Bidens hawaiensis: 143532489
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Entry
143532489 CDS
T11418
Name
(RefSeq) protein PAT1 homolog 1-like
KO
K12617
DNA topoisomerase 2-associated protein PAT1
Organism
bhw Bidens hawaiensis
Pathway
bhw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bhw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
143532489
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bhw03019
]
143532489
Messenger RNA biogenesis [BR:
bhw03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
143532489
mRNA degradation factors
5'-3' decay
Decapping complex
143532489
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
143532489
NCBI-ProteinID:
XP_076883641
LinkDB
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Position
Unknown
AA seq
756 aa
AA seq
DB search
MQRSGTNTNTNIAASLSSNEKVFDAYQYAFFGQDILDKADDFGCLEVEEEDKPLNGPGDD
EYRLFDRDEESGVGSLSELDDLSTIFSKLNRTVSGPRHPGVIGDRGSGSGSFSRESSSAS
EWLQEITDWVDQHDAENYQGNRRWSSQPHLHSDSKPLYRATSYPQEQLQFFREPGLVPDP
SFSLPHQHSHLLNLSPTITNPQLSFLDNNSSLQLTGGLYRSQGYYGSGSHLIPPGLSRYS
HPQNNWAGQMLHVDHAGLLSNTFQQKLLHNGSLTPHFMSPHHHPISPFSPQLYPLPSRPL
HLSNQKTKQTQKSGSVRHGGSGRLSRQGSDGGNKKSDKFKVNFSSKYMNSEEIESILKLQ
HAATHSNDPYIDDYYHQARVAKSSDSKSKNRFCPAHFKDSPSNSKSSRNSTESKNNISID
ALGRVSLPFIRRPQPLLEVDPPAGTEVKPPGKSLEQEPMFSARIMVEDCLCVLLDVDDID
RLLQFNLPQDNGVQMRQRRQILLEGLATSLQLVDPLGKKSKSVELTPKDDIVFLRIVSLP
KGQKLISKYLKVLSPKSELARVVCMTVSRHLRYLFGGLPSDREASLTVSGLVKTVSICIG
SMDLNSLSACLAAVVCSPEQPPLRPLGSPSGDRASVLLKAVLDRATQLLSNPQGLTDPGL
QNPKLWQASFDAFFGLLTKYCLSKYDSLVKAMCTRGPPSTEAAGAISREMPVELLRASLP
HTDNNQRKMLVNFSQRSMQVAGHRETVGQVNPESVR
NT seq
2271 nt
NT seq
+upstream
nt +downstream
nt
atgcagagatctggtaccaataccaacaccaacattgctgcttcattatcatcaaatgaa
aaagtctttgatgcatatcaatatgcgtttttcggtcaagatattttggataaggctgat
gattttggttgtttggaagttgaagaagaagataagcctctgaatggacctggagacgat
gaataccgtttgtttgatagagacgaggaatcaggggttgggtctctatcagaattagat
gatctgtctactatattctcaaagttaaacagaacagttagtgggcccaggcatcctggc
gttattggtgaccgagggtcaggatctggctctttttcaagggaaagttcctctgcttct
gaatggttacaagaaattaccgattgggtggatcaacatgacgctgaaaactaccaagga
aacagaagatggtcatcacaaccgcatcttcactctgattcaaagccactatacagagcc
acatcgtaccctcaagaacaacttcaattcttcagggaacctggtttagtacccgacccg
tcattctccttgccacatcagcattcacatcttctgaatctttctcccaccatcactaac
cctcagttatccttcttagataataacagtagtctgcaattaactggcggtctttatcga
tctcagggttattacggaagtgggtcccacctaatccctcctggcctttcccgatactca
caccctcaaaacaactgggctggtcaaatgttacatgttgaccatgcgggtttattaagc
aacacttttcagcagaaattgcttcataacgggtcactaacgcctcattttatgtctcca
catcatcacccgattagtcctttctctcctcagctgtacccgctcccttctcgcccttta
catttaagtaatcagaaaaccaaacagactcaaaaaagcggtagcgttcggcatggtggc
agcggtcgtctttcccgccagggatctgatggcggtaataaaaaaagtgataaatttaag
gtgaattttagttccaaatatatgaattctgaagagattgagtctatacttaagttgcag
catgctgcaactcatagcaacgacccgtatatagacgattattatcaccaagcccgtgtt
gccaaaagttccgattcaaaatcaaaaaaccgtttctgtcccgctcattttaaagattca
ccatctaattctaaatcctcacgtaacagtacagaatctaaaaataatatcagtattgat
gctctaggaagggtatctcttccgtttattcgtaggccccagccgcttcttgaagttgac
ccgccagctggcactgaagtaaaaccacccgggaaatcattagaacaagaaccgatgttt
tctgccagaattatggttgaggactgcctttgtgttcttcttgatgtggatgacattgat
cggctcctgcagtttaacctgcctcaagataatggtgttcagatgagacagagaagacag
attcttctagaagggttggccacctcacttcagctcgttgacccgctcgggaaaaagtca
aagtcggttgagttaactcctaaggacgatattgtctttttacgaatagtgtctcttccc
aagggtcagaaacttatttcaaaatatctcaaagttctgtcaccgaagagtgagctggca
cgtgttgtatgcatgacagtttcccgtcatttaaggtatctatttggtggtcttccttct
gaccgtgaagcttctttgacggtttctggcctagttaaaacagtctcgatttgtatcggg
tcaatggatcttaattctctgagtgcttgtctagcagcagtagtgtgttctccagagcag
ccgccacttaggccactcgggagcccgtctggtgacagggcttcagttcttctcaaagcg
gttttggatcgggccactcagttgttaagtaatcctcaagggttgaccgaccctgggttg
caaaacccgaagctttggcaagcttcatttgatgcattttttgggctgcttacaaaatac
tgtttaagcaagtatgacagcttagtaaaagctatgtgtacacggggcccaccgagcaca
gaagcggctggagccatcagtagggaaatgccggttgagcttctgcgtgctagtctgcca
cacaccgataataatcagaggaagatgttggttaacttctcgcaacgatcaatgcaggtt
gccggtcatagggagactgttgggcaagtgaaccccgagtcggtgagatga
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