Bidens hawaiensis: 143532821
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Entry
143532821 CDS
T11418
Name
(RefSeq) E3 ubiquitin protein ligase RIN2-like
KO
K10636
E3 ubiquitin-protein ligase AMFR [EC:
2.3.2.36
]
Organism
bhw Bidens hawaiensis
Pathway
bhw04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
bhw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
143532821
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bhw04121
]
143532821
Enzymes [BR:
bhw01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.36 RING-type E3 ubiquitin transferase (cysteine targeting)
143532821
Ubiquitin system [BR:
bhw04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
143532821
Multi subunit type E3
ERAD complex
143532821
LMBR1L-GP78-UBAC2 complex
143532821
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_SYVN1_N
zf-RING_2
CUE
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-ANAPC11
zf-C3HC4_2
zf-C3HC4_3
zf-RING_11
zf-RING_5
zf-RING_16
zf-C3HC4_4
E3_UbLigase_EDD
zf_RING_Vps8_fungal
U-box_ZFPL1
PHD
RINGv
zf-RING_Vps41
zf-HC5HC2H
Kazal_1
Nucleoporin_N
zf_RING_Vps8
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
143532821
NCBI-ProteinID:
XP_076883874
LinkDB
All DBs
Position
Unknown
AA seq
575 aa
AA seq
DB search
MKLSLYPMGVGYVSVSAVCTVLSFIGLQYWSELSYVKLKSDGLMGESLLHPGVANRVLEL
LLSSYTTFALVVNFVLNIFMLIILCLKTIFFVELNAAESRKLVDRLVNYVIYKGTFLPLV
IPPTLVQAGLWSTWLTVLCSLKMFQALARDRLEWLNASPSATPWTYFRVYSVLLLVVTVD
AVWIRTCLLIYQQIPSSLFLLLFFEPLSIAFETLQAILVHGFQLLDVCLHHSAGNTTNSK
ISKLLDMSAAGSLWEWKSVILRNFDFVLDIMTLLMALGHYVYIWRLHGMTFHLVDAVLFL
NIRALLSAVAKRVRGFIKLRIALRTLHGALPDATSEEIQTYDDECAICREPMAKAKKLSC
NHLFHLSCLRSWLDQGLSDNYSCPTCRKPLFVNTREENAVPRSGDVSSDEQLARQLSSTL
EPQDVPTGVVPNQIQTPLGPESGWLGFDGSDPSTATRPAGLGRVQMMMRHLAAVGETYAQ
SALEDSSWNLWPINPSQASTSTSINPSTSSLRHRGHAGGPHVTTTPRVSDDDLSHLLAMA
ETVREVLPHVPDELILRDLQRTNSVSVSVNNLLHI
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atgaagttatccttgtatcccatgggtgtgggctatgtatcagtttcggcagtctgtaca
gtgttgagctttataggccttcaatactggtcggagctttcgtatgtgaagctgaagtca
gatggattgatgggtgaaagtcttcttcatcctggtgttgctaatcgagtacttgaactg
ttgttgagttcttataccacatttgcattggtagtcaattttgttctcaacatttttatg
ctcatcatcttgtgtcttaagacgatattttttgttgagttgaatgcggctgaatctcgg
aaattggtggaccgattagttaattatgttatctacaagggaacatttcttccattggta
atcccaccaacactagttcaagcaggattgtggtcaacatggctgactgtattgtgctct
ttgaagatgtttcaagcattagccagagatcgccttgaatggttgaacgcatctccttct
gcaactccatggacttacttccgtgtatattctgttttattactggttgtcactgtcgat
gcagtctggataagaacgtgcctactcatctaccaacaaataccatcatctctgtttttg
ttattattctttgaacctcttagtatagctttcgaaacacttcaggcgattttggttcat
ggctttcaactgctcgatgtatgtcttcatcactcagcaggcaacacaacaaattccaaa
atatcaaagcttttggacatgtcagcagcaggctcattgtgggaatggaagagtgttatt
ttaaggaattttgattttgttctagatattatgactttgttaatggctcttggtcattat
gtgtatatttggcggcttcatggcatgacattccatcttgtagatgcagttcttttccta
aatatacgtgctctgttaagtgcggttgcaaagcgcgtcagagggtttattaagttgagg
atagctttgagaacacttcatggggctctacctgacgcgacatctgaagagatacaaact
tatgatgatgaatgtgcaatttgtcgggaaccaatggccaaggcaaagaagctctcgtgt
aatcatctgtttcatctttcatgtctgagatcttggttagaccaaggtctaagtgacaat
tattcctgtcccacttgtcgaaaaccgctctttgtaaacacacgtgaagaaaatgctgta
cctcgttctggagacgtttctagtgacgaacaacttgcccgccagctaagctctacactt
gaaccccaagatgttcctacaggtgtagttccaaatcaaattcaaacccctttaggaccc
gaatcgggttggttggggttcgatgggtcagacccatctacagctacccgacccgcgggt
ttaggaagagtccagatgatgatgaggcatcttgcagctgttggtgaaacatatgcccaa
tctgcccttgaagattcttcatggaatctgtggcctataaacccgtctcaggctagcaca
tctacctcaatcaatccttccaccagtagtctaagacatcggggacatgctggtggtccc
cacgttacaactaccccgcgcgtttcagacgatgacctgtcacatttacttgcaatggcg
gaaactgttcgtgaagtgcttcctcatgtcccagatgaattaatattacgggatttgcag
cgaacaaattcggtttcggttagtgtgaataatcttcttcatatttga
DBGET
integrated database retrieval system
