Blautia hydrogenotrophica: BLHYD_01680
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Entry
BLHYD_01680 CDS
T09635
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
bhv
Blautia hydrogenotrophica
Pathway
bhv03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bhv00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BLHYD_01680 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bhv03021
]
BLHYD_01680 (rpoC)
03400 DNA repair and recombination proteins [BR:
bhv03400
]
BLHYD_01680 (rpoC)
Enzymes [BR:
bhv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BLHYD_01680 (rpoC)
Transcription machinery [BR:
bhv03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BLHYD_01680 (rpoC)
DNA repair and recombination proteins [BR:
bhv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BLHYD_01680 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RPOC_hybrid
Apocytochr_F_C
Motif
Other DBs
NCBI-ProteinID:
WPX82194
LinkDB
All DBs
Position
174153..177836
Genome browser
AA seq
1227 aa
AA seq
DB search
MAEMNNNETYQPMTFDAIKIGLASPEKIREWSRGEVLKPETINYRTLKPEKDGLFCERIF
GPSKDWECHCGKYKKIRYKGVVCDRCGVEVTKASVRRERMGHIELAAPVSHIWYFKGIPS
RMGLILDLSPRTLEKVLYFANYIVLDPAGSGLQYKQVLTEREYQDARESYGYSFRVGMGA
EAIKELLESIDLEKESVELKKGLKESTGQKRARIVKRLEVVESFRESGNRPEWMVMTVIP
VIPPDLRPMVQLDGGRFATSDLNDLYRRIINRNNRLKRLLELGAPDIIIRNEKRMLQEAV
DALIDNGRRGRPVTGPGNRALKSLSDMLKGKSGRFRQNLLGKRVDYSGRSVIVVGPELKI
YQCGLPKEMAIELFKPFVMKELVSNGTAHNIKSAKKMVEKLEPAVWDVLEEVIKEHPVML
NRAPTLHRLGIQAFEPILVEGKAIKLHPLVCTAFNADFDGDQMAVHLPLSVEAQAECRFL
LLSPNNLLKPSDGGPVAVPSQDMVLGIYYLTQERPGYKGEGKYFRSVNEAILAYENDAIT
LQSKIKVRCTKTMPDGEEVTGVVESTLGRFLFNEILPQDLGFVDRSVPGNELLLEVDFHV
GKKGLKQILEKVINTHGATKTAEVLDDIKSMGYKYSTRAAMTVSISDMTVPPQKPELIKK
AQDTVDLITKNYKRGLITEEERYKEVVETWKETDDVLTHALLSGLDKYNNIFMMADSGAR
GSDKQIKQLAGMRGLMADTTGHTIELPIKSNFREGLDVLEYFMSAHGARKGLSDTALRTA
DSGYLTRRLVDVSQDLIVRESDCCEGKGEIPGMYVKAFMDGKEEIESLEERITGRYSCET
ICNKDGEVLVKANHMITPKRAARIMKEGVSNETGGAIDRVKIRTILTCRCKVGICAKCYG
ANMATGESVQVGESVGIIAAQSIGEPGTQLTMRTFHTGGVAGGDITQGLPRVEELFEARK
PKGLAIITEIKGVATISDTKKKREITVNDVETGNSKTYLIPYGSRIKVMDGQVLEAGDEL
TEGSVNPHDILKIKGVRAVQDYMIQEVQRVYRLQGVEINDKHIEVIVRQMLKKIRIENNG
DTDFLPGTLVDVLDFEEVNAQKEEEGLEPAEGKQVMLGITKASLATNSFLSAASFQETTK
VLTEAAIKGKVDPLIGLKENVIIGKLIPAGTGMKRYSQVKLDTDEQLVAQATEEEELSEL
EDVELEISEISDESTVQTEPEEILTEE
NT seq
3684 nt
NT seq
+upstream
nt +downstream
nt
atggcagaaatgaacaacaatgaaacctatcagccaatgactttcgatgccatcaaaatc
ggactggcgtcccctgagaaaatcagagagtggtcaagaggcgaggtgttaaaaccggaa
accattaactatagaactctgaagccagaaaaagatggattgttctgtgagcgtatcttc
ggacccagcaaggactgggagtgtcactgtgggaaatataagaagattcgctacaaaggt
gtcgtctgcgatcgctgtggagtggaagttaccaaagcaagcgttcgccgtgagcgtatg
gggcacattgagctggctgctcctgtctctcatatctggtattttaaaggaattccttcc
cgcatgggattgattttggacttatctccgagaactttggagaaagtgttgtattttgca
aactacattgtactggacccggcaggttccgggcttcagtacaagcaggtgctgactgaa
cgtgagtatcaggatgccagagaatcctacggctacagcttccgtgtaggaatgggcgct
gaggcgatcaaggagcttctggagagtattgatctggagaaagagtccgtagaattaaaa
aaaggtttaaaagagtccacaggacagaagcgggcgagaatcgtcaagagactggaagtc
gtagagtccttccgggaatccggcaaccgccctgagtggatggtgatgacggtaatccca
gtgattccaccggatctgcgtccgatggttcagctggacggtggaagatttgcaacttcc
gacctgaacgacttataccgcagaattatcaaccgcaacaatcgtctgaaacgtttattg
gagttgggagcaccggatatcattatcagaaatgagaaacgtatgctccaggaggcagtg
gatgcactgattgacaacggacgccgtggtcgtccagtcacaggtcctggaaaccgtgcg
ctgaaatcactttctgatatgttgaaaggtaaatccggacgtttccgtcagaacctgttg
ggtaaacgtgtggactattccggacgttcggttatcgttgtaggaccagagctgaagatt
tatcagtgtggtttgccaaaagaaatggcaatcgagctgttcaaaccgtttgtcatgaag
gagctggtgtctaatggcactgctcacaatataaagagtgccaagaaaatggtggagaag
ctggagccggcagtatgggatgttctggaagaggtaattaaagagcatccggttatgttg
aaccgtgcccctactttgcatcgtctgggaattcaggcgtttgagccaattttggtagaa
ggtaaggcgatcaagctgcatcctctggtttgtactgcgttcaacgcagactttgacggc
gaccagatggcagttcatcttccgctgtccgtggaggctcaagcagagtgccgtttcctg
ctgttgtctccgaacaacctgttgaagccgtctgacggcggtccggtggcggttccttca
caggatatggtgctcggtatctactatctgacccaggagagaccaggctataagggagaa
ggaaaatacttccgcagcgtcaatgaggcaattttggcttacgagaacgatgcgatcacc
cttcagtctaagattaaagtgcgctgtacaaagactatgccagatggagaggaagtcaca
ggagttgtcgagtctactttgggacgtttcctgtttaatgagattcttcctcaagattta
ggctttgtggacagaagcgttcctggaaatgagttgctcctggaagtggacttccatgtg
ggtaaaaagggtctgaaacagattctggaaaaggttatcaatacacatggtgcaaccaag
actgctgaggttttggacgatattaaatccatgggttataaatattccacgagagcggcc
atgactgtgtctatttctgatatgaccgtgccaccacagaagccggagctgattaagaaa
gctcaggatacggtggacttgattacgaagaactacaagcgtggtttgattaccgaggaa
gagcgttacaaggaggtcgtggagacttggaaagagacagacgatgtgttgactcacgct
ttgctgtccggtttggataagtataacaacatctttatgatggcggattcaggagcccgt
ggttctgacaaacagattaaacagctggcaggtatgcgtggattgatggctgatacgacc
ggtcacaccatcgagctgccgatcaaatccaacttccgtgaaggtttggacgtattggag
tactttatgtccgcccatggagcccgtaaaggtctgtccgacaccgcgcttcgtaccgct
gactccggttatctgaccagacgtctggtggatgtctctcaggacttgattgttcgtgag
tctgactgctgtgagggcaagggagagattccaggtatgtatgtgaaggcattcatggac
ggcaaggaagagattgagagcctggaagagcgtatcaccggaagatattcttgtgagact
atctgcaacaaagacggagaggtcctcgtgaaagcgaaccatatgattacgccgaagcgt
gcggcccgcatcatgaaagagggcgtcagcaatgagactggcggtgccattgaccgcgtg
aagatccgtacgatccttacctgccgctgcaaggtgggaatctgcgcgaagtgttacgga
gccaacatggcgaccggagaatctgtacaggtcggagagtctgtaggtatcattgccgcg
cagtccatcggagagcctggtactcagctgaccatgcgtaccttccataccggaggtgtg
gccggcggagatatcacacagggtcttccccgtgtggaggagctgtttgaggccagaaag
ccgaagggtctcgcgattatcaccgagatcaagggtgtggctacgatcagtgatactaag
aaaaaacgtgagatcacagtcaacgatgtggaaactggaaattccaagacctatctgatt
ccttacggttccagaattaaggttatggacggccaggttctggaggccggcgacgagctg
acagaaggtagtgtaaatcctcatgacattctgaagattaagggtgtccgcgctgttcag
gattacatgatccaggaggtgcagcgtgtataccgccttcagggtgttgagatcaacgat
aagcatatcgaggtcattgtacgtcagatgctgaagaagattcgcatcgagaacaatgga
gacaccgatttcctgccgggtactctggtggatgtactagatttcgaagaagtaaacgcg
cagaaggaagaggaaggcttagaaccggcagagggcaagcaggtgatgttaggtatcacg
aaggcttccctggcgacaaattctttcctgtcagcggcgtccttccaggagactacgaag
gttctgacggaggcagcgattaaaggaaaggttgacccgttgatcggtctgaaagagaac
gtaatcatcggtaaactgattccggctggcacaggtatgaagcgttacagccaagtgaaa
ttagatacagatgagcagctcgtagctcaggcgaccgaggaggaagaactgagtgagctg
gaagatgtggagttggaaatcagcgagatttctgatgaatctacagttcagacagagccc
gaagagattctgacagaagaataa
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