Bidens hawaiensis: 143532906
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Entry
143532906 CDS
T11418
Name
(RefSeq) ruBisCO large subunit-binding protein subunit beta, chloroplastic-like
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
bhw Bidens hawaiensis
Pathway
bhw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bhw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
143532906
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bhw03019
]
143532906
03110 Chaperones and folding catalysts [BR:
bhw03110
]
143532906
03029 Mitochondrial biogenesis [BR:
bhw03029
]
143532906
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bhw04147
]
143532906
Enzymes [BR:
bhw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
143532906
Messenger RNA biogenesis [BR:
bhw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
143532906
Chaperones and folding catalysts [BR:
bhw03110
]
Heat shock proteins
HSP60 / Chaperonin
143532906
Mitochondrial biogenesis [BR:
bhw03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
143532906
Exosome [BR:
bhw04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
143532906
Exosomal proteins of other body fluids (saliva and urine)
143532906
Exosomal proteins of breast cancer cells
143532906
Exosomal proteins of colorectal cancer cells
143532906
Exosomal proteins of bladder cancer cells
143532906
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
143532906
NCBI-ProteinID:
XP_076883929
LinkDB
All DBs
Position
Unknown
AA seq
596 aa
AA seq
DB search
MASTFAGVTAVGSLASSNKLSSSASISSSPLGRRPNLALRRAPKTSQIKAAAKELYFNKD
GSAIKKLQIGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVDLEDPVENI
GAKLVRQAAAKTNDLAGDGTTTSVVLAQGLITEGVKVVAAGANPVLITRGIEKTTKALVA
ELKLISKEVEDSELVDVAAVSAGNNYEVGNMIAEAISKVGRKGVITLEEGKSAENSLYVV
EGMQFERGYISPYFVTDSEKMVAEYENCKLLLVDKKITNARDLISVLEDAIKNGYPILIM
AEDIEQEALATLVVNKLRGSLKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGITLD
KADSSVLGHAAKVVLSKDYTTIVGDGSTQEAVEKRVAQIRNLIEVAEQDYEKEKLNERIA
KLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVDEGIVVGGGCTLLRLASKVDAIN
ETLDNEEEKVGADIVKRALSYPLKLIAKNAGVNGSVVSEKVLANDNPRFGYNAATDKYED
LMTAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPVTVGTPMDNSGYGY
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgacttttgctggtgttactgcagtcggatcattggcttcttcaaacaaatta
tcatcttctgcttcaatatcttctagcccattgggccggagaccgaatcttgctctcaga
cgggctccaaaaacctcccaaatcaaagcagctgcaaaagaattgtactttaacaaagac
gggtcagccataaagaagctgcaaattggcgtaaacaaacttgcagatctagttggggtt
actctcggtcccaagggcagaaatgtcgttttagaaagcaaatatggtgctcccaagatt
gtgaatgatggtgttaccgttgctaaagaggttgacttggaagatccggtggagaatatt
ggggcaaaacttgttagacaagcggctgctaagaccaatgacttggcaggagatgggacc
acaacatcggtggttcttgcacagggtcttattacagaaggtgtcaaggttgtggctgcg
ggtgcaaatcctgttcttattaccagaggtattgagaagacgactaaagctttggtggct
gagcttaagttgatctcaaaagaggtggaagatagtgaactcgttgacgttgcggcagtt
agtgccggtaacaattatgaagttggaaacatgatagccgaagccataagtaaagtagga
cgaaagggtgtgataacccttgaagaaggaaaaagtgctgaaaacagtctttatgttgtt
gaaggcatgcaatttgagcgtggttacatctcaccttactttgtaactgatagcgagaaa
atggttgccgaatatgaaaactgcaagttattattggtggacaagaaaataacaaatgca
agagatcttattagtgtgttggaagatgctatcaagaatggatacccgatactcataatg
gccgaggatattgaacaagaagctttagcgacacttgttgtgaacaagcttcgaggttca
ttaaagatcgctgcacttaaagctcccggttttggggagagaaaaagccagtatcttgat
gacattgctatcttaaccggaggaactgttattagagacgaggtggggatcactttagac
aaagctgacagctctgtcttggggcatgctgccaaggtggttctctccaaggattatact
acaatagttggtgacgggagcactcaagaagcggttgaaaaacgcgtggcgcaaattaga
aaccttatcgaggtagccgagcaggattacgagaaggaaaaacttaacgagagaattgca
aaactctcgggtggtgttgcggtcattcaagttggagcacaaactgaaaccgagctgaag
gagaagaaacttagagtagaagatgctcttaatgctacaaaggctgctgtcgatgaaggt
attgttgtcggtggtggatgcactctgttgaggcttgcatctaaagttgatgctattaac
gaaaccctcgataatgaagaagaaaaggttggagccgatattgttaagagggctttaagt
taccctcttaaattgattgcaaagaatgcaggtgttaatggaagtgttgttagtgaaaag
gttttggccaatgataaccctagattcggatacaatgccgcaactgataaatatgaagat
ttaatgacagctggaatcatcgatccgactaaggtggtgagatgctgcctggagcatgct
tcatcagtggcgaaaacattcttgatgtcggattgcgttgtcgtagagattaaggaaccc
gagccggtcactgttggaaccccaatggacaattctggttatggatactaa
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