Bombus huntii (Hunt bumble bee): 126871928
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Entry
126871928 CDS
T10446
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit isoform X1
KO
K07466
replication factor A1
Organism
bhun Bombus huntii (Hunt bumble bee)
Pathway
bhun03030
DNA replication
bhun03420
Nucleotide excision repair
bhun03430
Mismatch repair
bhun03440
Homologous recombination
bhun03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
bhun00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
126871928
03420 Nucleotide excision repair
126871928
03430 Mismatch repair
126871928
03440 Homologous recombination
126871928
03460 Fanconi anemia pathway
126871928
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bhun03000
]
126871928
03032 DNA replication proteins [BR:
bhun03032
]
126871928
03400 DNA repair and recombination proteins [BR:
bhun03400
]
126871928
Transcription factors [BR:
bhun03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
126871928
DNA replication proteins [BR:
bhun03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
126871928
DNA repair and recombination proteins [BR:
bhun03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
126871928
MMR (mismatch excision repair)
126871928
DSBR (double strand breaks repair)
HR (homologous recombination)
126871928
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
CDC24_OB3
IBR
Motif
Other DBs
NCBI-GeneID:
126871928
NCBI-ProteinID:
XP_050487255
LinkDB
All DBs
Position
12:8241140..8245215
Genome browser
AA seq
595 aa
AA seq
DB search
MYSLTEGALDKIMNGIEVDRPILQILGHKKLSSSNSGERYRLLVSDGKRINSFTMLATQL
NSMITDNVLTEFSICQINRYAISVVNNAGKQKRVMVILSVDLKVAGDEVGRKIGNPTNAD
ADGESKPAQSVQSAQAASQQQSSLMSKHSGQQSSTSDISTIPIVALSPYQNRWVIKARVV
NKSAIRTWSNSRGEGKLFSMDLVDESGEIRCTAFRDQCDKFYDMIEIGKVYYISRASLKT
ANKQFNNLKNDYEMTLTGDSEIIPCHDTGDEIPTLQFDFIPINNIEQKEKNDIIDVLAIV
KSRGDLQMLVSRTTGKDMKKRDINLIDESNTMVTLTLWGTQAEEFSGNDNPVLAIKGARV
GEFNGGKNLSTLSGTAVQVDPDIPEAHRLRGWFNTTGCHEEAKPLSRAFGSAAQMSQALI
TIGEANSQIDKKNGPEIFTVKATINLLRTENILYKSCPSENCKKKVIDQANGMYRCEKCN
KEFPNFKYRLLGSLSLADWTDNMWVTAFNDETEKILGITAQELGELKENDNDAYLEKLGE
VTFKSFIFKIRTKMETFGDENRLRSTCIDVSPTDCKAYNEDLITKLKELTGIDST
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atgtattcacttacggaaggagcattggataaaatcatgaacgggatcgaggtcgatagg
ccgatattgcaaatattgggtcacaagaaattgtccagttcaaatagtggagaacgttac
agacttctcgtatctgatggaaaacgaataaattcatttacgatgcttgccacacaatta
aattcaatgataactgataatgtattaacagaattttccatttgccaaataaatagatat
gctataagtgtggtaaataatgctggcaaacaaaaacgagtaatggtgatattaagtgtt
gatttaaaagttgcgggtgatgaagttggacgtaaaattggtaatccaacaaatgctgac
gctgatggtgaatctaaaccagcacaaagtgtacagtctgcgcaagctgcttcacaacag
caaagtagcttgatgtcaaagcatagcggtcaacagtcttctaccagtgatatatccaca
atcccaatcgttgcattgagtccttatcaaaacaggtgggtaataaaggcacgagttgtc
aataaatctgccattagaacgtggagtaattcacgtggtgaaggaaaattgttttccatg
gatcttgtggacgaaagtggagagattagatgcactgcatttagagatcagtgtgataaa
ttctatgatatgattgagattgggaaggtttattacatttccagagcatctttaaaaact
gcaaataagcaatttaataatttaaaaaacgattatgaaatgactctaactggtgattca
gaaataattccatgtcatgacactggagatgaaattccaactcttcagtttgatttcata
ccaataaacaatatagagcaaaaggagaaaaatgatataatagatgttttggctattgta
aaatctcgtggtgatttgcagatgttagtatcacgaaccactggtaaagacatgaaaaaa
agggatattaatctcattgatgaaagtaatactatggtaacgcttacactatggggtaca
caagctgaagaattttcaggaaatgataatccagttttagccattaaaggagctcgtgtt
ggcgaatttaacggtggaaagaatttgtctactctcagtggaactgctgtacaggttgat
ccagatattccagaagcacatagattacgaggttggtttaacacaactggatgtcatgaa
gaagcaaagccactttcaagagcatttggaagtgcagctcaaatgtctcaggcattgatc
acaattggcgaagcaaacagtcagatagataaaaagaacggtccggaaatatttacggtg
aaggcgaccattaatctcttacgcactgaaaatattttatataaatcgtgccctagtgaa
aactgcaaaaaaaaggtgatagatcaagcaaatggcatgtacaggtgcgaaaaatgtaat
aaagaattccctaacttcaaatatcgtttacttggaagcctaagcttggctgactggaca
gacaatatgtgggtcacggcatttaatgacgaaacagagaaaattttaggtattacagct
caggaacttggagaattaaaagaaaatgataacgatgcttacctggaaaaacttggcgaa
gtaacatttaaaagtttcatatttaagataagaacgaaaatggaaacattcggtgatgaa
aacaggttaagatcaacatgtattgatgtatccccaaccgattgtaaagcctacaacgaa
gacttaataaccaaactcaaagaattaactggtattgatagtacataa
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