Bombus huntii (Hunt bumble bee): 126871591
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Entry
126871591 CDS
T10446
Name
(RefSeq) SR-related and CTD-associated factor 4
KO
K13191
RNA-binding protein 16
Organism
bhun Bombus huntii (Hunt bumble bee)
Brite
KEGG Orthology (KO) [BR:
bhun00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bhun03021
]
126871591
03041 Spliceosome [BR:
bhun03041
]
126871591
Transcription machinery [BR:
bhun03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
126871591
Spliceosome [BR:
bhun03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
126871591
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CID
RRM_1
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
126871591
NCBI-ProteinID:
XP_050486509
LinkDB
All DBs
Position
12:9042058..9055069
Genome browser
AA seq
1490 aa
AA seq
DB search
MEAVKAFNAELSALYDVKPPISKAKMNSLTRGAIKAIKFYKHVVQSVEKFIQKCKPEYKV
PGLYVIDSIVRQSRHQFGVEKDVFAPRFAKNMQTTFLNLLKCPQEDKSKVIRVLNLWQKN
AVFPSEVIQPLFDLADPNHPIHKEQAVNTNGTLIASATNNVGNTTTSVKTPPLTAKNAVK
DQKLFSSAKPIDPAWLAQTKIETANIVNANKLLGQSNSTQMDVSFLDQLQHLQQLLLKKQ
ESTNEQKSSVKFDKKLLDFDYGEEEDDDVVVASSPAATAGSNTGQHNTVSTGNSLESLGL
LLTNPEVLRQLQTLQQTMQGSTSSSQHETEEKMRKLQQMKQQEEEFDKHLAQTVPNLPFA
SECELKPSDILKPSQQNTYTTNVSSGVIQDMSQPPPGYPPALPYASQPLSNIRQINQQAH
QNQKSPLLDERQDAQDYSGNGARRDSSSVEIVNCENTRSQSRSPDRYRHHSRSRSPRHRD
RDRDRDRDRDRDRDRDRDRKSRSRSRSRRRRSRSRDRGRDRKREDSREKMTEEEREKERE
RRKRGLPPIVRDKLSVCSTTLWVGHLSKLVHQEELSDTFGEFGDIVSIDLISPRGCAFIC
MNRRQDAYRALTKLKNHKMQGKAITLAWAPGKGVKGKEWKDYWEVELGVSYIPWNKLVNV
TDQDLELLEEGGMIDEDTLPPNLKGKLKHSGTNADVLQQQLQLQQQALVAAAGIPNLADG
IVNVMQPSTSAQQQQSQQQTSQQGQQQQQVIDTSQPPPIRPPTSAALLPPPNTQLQMMPP
AFTMPGVPRMIGPMGLPMAHSLMPNVPIGVPPPNMQSLLGPPGMMQTMLTPPVNSPFGAG
VGVGLLTQIPLPAPAAPSDKPNSTGMPHNVPPIGVPPPTTETGMPNLPMLRQPYGVGPSA
PLQMQLPQQQHSADDMDVEMEDAMPQSSNGAKNKSNLTEQQLSQNEERAESDQQVEHRDY
KERERDRENRERRDRETHLSHRDREGTDSRMDRGRDRGRGRDRGRDRRRDLRDRDRDDRR
ERENRENREGNPQTQTLQENETTPKKDGKPSLADRLRQLADGTLPLEDRVDRIIPRNRQE
RDRSDRSFDDSRSARGEPLSSLMDLPKFGLPQERGDFPARPPDFRNPQDPREYQQQRDRQ
SFGRGHRGSQIHEEFMDVPRLQGGIYQEEFDNRIHGQQRVEEFGRLGSLREQREEFDRSE
VRGRRPLDDRDRFDYEIRREGFDPRLQDGFDPRGHLDRGDFEPRRREFFGIDPIFGMPPI
MGPRGPRPGHPDGFGPRPAPLGARGPGPLMFHPRGLGPRPLRPGMRPFGPRGPPFDPREP
DAFFRPPFDDIRPHVRPPFGPMGPPSIIPPESAAPWRNQELPPSGSWPSDSENHSQRDNL
RDKKGGNKHPNNMERENRNRGRKSRWTNVSPSGEEIEESKEQESTSANVEEKEEPAKEEE
VAVKEEVKEEIDMKEVISNEQKEELVETVETKEEEGIEMKKEEEEDCRDS
NT seq
4473 nt
NT seq
+upstream
nt +downstream
nt
atggaggcggttaaggcatttaacgcagagctctcagctctgtatgatgttaaaccacca
atttccaaagctaagatgaattctttaactagaggtgcaattaaggcaattaaattctat
aaacatgttgtgcaaagtgtcgagaaattcatccaaaaatgtaagccagagtacaaagtg
cctggattgtacgttatagattcaattgtacgtcagtccagacaccaatttggggttgag
aaagatgtctttgctccacgctttgccaagaacatgcaaactactttcttaaatcttttg
aagtgccctcaggaagataaaagcaaagtaataagagttttaaatctttggcagaagaat
gcagtgttcccttcggaggttatacagcccttatttgatcttgcggatccaaatcatcca
atacataaggagcaagcagttaataccaatggtacactgattgcgtctgcaacaaataat
gttggtaatactacaacttcagtaaagactccccctttgactgcaaaaaatgcggtaaag
gatcaaaaattattttcttccgcaaagccaatcgatcctgcctggcttgcgcaaacaaaa
atagaaacagcaaatatagttaatgctaataaacttttagggcaatccaattcaactcaa
atggatgtttctttccttgatcagttacaacatttacagcagttattattaaaaaagcag
gagtccacaaatgaacagaaaagttctgtaaaatttgataaaaagctcttagattttgat
tatggcgaggaagaggatgatgacgttgttgttgctagttcaccagcagcgaccgcagga
tctaatactggtcaacacaatacagtttcaacaggaaatagtttggagagtcttggactt
cttttaacaaatccagaggttttgagacaacttcaaacattacaacaaacaatgcaggga
agtacttcctcatcacagcatgaaacagaagaaaagatgcggaaacttcagcaaatgaag
cagcaagaggaagaatttgataaacatctggctcaaactgttcctaatttaccatttgca
tctgaatgcgaattaaaaccatcagacattttgaagccaagtcaacaaaatacttataca
acaaatgtaagtagtggagtcatacaagatatgagtcaaccacctcctggttatccaccg
gctctaccgtatgcctctcaacccttatcaaatattaggcagataaatcagcaagcgcat
caaaatcaaaaaagtccacttcttgacgaacggcaggacgcgcaagattattctggaaat
ggtgcaaggcgagatagtagcagtgtagaaattgtaaattgtgaaaatacaagatcgcag
agtagatcgcctgatcgatacagacatcacagtcgatctagatcaccacgacacagagat
agggatagagatagggatagggacagggacagggatcgagatcgagacagagatagaaaa
tctagatcaagaagcagatctaggaggagaaggtctcgttcaagagacagaggtcgtgac
agaaaacgggaggatagtcgagagaaaatgactgaggaagaacgagaaaaagaaagagaa
aggcgtaaacgaggattaccaccaattgtgagagataaattaagcgtttgtagtacaact
ctttgggtgggacatctatcgaaattagtacaccaagaagaactttcagatacttttgga
gaatttggtgatattgtcagtatagatttaatttcacccagaggttgcgcctttatatgc
atgaatagaaggcaagatgcatatagggctcttactaagcttaaaaatcataaaatgcaa
ggaaaggcaatcactttagcttgggctccaggaaaaggggtgaaaggaaaagaatggaaa
gattattgggaagttgaattaggagttagttatattccttggaataaattagttaatgtt
actgatcaagatttagaattattagaagaaggaggtatgattgacgaagacactctacca
cccaatctaaaaggtaaattaaagcattccgggacaaatgcagatgtacttcaacaacag
ttgcaattacaacagcaagcattagttgcagctgctggaattccaaatttggcggatggt
attgtaaatgtaatgcaaccttcaactagtgctcaacagcaacaatcccagcaacaaact
tcacaacaaggtcaacagcagcaacaagtaatcgatacaagtcaacctccaccaattaga
ccccctacatcagccgctcttttaccgccaccaaatacacaattacagatgatgccacct
gcttttacaatgccaggagttcctcgtatgattggaccaatgggattaccgatggcacat
agtttaatgccgaatgttcccataggtgtgccacctccaaatatgcaaagtttattaggg
ccaccgggaatgatgcaaactatgttaacaccacctgtaaattctccatttggagcaggt
gttggcgtcggcttattaactcaaattcctttaccagctccagctgctccatctgataaa
cctaattctactggtatgccacataatgttcctccaataggagttcctcctccaacaaca
gaaacaggtatgccaaatttaccaatgttacgccaaccatatggtgtaggcccttctgcg
cctttgcaaatgcaactacctcaacaacaacattctgctgatgacatggatgtagagatg
gaagatgcaatgccacaaagttcaaatggagcaaaaaataaaagtaatttaactgaacaa
caactttcacaaaatgaagaacgagcagaatctgatcaacaagtagagcatcgagattat
aaagaaagagagagagatcgggaaaatagggaaagaagagacagagagacgcatttatca
cacagagatagggaaggtactgactctagaatggatcgcggaagagaccgaggtagaggg
agagataggggacgcgatcgtagaagagatcttagagatagagacagggatgacagaaga
gaaagggaaaaccgggaaaatcgagaaggaaatccacaaactcaaactcttcaggaaaac
gaaactactccaaaaaaagatgggaaaccaagcttagctgatcgtttgcgtcaattggct
gatggcacactaccacttgaagatcgtgtcgatcgaataatacctcgtaatcgccaggaa
cgagatagatccgacagaagttttgatgattctcgatcggctcgtggagaacccctgtct
tctttaatggatttgccaaagtttggtttacctcaagaaagaggtgattttccagctcga
ccaccagattttcgtaatccgcaagatccgagagaatatcaacagcaaagagacagacaa
agtttcggaagaggtcatagaggatcacagatacacgaggaatttatggatgttccaagg
ttgcaaggaggaatatatcaagaggaatttgataatagaatacatggacaacaaagagta
gaagaattcggaagacttggatcactcagagaacaaagggaggaatttgataggtctgaa
gtacgaggaaggagaccactcgatgatcgggatcggttcgattatgaaattaggcgagaa
ggttttgacccacggcttcaagatggttttgacccaaggggacacctcgatcggggtgat
tttgaacctagaaggcgagaattctttggaattgatcctatttttgggatgccgccaata
atgggacctagaggacctagacctggacatcctgatgggtttggaccgcggccagctccc
ttaggagctcgtggaccaggtccattaatgttccatccacgaggtttgggacctcgtcct
cttcgtcctggtatgaggccttttggtcctcgtgggccaccttttgatccccgagagccg
gatgcctttttcagaccaccttttgatgatattcgcccccatgtcagaccacctttcggt
cctatgggcccgccatccattattcctccggagtctgctgctccctggagaaatcaggaa
cttccgccttctggttcctggccttccgattcagagaatcactcacaaagggataatctt
agggacaaaaaaggtggtaataaacatccgaataacatggaaagagaaaatcgaaatagg
ggacgaaaatctagatggactaatgttagtccatctggagaggaaattgaagaatcaaaa
gaacaagaatcaacctctgcgaatgttgaagaaaaagaagaacctgcaaaggaagaagaa
gtagctgtgaaagaagaagtgaaagaagaaattgatatgaaggaagtaatctctaatgaa
cagaaggaagaattagtagaaacggttgagacaaaagaagaagaaggcattgaaatgaag
aaggaggaagaagaggattgcagggattcttag
DBGET
integrated database retrieval system
