Bidens hawaiensis: 143530316
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Entry
143530316 CDS
T11418
Name
(RefSeq) uncharacterized protein LOC143530316 isoform X1
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
bhw Bidens hawaiensis
Pathway
bhw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bhw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
143530316
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bhw03019
]
143530316
Messenger RNA biogenesis [BR:
bhw03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
143530316
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
143530316
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
DUF5965
Motif
Other DBs
NCBI-GeneID:
143530316
NCBI-ProteinID:
XP_076881994
LinkDB
All DBs
Position
Unknown
AA seq
831 aa
AA seq
DB search
MGASRKLQGEIDRVLKKVQEGVDVFDSIWNKVYDTDNANQKEKFEADLKKEIKKLQRYRD
QIKTWIQSSEIKDKKVSASYEQALMDARKLIEREMERFKICEKETKTKAFSKEGLGQQPK
TDPKEKAKSDTRDWLNNTVSELESQIDSFEAEMEGLSVKKGKAKPPRLTHLESSITRHKA
HIMKLELILRLLDNDELSPEQVNDVKEFIDDYVERNQEDFDEFEDVDMLYNSLSLDMVDA
LEDLVSIVPPSLVKGVGATGAALSMKNVVSSPSVQSSVVASVQDQVEETVSQDNSSDHGP
KTPAPKTSAIMSSSPTPAGSHATTPVAVAASSILPGQSPVRGILDNTPSAVPSSPVNKEE
EVGGFPGRKASPAFNLGRGGLTPQPSVTTSSNIPTNIVSPSVSERVGGMVHGSPVSSLSN
RMMMSQGGAKTSDGGDNGSGGDASGMTPRVYSPSGLQWRPGSPFQNQHDGARARPEIAPD
QREKFLQRFQQVQQQTQNNNTLLNMPPISGNHKQFPGQQSPLLQQINSQSSTVLPQGGLS
GALSAGSNNVTSAQQPSLIHLQAGQQTFMPAGSKDAEIGNAKTDDMEQQQSLVDDSAADP
AQTAELNKNAASEEDTKASYALDSKVSDVDLSPGQPLQPNQSGTLGVIGRRSLSDLGAVG
DNLGGLAVNLGGTHDQQYNLQMLEAAFYKLPQPRDSERAKSYTARHPAVTPQSYPQVQAP
IVNNPAFWDRLGSDNIGTDTLFFAFYYQQNTYQQYLAAKELKKQSWRYHKKYNTWFQRHE
EPKFATDDFEQGTYVYFDFHIGNDEMQNGWCQRIKTDFKFEYNFLEDELIV
NT seq
2496 nt
NT seq
+upstream
nt +downstream
nt
atgggagccagtagaaagcttcaaggcgagatcgatcgagtgttgaagaaagtgcaagaa
ggcgttgatgttttcgacagcatatggaacaaggtttacgatacggataatgcgaatcag
aaggagaagtttgaggcggatttgaagaaggagattaagaagctgcagaggtatagagat
cagattaagacatggattcagtccagtgaaatcaaggataaaaaggttagtgcctcttat
gagcaggctttaatggatgcacgcaagcttattgagcgtgaaatggaacggtttaagatt
tgtgaaaaggagacaaagacaaaagccttttccaaggaaggcctgggacagcaacctaaa
acagatccaaaggagaaagccaagtcagacactagagactggttgaacaatacggtgtct
gagctggaatctcaaattgatagctttgaagctgagatggaggggctgtccgttaagaaa
ggaaaggcaaaacctcctagactgacgcatttagaatcatcaattactcggcacaaggct
catataatgaagctagagttaatattgaggctgctagataatgacgaattgagtcctgag
caagtcaatgacgtgaaggaattcattgatgattatgtggaaagaaatcaggaggatttt
gatgaatttgaggatgttgatatgctatacaactccttatcgttggacatggtagatgca
ctagaagatctggtttccattgtgccacctagccttgttaagggtgttggtgctactggt
gctgctctaagtatgaaaaatgtcgtgtcttcaccttctgttcagtcatcggtggttgct
tctgttcaagatcaagtagaggaaaccgtgtctcaagacaacagttcagatcatgggcca
aagacaccagctccaaaaaccagtgcaatcatgtcttcttctccaacaccagctggcagt
catgcaaccacccctgttgctgttgctgcttcttcaatccttccaggtcaaagtcctgtc
aggggtattttagacaatacaccctccgccgttccttcttcacctgtaaacaaggaagaa
gaagttggtggatttcctggtcgtaaagcatctccagctttcaatcttggtagaggtggt
ttgaccccccaaccttcagttactaccagtagtaatattcccaccaacattgtttctcct
tcagtttctgagagagttggtggcatggtgcacgggtcaccagtttcatctttgagtaac
agaatgatgatgtcacaaggtggagctaaaaccagtgatggcggtgataatggcagtggc
ggtgatgctagcggtatgacacccagagtctactcaccttctggattacaatggaggccc
ggtagtccttttcaaaatcagcatgacggggcacgtgctagacccgaaattgcaccagat
cagagagagaagtttttgcagcggtttcaacaagtgcagcaacaaactcagaataataat
actcttcttaacatgcctcctatttctggaaaccataagcaattcccaggacagcagagt
cctcttttgcaacagatcaattctcaaagttcaacagtgttgccccaaggtggattaagt
ggagcattgtcagcaggttctaacaatgttacatctgcacaacaaccaagtttgattcat
ttgcaggctggtcaacaaacgtttatgcctgcaggatctaaagatgctgaaattggcaat
gcaaagactgatgacatggagcaacagcaaagcctggttgatgactcagctgctgatcct
gctcaaactgctgaacttaacaagaatgctgctagtgaggaagatacaaaggcgtcatat
gcattagattcaaaggtgtctgatgttgacctctcacctggtcagcctttacaaccgaac
caatctggcacccttggtgttattggtagaagaagcctttctgaccttggtgcagttgga
gacaaccttggtggcttagctgtcaacttaggtggtactcatgatcagcaatacaatcta
cagatgcttgaagctgccttctacaaacttccccaaccacgagactctgaaagagccaag
agttacactgcaagacaccctgctgtgacccctcaaagctatcctcaagtacaagctcca
attgtgaataatcccgccttttgggatcgtcttggatctgataatattggaaccgatacc
ttattttttgcattctactatcagcagaacacttatcaacagtatttagctgcaaaagag
ttaaagaagcaatcatggaggtaccataaaaagtacaacacttggtttcaacgacatgag
gaaccgaaatttgcaaccgatgattttgaacagggaacgtatgtgtacttcgattttcat
attggcaatgatgagatgcaaaatggatggtgtcagagaatcaagacggatttcaagttt
gagtacaactttctggaagacgagctgattgtgtaa
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