Blautia hydrogenotrophica: BLHYD_11800
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Entry
BLHYD_11800 CDS
T09635
Symbol
recJ
Name
(GenBank) Single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
bhv
Blautia hydrogenotrophica
Pathway
bhv03410
Base excision repair
bhv03430
Mismatch repair
bhv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bhv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BLHYD_11800 (recJ)
03430 Mismatch repair
BLHYD_11800 (recJ)
03440 Homologous recombination
BLHYD_11800 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bhv03400
]
BLHYD_11800 (recJ)
DNA repair and recombination proteins [BR:
bhv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
BLHYD_11800 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
BLHYD_11800 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
BLHYD_11800 (recJ)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
CM1
DUF34_NIF3
Lymphostatin_VX-I
Motif
Other DBs
NCBI-ProteinID:
WPX83182
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All DBs
Position
1242026..1243744
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AA seq
572 aa
AA seq
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MREEKWVVSAKRADFQKIGQEYGIDPVIARLIRNREVQSSEQIDQYLNGKVEDLPSPWFF
KDMEKAVNLIEAKIRQRKLIRIIGDYDIDGVVSTYILLRGLDRLKAKVDTYIPDRVADGY
GIHLPLIEKALEDGIDTILTCDNGIAAYNEIVYAKERGLTVIVTDHHEVPFTKKADEKEE
VLPPADAIVNPKQRNCSYPNKNLCGAAVAYKLILALYERYGIPKAEGEEFIELAAIATVG
DVMDLQGENRVLVKEGLKRLENTWNLGLRELIRANGLEDKKITAYHIGFVIGPCLNASGR
LDTAARSLELLKSQDVKEAARLAGDLLAINQSRKALTAQGVKQAVEMVETTSLREDRVLV
VYLPDCHESLAGIIAGRLRERYYRPVLVLTKGEQCVKGSGRSIEAYSMFESLTECKELMI
QYGGHPMAAGLSMEEENVPRLRKQLNEKCKLTKEDLCPKITIDVAMPFSYIRRELVEQLD
LLEPFGKGNPKPVFAQKGVRVLGCRVFGQSRNVVKMQAVTEDGCGMDAVYFGEAEPFLDR
ASQNEPLSVTYYPAINRYQGREKLQVIIQNYR
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
atgagagaagaaaagtgggtagtctcggcaaagagagcagattttcaaaaaatcggacag
gaatacgggatagacccggtgatagccagactgattcgtaaccgtgaggtacaaagctcg
gagcagatagatcagtacttgaatgggaaagtggaagacttgccatcgccatggtttttt
aaggatatggagaaagctgtaaatcttatcgaagcgaaaatacggcaacgaaagttgatt
cgtattattggagactatgacattgacggtgtagtttctacttacatattgttgagagga
ctagatagactgaaggcaaaggtggatacctatatcccggaccgggtggctgatggatat
ggaatccatctgccgttgattgagaaggcattggaggatgggattgatacgatactgacc
tgtgacaatgggattgcggcttacaatgagattgtctatgccaaagagaggggactgacg
gtcatcgtcacagatcaccatgaagtaccttttacaaagaaggcagacgaaaaagaagaa
gtgcttccgccagcagacgcaattgtgaatccaaaacaacgcaattgttcttatccgaac
aagaatttgtgcggggcagcggtagcttataaattgattttggcattgtatgagcgttat
gggattccaaaggcagagggggaagaattcattgaacttgccgccattgccactgtgggc
gacgtgatggatttacaaggagaaaacagagtcttggtaaaagaaggattgaagagactg
gaaaacacttggaacttgggactgagggagctgatacgggccaatgggctggaagacaag
aaaattacagcctaccacatcggctttgtgataggtccgtgcctgaatgccagcggaagg
ctggacacggctgccagatctttggaattgctgaaatctcaggatgtgaaagaagctgct
cggctggctggtgatttgctggcgatcaatcagagccggaaagcgttgacagcacaaggg
gtgaaacaggctgtggagatggtggagacgacatcgctgagggaagaccgggtgctggtc
gtatatcttccagactgtcatgaaagtctggctggaattattgccggcagacttcgagag
cgttactaccgtccagtactggtactcaccaaaggggaacagtgtgtaaaaggttcgggg
cgttcgatagaggcctattctatgtttgagtccttgacagaatgtaaggagttgatgatt
cagtatggaggacatcctatggcagcggggttgtccatggaagaagaaaatgttccgagg
ctgaggaaacaattgaatgagaagtgcaaactgacaaaggaagatttatgtccgaaaatt
acgatagatgtggcaatgcccttttcttatatccgtcgggaactggtggaacagttagat
ttgttagagccctttggaaaagggaatccaaagccagtttttgcccaaaaaggggtaaga
gttttgggatgtcgtgtgtttggacagagccggaatgtagtgaaaatgcaggcggtgacg
gaagacggctgtgggatggacgcggtttattttggagaggccgaaccttttttggataga
gcttctcagaatgaaccgttgtcagtaacttattacccggcaataaaccgatatcaagga
agagagaagcttcaggtgattatacagaattaccggtga
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