Blautia hydrogenotrophica: BLHYD_29730
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Entry
BLHYD_29730 CDS
T09635
Symbol
rho
Name
(GenBank) Transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
bhv
Blautia hydrogenotrophica
Pathway
bhv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bhv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BLHYD_29730 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bhv03021
]
BLHYD_29730 (rho)
03019 Messenger RNA biogenesis [BR:
bhv03019
]
BLHYD_29730 (rho)
Transcription machinery [BR:
bhv03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
BLHYD_29730 (rho)
Messenger RNA biogenesis [BR:
bhv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
BLHYD_29730 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
OB_RNB
Spore_III_AA
CSD
AAA_14
SAP
AAA_25
S1CSD-TOTE-2
AAA_22
AAA_24
AAA
NACHT
Motif
Other DBs
NCBI-ProteinID:
WPX84954
LinkDB
All DBs
Position
complement(3079151..3080605)
Genome browser
AA seq
484 aa
AA seq
DB search
MREKYESLSLSVLRDLAKARGLRGISTLKKADLIQKMLLEDEKEKIQSQEPGMKEEEGKQ
QQDEYVPSFDGQRSNENSRNLDHGRYGEGGRNYENGHNSERKPTLNNEVLDSGEKANGIL
EVLPDGYGFIRCENYLPGENDIYVSQSQIRKFNLKTGDIVQGNIRVNQGEKFRALLYVTS
VNGFHPNESVRRHNFEDMTPVFPNERLILERPGGSTAMRIVDLISPIGKGQRGMIVSPPK
AGKTTLLKDVAKSILRNNRRMHLIILLIDERPEEVTDIKEAIQGENVEVIYSTFDELPEH
HKRVSEMVVERARRLVEHKKDVTILLDSITRLARAYNLVIPPSGRTLSGGLDPAALHMPK
RFFGAARNMREGGSLTILATALVDTGSKMDDVIYEEFKGTGNMELVLDRKLQEKRVFPAI
DIQKSGTRREDLLLSREEQEAVYSMRKALNGMKAEDAVEQILNMFARTKNNSEFVQMIKK
QKFF
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgcgagaaaaatatgagtcactgtctcttagtgtactgcgtgatttagcgaaagcgcgg
ggattaagagggatttctacgttaaaaaaggcagatctgatacagaaaatgttactagaa
gatgaaaaagaaaaaatacagagtcaggaacccggcatgaaagaggaagaaggaaagcag
caacaagatgaatacgttccgtctttcgacggccagcgctcaaatgaaaatagccgaaat
ttagaccatgggcgttacggcgaaggcggcagaaattatgagaacggccataacagtgag
cgaaagcccactttaaacaatgaagttttagacagcggggagaaagcgaacggaatacta
gaagtgctgccggacggctatggttttattagatgcgaaaattatctgcctggggagaat
gatatttatgtctcacagtcacagatacgaaaatttaatttgaagacaggggatattgta
caggggaatatccgcgtaaatcagggggaaaagttccgggcgctgctttatgtgacatct
gtcaatggctttcatcctaacgagagtgtgaggcgtcacaatttcgaggacatgacgccg
gtatttcccaatgaaagactgatcttagaacgcccaggtggcagtactgccatgaggatt
gtagatttgattagtcctattggtaaggggcagaggggaatgattgtttcccccccaaag
gcaggaaagacgactttgctgaaagatgtggcgaagtcgattctgagaaacaacaggagg
atgcacttgattattctcctgattgatgagagaccagaagaggtaacagatatcaaggag
gcaattcaaggggagaacgtggaagttatctactccacttttgatgaactgccggaacat
cataaaagagtttcagagatggtggtggagcgtgcacgccgtcttgtggagcacaaaaag
gatgtgacgatactgctagacagtattacccgtcttgcgagggcttataacttagtgatt
ccgcccagcggaagaaccctgtctggtggtttggaccctgcggctcttcatatgccgaaa
cgattttttggagccgccagaaatatgagagagggaggcagcctgacgatactcgccact
gccttggtggacacggggagtaagatggacgacgtgatctacgaggagtttaaaggtact
ggaaacatggagttagtattggatcgcaagctgcaagagaaaagagttttccctgccatt
gatattcagaagtctggaaccagaagggaagatctgctgttgagtagagaagagcaggaa
gctgtctacagtatgagaaaagcgttaaatggaatgaaggcggaagacgcggtggaacag
attctgaatatgttcgcgaggacaaagaacaattcggaattcgttcagatgataaaaaaa
cagaaatttttctaa
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