKHSQTDRVPVCDAGHI
QLWEGYSMLSTDGNERSHSQDLGHAGSCVRKFSTMPFLFCDTGNVCNYASRSDRSYWLST
TKAIPMMPIEGTAIEEYISRCVVCEVPANVIAVHSQSLNIPDCPHGWTGLWIGYSFVMHT
GAGAQGGGQSLSSSGSCLEDFRTTPFIECNEEHCHYYSNEISFWMTTIEDRLQFQRPEKQ
TLKAGNLRSRISRCQVCIKNT
NT seq
5826 nt
NT seq
+upstream
nt +downstream
nt
atgacccggttgggattgcgattcgtcgcatccgcagtgttcctggccgggatagttggt
gggcaatataaccacacatcatggtcgtacaatcctccgcctgttgtaccacttggacga
ggtgatattggaaaaccaaatagtacagacgacgattataatatttcaccacgatggagg
gcttttgttacgaacaacgaagattctgaggaagataggcggtacttaaataaccaaggc
caaggctatcaaggtcagaattacgatgatcggtacaacagataccctgatagcgatgac
tataatcagagaactgatgattccggcggatatcagactaattatggaggcttggatcaa
gaatcctacaaccaaggtcaagatcaaatcccgttggatccttacaatcaagaagctggc
gatccttacggaagatctggaggttatgaagactcttacggaagaggagaagccggagga
gaacaaagatccagagattcttctggcgatggctacgatagaaattatggatccagagac
gattatggacgcggagacccttacggacaacgcggatactcttcagggcaacgtggagga
tatggcgcggccggagattcggacaattatccgagcagttacacggttgtgccagttcca
ggatacaagccacaacgaaactgtaccggatcggcctgctgcgtgccaaaatgtttcgcg
gagaaaggttccagaggaccgccaggtgtaatggggccacagggacctaaaggtcaaaaa
ggatttcctggaacagaaggtcttttgggaccaaagggagaaaaaggtgatcctggtcct
caaggactacgcggtccgaaaggtgacagaggtaaaatgggtatacctggattctccggt
ataagtggtgttcctggagtacaaggtccacccggagctcctggtctacctggtcgtgat
ggctgcaatggaacagacggtgaacctggtgatgctggtcgtcctggagatacaggtcct
cgtggttatccaggtcctcgagggcccaagggagacaaaggtcaatcagggttcgccggt
aggttccctgtaggtcaaaagggagaaccgggtatagatggtgtcagaggacctccagga
caaccaggattacaaggagagcgtggatttcctggacctaagggtgatcgtggtccttat
ggtccgcctggtctacaaggaccaagaggagaaaagggaaacatgggtcttgcgttcgaa
ggtccgaaaggtgacaaaggtcagaagggagagcaaggacctcctggatcgcctgcagtc
ggcggctttctacatccaggagaagaaatagcaggtccacagggagagcgtggtgaaaaa
ggagacacgggtgaaagagggtcggacggtcaaaaaggagaacagggaccaattggtgat
catggtattcctggtactgcaggtatgaaaggagaaaaaggtcttccaggcgcaccaggt
attcgtggacgggatggtttctctggacctccaggtccgcctggacgcaaaggtgatcga
ggttatgacggattagacggcctttcaggtcgtcctggacagaaaggagaaccaggtcga
gatggacctatgggtgttccaggcttacgaggaccacctggtccacctggaggtgggaaa
ggtacgccagggcctccagggccaaaaggacctcaaggttttccaggacccactggaccg
cgcggtgccgatggatatcccggagatccaggaccaagaggtcctattggaccatcagga
gggcctgggttagcaggtattcctggtccagagggtttaccaggagaaaaaggagcaaag
ggagaacctgggatcacaggattccctggaccaacaggtccccgtggatttgatggtccg
ccaggtttagcaggttcacgagggctgccaggagagaaaggagcgtcgattatgggcccc
aaaggaatggatggagcgcccggtagagatggcgagaaaggacaaaaaggagaacgcggt
tacgcaggaccgcgtggagttcctggcgacgtggatggtattccaggagcgcccggagaa
cctggtttaccaggagaaccgggaacgccagggaaaaacggcattccaggatttccagga
tcacctggtgagaagggagagataggagggcgttgtatagactgtctgccgggattacca
ggaatcaaaggtgatcgtggtttcgatggacaacctggacttcctggtccacgaggtccg
gctggagaacgaggattccccggagaacctggcagcgacggattacctggaccaattggg
ccaccagggcctccgggaaaagatggcattcctggtgcagcaggtccacaaggagaacct
ggtactccagcagtggttacggaaaacatgcttaaagtagaaaagggcgataaaggtgtg
agaggtccggtaggaagagatggtccacctggtcttcctggtccgcctggagaaaaaggt
ccgatgggatttgaaggtttcccaggacccaagggtgttgctggagatcgcggattccct
ggtcaagatggtattcctggaagaccatgtgttcctggtcgaaaaggagaacctggtgtt
agtgtgaaaggagaacatggagaaccaggccgaagaggtgaaacgggtgcaaagggcgaa
cctggtccactaggagataaaggagaacctggtctgtgtccaattccggatgaattaatt
aaaggaattaaaggcgacagaggtgctcccggtgaaaaaggagagcctggtccacccgga
agggatgggttaagcggtgacaaaggtttacaaggtatttcgggcccacctggaccaccg
ggatcaattggtgcacctgggccagttggaccaagaggattaccaggtcctcgtggtgac
aagggtaatataggaccaatgggtttccctggggaacctggtcgtgaaggacccagaggg
ttcccaggcgctgcagggttgaaaggagcaaaaggtgaagttggtatctcggtcaagggc
agtcctggattgccaggaccaccgggacaaaagggagagaaaggtcttccaggaccacca
ggaaaggaaggtcctgatggtctgccgggtttgccaggattttccggagagaagggtgat
gcaggtattccaggcataggtggtttgcctggtgcgccaggagaaaagggagatactggt
ccgatgggacctccaggcccgcctggtgttgctggaattcctggtatagacggaagtaaa
ggtgaaccgggattgccgggcgaggctggcaaaccaggactcccaggattcccaggtatc
aaaggtgatcgtggcgaaccgggtatcgatggatcgaaaggttacccaggaagacgtggt
ctacctggtttacaaggtagacctggtatagaaggtgcacctggtttgaaaggagaacga
ggtgaaaaaggcgcccctggtttccctggattacgtggaatggaaggaaaacctggccgc
cctggattaactggaccaaaaggagatataggtcatcctggtctgcctggtcttcctgga
actatcgggttccaaggacctaaaggtgatcaaggtttaccaggattgccaggacgcaaa
ggagaaccaggtctagtttctgagaaaggacagaaaggtgaaccaggaatgccaggtatc
cgtggtcctgttggtcctcctggtagagatggtattgacggagacaaaggggaacgtgga
ttgtcgtgtaattgtttagacggattgccaggtcttaagggagaacctggtctgccaggt
cgcgatggtttaccaggacctatagggctaaaaggtgacgctggagtaagaggtttccat
ggttctcaaggagatataggaccaatgggtccaccaggtgaacccggaacacctggaatc
gacggattaccaggcgagccaggtgacatcggtccaccgggtccacctggtttccctggt
tcggatggtgatgtgggagctccaggacatcctggcctcaacggtggcaaaggagaccgt
ggtttgccaggtcttgttggggaacctggtatccgtggtatgcctggagaaaaaggtgac
cggggacaacctggaccgacagttgcgatcaaaggtgagaaaggcgaaccaggtatgcca
ggattacgaggtgtagctggagagaaaggagatcgtggcgaggaaggtctagctggttat
gatggcgaaaaaggagataggggcacaccaggtccagttggaaacccaggtccacctggc
ctccctggacctaaaggtgaagaaggtccacgtggacctacgggaattgctggattaact
atcaagggtgagaagggtttaccaggtctgccaggaaagcacggacgagaaggagtacca
ggacgaccaggagagaagggagaacgaggattacctggtttaccaggacataaaggagat
cagggaccttatggacctgttgggccacagggcgagaaaggagatatgggacttatgggt
tctcccggtttaccaggtcaagatggagctccaggtcatagaggactcccgggtcaagaa
ggtccaaagggtgaaaaaggtgacaattgtataccagaaccaggtctgccgggacaaaag
ggagaaccaggatacccaggagtttccggaattgatggactccccggtgaaaaaggtgac
agaggttggcccggtctagagggtccacctggtctggatggagagaaaggtgaaagagga
ttcccaggtccaacgggaaaaaagggtgctattgggtttgttggtcagaagggtgacaag
ggtctcgactgcctcgaaccaccgatgggaccaaaaggagaccgtggttatcctggactt
actggcccgccaggctcgccaggagagaaaggagcttcaggtcagccaggattcccagga
tcgcatggaatgaaaggtgcaccaggacctcaaggaccaccaggtccagttggattacca
ggactgcaaggacctgttggtgctcctggtttaccaggtcttcaaggacccgtgggtcat
ccgggtgaaccaggagaaccaggactaccatgcgaagctgcgcctgactaccttactggt
atcttgctagtaaaacacagtcaaactgacagagtgcctgtttgtgatgcaggacatatc
caactctgggaaggatacagtatgttatctacggatggcaatgaaagatcgcactcacaa
gatttaggtcatgccggctcgtgcgtgcgaaagttctcgacgatgccgttcctcttctgc
gacaccggcaacgtttgtaactatgcgagtcgtagcgatcgttcttactggttgtcgacc
actaaagcaattcccatgatgcctattgaggggacagcgatagaggaatacatctccaga
tgcgtggtttgcgaggttccagcgaatgtgatagccgtacacagccagtcattgaatatt
ccagattgtccacacggatggaccgggctttggatcggatacagttttgtcatgcatacg
ggtgccggtgcccagggtggaggacaatccttgtccagttccggatcctgtctggaagat
ttccgtacaacgccatttatcgaatgtaacgaagaacactgccattattactcgaacgag
atcagcttttggatgacgacgatagaggacaggcttcagttccaaaggcctgagaaacag
accttgaaggcaggcaacctcaggtcccgaataagtcgctgccaagtgtgtataaagaac
acgtaa
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