KEGG   Bidens hawaiensis: 143533235
Entry
143533235         CDS       T11418                                 
Name
(RefSeq) histone-binding protein MSI1-like
  KO
K10752  histone-binding protein RBBP4
Organism
bhw  Bidens hawaiensis
Pathway
bhw03082  ATP-dependent chromatin remodeling
bhw03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:bhw00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    143533235
   03083 Polycomb repressive complex
    143533235
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:bhw03036]
    143533235
Chromosome and associated proteins [BR:bhw03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    CAF-1
     143533235
  Histone modification proteins
   HAT complexes
    HATB complex
     143533235
   HDAC complexes
    Sin3A-HDAC complex
     143533235
   Polycomb repressive complex (PRC) and associated proteins
    PRC2.1
     143533235
    PRC2.2
     143533235
  Centromeric chromatin formation proteins
   Kinetochore proteins
    MIS16-MIS18 complex
     143533235
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    143533235
  Chromatin remodeling factors
   NuRD complex
    143533235
   NuRF complex
    143533235
   NuRF complex (fruit fly)
    143533235
SSDB
Motif
Pfam: Beta-prop_THOC3 WD40 Beta-prop_WDR5 CAF1C_H4-bd WD40_CDC20-Fz Beta-prop_WDR3_1st Beta-prop_IFT122_1st WD40_Prp19 Beta-prop_CAF1B_HIR1 Beta-prop_EIPR1 Beta-prop_RIG_2nd DSE1_N Beta-prop_EML_2 WDR55 Beta-prop_TEP1_2nd WD40_WDHD1_1st Beta-prop_WDR36-Utp21_1st EIF3I Beta-prop_WDR36-Utp21_2nd WD40_Gbeta Beta-prop_WDR3_2nd Beta-prop_Aladin WD40_RFWD3 Beta-prop_EML Beta-prop_WDR75_1st ANAPC4_WD40 WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd eIF2A CFAP251_N Beta-prop_NOL10_N Beta-prop_RIG_1st WDR90_beta-prop_4th NBCH_WD40 MIOS_WD40 WD40_MABP1-WDR62_1st PAC11 Beta-prop_WDR41 Beta-prop_WDR19_1st Beta-prop_NUP159_NUP214
Other DBs
NCBI-GeneID: 143533235
NCBI-ProteinID: XP_076884195
LinkDB
Position
Unknown
AA seq 423 aa
MVKDDDDMRGEMEERLINEEYKVWKKNTPFLYDLVITHALEWPSLTVEWLLERDEPAGKD
YSVQKLILGTHTSENEPNYLMLAQVQLPLEDAEYDARNYDDDRSDFGGFGGTNGKVQIIQ
QINHDGEVNRARYMPQNSFIIATKTVSAEVYVFDYSKHPSKPPLDGACNPDLRLRGHNTE
GYGLSWSKFKQGHLLSGSDDAQICLWDINGTPKNKSLDAMQIFKVHDGVVEDVAWHLRHE
YLFGSCGDDQYVHVWDLRSPSVTKPVQSVMAHQSEVNCLAFNPFNEWVLATGSTDKTVKL
FDLRKLNTALHTFDCHKEEVFQVGWNPENETILASCCLGRRLMVWDLSRIDQEQTPEDAE
DGPPELLFIHGGHTSKVSDFSWNPCEEWVVASVAEDNILQIWQMAENIYHDEDETPAEES
RGA
NT seq 1272 nt   +upstreamnt  +downstreamnt
atggtgaaagacgacgacgacatgcgtggcgagatggaagagcgtctgatcaacgaagaa
tacaaagtgtggaagaagaacactcctttcttatacgatctcgtcatcacccacgccctc
gagtggccttcactcaccgtcgagtggctgctggagcgagacgagcctgccgggaaagac
tactccgttcagaagctcatcctcgggacccacacctccgagaacgagcccaattacctg
atgctggctcaggtgcagttgccgcttgaagacgccgagtatgatgccaggaattatgac
gatgaccgctctgattttggtggattcggtggcaccaatggcaaggtacaaattattcag
caaataaaccatgacggagaggtgaacagggctcgttacatgcctcaaaactcctttata
attgctacaaaaaccgtcagtgcagaagtttatgtattcgattacagcaagcatccatct
aaacctcctctagatggagcatgcaatcctgatttgagactaaggggtcacaacactgag
ggatatggtttgtcatggagtaagtttaaacagggtcatcttcttagcggttccgatgat
gcacaaatttgcctttgggatattaatggaactcccaaaaataaatcacttgacgccatg
caaatatttaaagttcatgatggggttgtagaagacgttgcgtggcatttgaggcatgaa
tatttatttggttcgtgtggggatgatcaatatgtgcatgtgtgggatcttaggtctcca
tcggttactaagcccgttcagagtgtaatggctcaccaaagtgaagttaactgcttagct
tttaatccttttaacgaatgggttttggcaactgggtcaactgacaagaccgttaagttg
tttgacttacgaaagcttaacactgctctccatacatttgattgtcacaaggaggaagtg
ttccaggttggttggaatcctgagaacgagacaattttagcatcttgttgtcttggtcga
cgactcatggtgtgggatcttagcaggattgaccaagaacaaacaccagaggatgctgaa
gatgggccgccagagctgctgttcatacacggtggacacacaagtaaagtttctgatttt
tcttggaatccgtgtgaagaatgggtggtggcgagtgttgcggaggacaatattcttcaa
atctggcagatggctgagaacatctatcacgacgaggatgaaacacctgcagaggaatct
cgaggtgcttaa

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