Bidens hawaiensis: 143529084
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Entry
143529084 CDS
T11418
Name
(RefSeq) ubiquitin C-terminal hydrolase 12-like isoform X1
KO
K11838
ubiquitin carboxyl-terminal hydrolase 7 [EC:
3.4.19.12
]
Organism
bhw Bidens hawaiensis
Pathway
bhw03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
bhw00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
143529084
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
bhw01002
]
143529084
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bhw04121
]
143529084
Enzymes [BR:
bhw01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
143529084
Peptidases and inhibitors [BR:
bhw01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
143529084
Ubiquitin system [BR:
bhw04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
143529084
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
USP7_ICP0_bdg
UCH
USP7_C2
MATH_2
MATH
UCH_1
ubiquitin
SASP
DUF4911
Motif
Other DBs
NCBI-GeneID:
143529084
NCBI-ProteinID:
XP_076881070
LinkDB
All DBs
Position
Unknown
AA seq
1152 aa
AA seq
DB search
MTLITPQPLDQEDEEMLVPNTEMLDRSLPVQGPVAFDGTPPVEAPQPMEVVSTAENQATE
EPQASRFTWTIENFSRQTNKKLYSDVFVAGGHKWRVLIFPKGNNVDHLSMYLDVADSSTL
PYGWSRYAQFSLAVVNQIHNMFTVKKDTQHQFHARESDWGFTSFMALSDLYDPSRGYLVN
DTCIIEADVAVRKVIDYWSYDSKKETGYVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHM
PTTENDMPSGSIPLALQSLFYKLQYNETSVATKELTKSFGWDTYDSFMQHDVQELNRVLC
EKLEDKMKGTVVEGTIQKLFEGHHMNYIECINVDFKSTRKESFYDLQLDVKGCRDVYASF
DKYVEVERLEGDNKYHAEAHGLQVKSILVNDILPFIILGTGEVMFVSVQDAKKGVLFIDF
PPVLQLQLKRFEYDFTRDTMVKINDRYEFPLELDLDRENGKYLSPDADKSVRNLYTLHSV
LVHSGGVHGGHYYAFIRPTLSDQWFKFDDERVTKEDTKRALEEQYGGEEELPQTNPGYNN
APFKFTKYSNAYMLVYIRENDKDKIICDVDEKDIAEHLRIRLKKEQEEKENKRRYKAQAH
LYTIIKVARDANLLEQIGKDIYFDLVDHDKVHSFRIQKQTPFNQFKEEVAREFGVPVQFQ
RFWIWAKRQNHTYRPNRPLTALEESQSVGQLREVSSKNHNAELKLFLEIEIGPDLHPIPP
PDKSKDDILLFFKLYDPEKEELRYVGRFFVKSSGKPSEIILKLNERAGFGPDEEIELYEE
IKFEPCVMCERLDKRASFRTSQIEDGDIICFQKLPKADDKYRYPDVPSFLEYVKNRQIVH
FRSLDRPKEDDFCLELSKLHTYDDVVERVAQYLNLDDPSKIRLTPHNCYSQQPKPHPIKY
RVAEHLLDMLVHYNQVSDILYYEVLDIPLPELQCLKTLKVAFHHANKEEPVIHNIRLPKQ
STVGDVLNEIKSKVTLSHPDAELRLLEVFYHKIYKIFPLTEKIENINDQYWTLRAEEIPE
EEKNLGPQDRLIHVYHFTKEAAQNQMQVQNFGEPFFLIIHENETLADVKVRIQKKLQVPD
EEFSKWKFAFLSLGRPDYLQDSDVVSNRFQRRDVYGAWEQYLGLEHSDTTPKRSFTANQN
RHTYEKPVKIYN
NT seq
3459 nt
NT seq
+upstream
nt +downstream
nt
atgactctcatcactccacagccgctagatcaggaagacgaggagatgctcgtgccgaac
accgagatgctggaccggtctttaccggtgcaaggtccggttgcgttcgatggtactcca
cccgttgaagctcctcagcctatggaagttgttagcacagcagagaatcaagcaactgag
gagcctcaggcgtctaggtttacatggactattgagaatttctcgcgtcagacgaacaaa
aagctttattctgatgtctttgtagccggtggtcataaatggcgggtgcttatatttcca
aagggaaacaatgtggatcatttgtccatgtacttagatgtagctgattcctcgacatta
ccttatggttggagtagatatgctcagttcagcttggcagttgttaatcaaattcacaac
atgttcactgtaaagaaagacacacagcaccagttccatgcaagggagagtgactggggg
ttcacatctttcatggctcttagtgatttatatgacccgagtagagggtatcttgtaaac
gacacatgcattattgaagctgatgtggctgtaagaaaagtgatcgactattggtcatat
gactcaaagaaggaaaccggttatgttggtcttaagaaccaaggagcaacgtgttacatg
aactctcttcttcaaaccttgtatcacatcccttactttagaaaggctgtctaccatatg
ccaacaacagaaaatgatatgccttcaggaagtattcctttagctcttcagagcttattc
tataaactccagtacaatgaaaccagtgttgccacaaaagaattgacaaaatcttttgga
tgggacacatatgactcttttatgcagcatgatgtgcaagaacttaatagggttttgtgt
gagaagcttgaagacaagatgaagggaacagttgtggaagggacaatacagaagttattt
gaaggacaccatatgaactacattgagtgcatcaatgtggatttcaaatcaacaagaaaa
gaatcgttttatgatcttcaacttgatgtgaaaggctgtcgggatgtttatgcttctttt
gacaaatatgttgaagtggaacgacttgagggtgacaataagtaccatgctgaagcacat
gggttacaggttaaatcaatattggttaatgatattcttccatttattattttgggtact
ggtgaagttatgtttgtttcggttcaggatgctaagaagggtgtgctatttattgatttc
ccacctgttcttcaactccagctaaaacgtttcgaatatgatttcacaagggatacaatg
gtaaagataaatgatcggtatgaatttccactagaacttgaccttgacagagagaatggc
aagtatttatctcctgatgccgataagagtgtccggaatctctatacgcttcacagtgta
ttggttcatagtggcggtgtgcatggtggacattattatgcatttatcaggccaactctg
tcagaccagtggttcaagtttgatgatgaaagagttacaaaagaagatacgaagagggcg
ttagaagagcagtatggtggtgaggaagagctaccccaaacaaatcccggttacaataac
gctccgtttaaatttacaaaatactcaaatgcctacatgcttgtctacatacgggaaaac
gataaagataaaattatttgtgacgttgatgagaaggatattgcagaacatcttaggata
agattgaagaaagaacaagaagagaaggaaaacaagagaagatataaagcacaggctcat
ctttatacaattattaaggttgctcgtgatgcaaaccttttagaacagataggaaaggat
atatattttgatcttgttgaccatgacaaagttcatagctttcgtatacagaaacaaacc
ccatttaaccaattcaaggaggaggttgctagagaatttggtgtgcctgttcaatttcaa
cggttctggatatgggcaaagaggcagaaccacacataccgtcccaatcggcctttaact
gctctggaggaatcccagtcggttggccaattgagggaagtttctagtaagaatcacaat
gctgaactcaaattattcttggagatcgagattggaccggatttgcatcctattccacca
cctgacaaaagcaaagatgatatacttctcttcttcaaactttatgatcccgagaaggaa
gaactcagatacgttggtagattctttgtgaagagttctggtaagcctagtgaaattata
ttaaaactaaacgagagagctggatttggtccagatgaagaaattgaactctatgaggaa
atcaaatttgaaccatgtgtcatgtgtgaacgcctcgacaaaagagcctcatttagaact
agccagatcgaagacggagacattatttgcttccagaaacttcctaaagctgatgacaaa
taccggtaccctgacgtcccttcatttctagaatatgtgaaaaaccgtcagatagttcat
tttcggtctctggatagacccaaggaagatgacttctgtcttgaactgtcaaagttgcat
acatacgatgatgtagtggagagagttgctcagtatcttaatctggatgacccgtcaaaa
attagactcacccctcacaactgttattctcaacaacccaaacctcaccccatcaagtac
cgcgttgcagaacacctgttagatatgctggttcactacaaccaggtttctgatattcta
tattatgaagtgttggacattcctctgcctgaattacaatgtttgaaaactttgaaagtt
gcgtttcaccatgcaaacaaggaagagcctgtaatacacaatataaggttgcctaaacag
agcactgttggagatgttcttaatgaaataaagtcaaaggtcacattatctcatccagat
gctgaacttagacttcttgaagtgttttaccataagatttacaagatctttccgcttact
gagaagattgagaatataaatgatcaatactggacattacgtgctgaagaaattccagag
gaagaaaagaaccttgggccgcaggatcgcttgattcatgtttaccattttactaaagag
gctgcacagaaccagatgcaagttcagaactttggggagccgttctttctgataattcat
gaaaacgaaactttagcagacgttaaagtccgaattcaaaagaagttacaagttccagat
gaggagttttctaagtggaagtttgcatttttatccttgggacgtcccgactatctacaa
gattcagatgttgtatctaaccgttttcagagaagggatgtgtatggtgcgtgggagcag
tatcttggattggaacattcggacaccacccctaaaagatccttcacggctaatcagaac
cgtcacacgtatgagaagccggtgaaaatatataactag
DBGET
integrated database retrieval system
