Blautia hydrogenotrophica: BLHYD_24630
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Entry
BLHYD_24630 CDS
T09635
Symbol
topA
Name
(GenBank) DNA topoisomerase 1
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
bhv
Blautia hydrogenotrophica
Brite
KEGG Orthology (KO) [BR:
bhv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bhv03032
]
BLHYD_24630 (topA)
03400 DNA repair and recombination proteins [BR:
bhv03400
]
BLHYD_24630 (topA)
Enzymes [BR:
bhv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
BLHYD_24630 (topA)
DNA replication proteins [BR:
bhv03032
]
Prokaryotic type
DNA Topoisomerases
BLHYD_24630 (topA)
DNA repair and recombination proteins [BR:
bhv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
BLHYD_24630 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Toprim_4
Zn_ribbon_recom
Zn_ribbon_3
Zn_ribbon_GRF_2
Motif
Other DBs
NCBI-ProteinID:
WPX84446
LinkDB
All DBs
Position
complement(2547688..2549772)
Genome browser
AA seq
694 aa
AA seq
DB search
MAKYLVIVESPAKVKTIKKFLGSNYDVQASNGHVRDLPKSQMGIDTENDFELKYITIRGK
GELLTKLRKAAKKADKIYLATDPDREGEAISWHLTQALKVDDEKMQRITFNEITKTAVKS
SIKQARRLNMNLVEAQQARRVLDRLVGYSISPLLWVKVKRGLSAGRVQSVALRIIGDRED
EINSFIPEEYWDLEGEFQVEGEKKPLIAKFYGTKKKVQIQNKEQMDEILSELGQCSYEVA
EVKKGERHKNAPLPFTTSTLQQEAAKTLNFSTQKTMRLAQQLYEGIDIKGNGTVGVITYL
RTDSTRISEEADKAAREYIDSEYGKEYVAAVPKTSGSKQKIQDAHEAIRPTDITRTPLSL
KESLSRDQYRLYQLIWKRFTASRMSSAKYETTSVKISAGKYYFTVAASRIVFQGFQSVYS
QEEDVKKKENVLAKSLTKGMPLKLLKLQPEQHFTQPPAHYTEASLVKTLEELGIGRPSTY
APTITTIIKRRYISKENKNLYMTELGEVVNNIMKQAFPSIVDVNFTATMEGLLDCVEAGT
VQWKTVVRNFYPDLKKDVEIAEKELEQVKIEDEVTDVICEECGRNMVIKYGPHGRFLACP
GFPECRNTKPYYEKIGVPCPICGKDVVLKKTKKGRKYYGCEANPECEFMSWQKPSKEKCP
NCGSYMVEKGNKLVCSNETCGFVKKIQEEEPIKA
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaatatttggtgattgtggaatcacccgcaaaagttaagacgattaaaaaattt
ttgggaagcaattatgacgtacaggcttctaacgggcatgtaagagatctaccgaaaagt
cagatgggaattgatacagaaaatgactttgagttgaaatatatcacgatccggggaaaa
ggggaattgctgacaaagctgagaaaagcagcgaaaaaagcggataaaatttatctggcg
acggaccctgaccgggaaggggaggcgatatcctggcatttgacacaagccttaaaggtt
gacgacgaaaaaatgcagaggattaccttcaatgagatcacaaaaacagcggtaaaatct
tccataaaacaggcgcgcagactgaatatgaatctggtggaggctcagcaggccaggagg
gtgctggaccgactggtgggatacagtatcagtcctctgctatgggtgaaagtaaaaaga
ggtctgagtgcaggaagagtacagtcggtggctcttagaattatcggagatcgggaagat
gaaatcaattccttcatcccagaagagtactgggatttagaaggagagttccaggtggaa
ggcgagaagaaaccgctgatagccaagttttatggtacaaagaagaaggtacagattcag
aataaagaacagatggatgagattctgtctgagttaggacagtgttcctacgaggtagca
gaggtgaaaaaaggggagcggcacaaaaatgcaccgctgccgtttaccaccagtacattg
caacaggaagcggccaagacgctgaatttttctactcaaaagaccatgcgcttggctcaa
cagctgtatgaaggaattgacatcaagggaaatggcacagtgggcgttatcacatacctg
cgtacagattcaacccgaatttcagaagaggcggacaaagcagccagagaatatattgac
agtgagtatggaaaagagtatgtggcggcagtcccgaaaacctctggcagcaaacagaag
attcaggatgcccatgaggcaattcggcccacagatattaccaggacaccgttgtcttta
aaagaatcactctcgagggaccagtatcgtttatatcagttgatttggaagcgttttacg
gccagtcgtatgagcagtgcaaaatatgagacgacatccgttaagatatcagcaggtaag
tactattttacggttgctgcctccagaattgtctttcaaggcttccagtctgtgtacagt
caggaggaagacgtaaagaaaaaggagaatgttctggctaagagtctgacaaaaggcatg
ccgttgaagctgctgaagcttcagccggaacagcactttactcagccgccggcacattat
acggaagcatctttggttaagaccttagaagagttagggattggaaggcctagtacctat
gcgccaacaatcacgacgattatcaaacgacggtatatctccaaagagaataagaatctg
tatatgaccgagttgggagaagtggtgaataacatcatgaaacaggcatttcccagcatt
gtggatgtaaattttacagcgacgatggaggggcttttggactgtgtagaagcgggcaca
gtacagtggaagacggttgtcagaaacttctatccggatttgaaaaaagatgtggagatt
gcggaaaaagaattggagcaggtgaagattgaagatgaggtcacagatgtgatctgtgaa
gaatgtggaagaaatatggtgatcaaatatggaccccatggacgctttttggcctgccct
ggctttccagagtgccggaatacaaaaccttattatgaaaagattggagttccctgtcct
atatgtggaaaagacgtggttctgaaaaagaccaagaaaggacgtaagtattacggatgt
gaggcaaatccagagtgtgaatttatgtcctggcagaaaccttccaaagagaaatgccca
aattgcggaagctatatggttgagaagggcaataaattagtgtgtagtaatgagacttgt
ggatttgtgaaaaagatccaggaggaagaaccgataaaagcgtga
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