KEGG   Bidens hawaiensis: 143529083
Entry
143529083         CDS       T11418                                 
Name
(RefSeq) protein RRP6-like 2
  KO
K12591  exosome complex exonuclease RRP6 [EC:3.1.13.-]
Organism
bhw  Bidens hawaiensis
Pathway
bhw03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:bhw00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    143529083
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bhw03019]
    143529083
Messenger RNA biogenesis [BR:bhw03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Exosome cofactors
     143529083
SSDB
Other DBs
NCBI-GeneID: 143529083
NCBI-ProteinID: XP_076881069
LinkDB
Position
Unknown
AA seq 856 aa
MDPRVTPDPQLQNPSRKANALKQFTSPTKTPNFASSISNLSNPSSTIPCNKDFHFYFNFD
EFKNPVQEIAKSSESILESIGSSAEQVSGKKQVNLLNFSDNDGVYDWLVNFNDELFERFD
ASVDELMKLRNKEEVKGVGVKNVVSDDGFQKGLVKDNKLGDSSSVKVVSRDGNAVGTPKA
KVPFHVASIRRPQDVYKILVNNDNQPFEHVCLQRSADGSRFIHPLENLSVMDFIDRTVSD
VEPVKPPPVESTSFKLVQDVKDLKELAAKLRDADEFAVDLEHNQYRSFQGLTCLMQISTR
TEDFIVDTLKLRVQIGPHLREVFKDPTKRKVLHGADRDIIWLQRDFGIYVCNMFDTGQAS
RVLKLERNSLEYLLRHFCDVAANKEYQNADWRLRPLTKEMLRYAREDTHYLLYIYDVMKR
RLLSLPKDPDCTEEPLVEVYQRSYNLCMQLYQKELMTKNSYLSIYGLHAADLSGQQLAIV
AGLCEWRDGIARSEDESTGYILPNKVLIEIAKQMPVTLGKLRHVLKSRLHYIERNLGAVV
SIIRHSMQNAVAFEPVAKKLKEEHIEMMAARNAKLNNGEEVAGESNSNVGEDDSFEKEVG
NFIVGANQSHKLDGSSGSRVSIEVQKKPSRAFGAMFGSTAGKRKFNSESKATEESKVEQI
KSSVSLPFRSFADKTEVSHPVVKERPSTPQEIPVLPLASEPVTDVIMLDSDSDIEEEEEK
PGNDEGSERKTEGENSVILLDSDSDCSDEEKDGNEGAVPLSGLSASSQKRVETANETKKS
NPGAEDGGSGGLVEVKPFDYAAATNEVRFGEDGSDGEKGGGGGRKESAGGESSGDFRLGR
RRQAFPSAGNRSSTFR
NT seq 2571 nt   +upstreamnt  +downstreamnt
atggatccacgggtcaccccagacccccaattacaaaacccatcacgcaaagcaaacgcc
ttgaagcaattcacatcacccaccaaaacccctaatttcgccagttcaatttcaaaccta
tcaaacccttcaagcaccatcccatgcaataaagactttcacttttacttcaatttcgac
gaattcaaaaacccagttcaggaaatagctaaatcttcagaatcgatactcgaatcgatc
ggatcgtccgccgagcaagtttcaggcaaaaaacaggtgaatttactaaattttagtgat
aatgatggagtttatgattggttggttaactttaatgatgagttgtttgaaagatttgat
gcttcggttgacgagttaatgaaattaaggaataaggaagaggtgaaaggggttggggtt
aagaatgtagttagtgatgatgggtttcagaaagggttagttaaggataataagttgggt
gattcgtcgtcggttaaagttgtttcgagagatgggaatgcggtggggacgccgaaggcg
aaagttccgtttcatgtagcgtcgattcggaggccgcaggatgtgtataagatactggtg
aataatgataatcagccgtttgaacatgtttgtttgcagaggagtgcggatgggtccagg
tttatacacccgttggagaatctttcagttatggattttattgataggacggtcagtgat
gtagagccggtaaaaccgcctccggttgaaagtacatctttcaagcttgtacaagatgta
aaggacttgaaggagttagctgctaaattgcgtgatgccgatgaatttgcggttgatttg
gaacacaatcaatatcgatcatttcaagggttaacgtgcttgatgcaaatatctacaaga
acagaagattttattgtggacacattgaaactacgggttcaaatcggcccgcatctacga
gaggttttcaaggatcctaccaaaagaaaggttttgcatggagctgatcgggatattata
tggctgcaacgtgactttggtatatatgtttgcaacatgtttgatactggacaggcatca
agggtgttaaagttggagaggaattctctagagtatctattgagacacttttgtgatgtc
gctgcaaataaggaataccaaaatgccgattggcgactgcggccgttgactaaagaaatg
ctgagatatgccagagaagacacacattatcttttgtatatatatgatgttatgaaaaga
aggctgctttcattaccaaaagaccctgactgcactgaagaaccacttgttgaggtatac
caacgcagttacaatctatgcatgcaactctatcagaaagaacttatgaccaagaactca
tatctaagcatttatgggttgcatgctgctgatctcagtggccagcaacttgccattgtt
gcaggactttgtgagtggagagatggtattgctcgttcagaagacgaaagtactggttat
atattgccaaacaaagttcttattgaaattgcaaagcaaatgccagttacactcggaaaa
ttacgccacgtattgaagtcgaggctccattacatcgagcgaaaccttggtgcggttgtt
agtataattaggcattcgatgcagaacgcggttgcatttgaacccgttgccaagaaattg
aaggaagaacacattgaaatgatggctgcaagaaatgctaaacttaataatggtgaagaa
gttgcaggtgaaagtaatagtaatgttggtgaagatgactcgtttgaaaaggaagttgga
aactttatcgttggagcgaatcaaagccataaattagatggatcttctggttcaagagta
agcatcgaggtacaaaagaaaccgagtcgtgcctttggagccatgtttggaagcacagca
ggaaagagaaagttcaattcagaatcaaaggctaccgaggagtctaaggttgaacagatc
aaatcttctgtgtcactcccattccgttctttcgctgataaaaccgaggtttcacatcct
gttgtgaaagaaagaccgtctacacctcaagaaataccggttttgcccctggcttctgaa
ccggtaaccgatgttatcatgctggattctgattctgatattgaggaggaagaggaaaaa
ccgggaaatgatgagggtagtgagcggaaaacggaaggtgaaaacagtgtgatattgttg
gattccgattccgattgttccgatgaagaaaaggatggaaacgagggggccgttccgctg
tcgggtctttcagcaagctcccagaagcgtgtagaaactgctaacgagacgaaaaagtca
aacccgggggcagaggatggtggttcaggcgggctcgtggaggtgaaaccgtttgactat
gcagcggctacgaatgaagtgcggttcggggaagacgggtcagatggggaaaagggcggt
ggtggtggtcggaaggaatcggctggtggtgaaagtagtggtgattttcggttgggtagg
cggcggcaggcttttccgtcggcaggtaaccggagttcaactttccggtga

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