KEGG   Bidens hawaiensis: 143533897
Entry
143533897         CDS       T11418                                 
Name
(RefSeq) DNA polymerase epsilon catalytic subunit A-like
  KO
K02324  DNA polymerase epsilon subunit 1 [EC:2.7.7.7]
Organism
bhw  Bidens hawaiensis
Pathway
bhw03030  DNA replication
bhw03410  Base excision repair
bhw03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:bhw00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    143533897
   03410 Base excision repair
    143533897
   03420 Nucleotide excision repair
    143533897
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:bhw03032]
    143533897
   03400 DNA repair and recombination proteins [BR:bhw03400]
    143533897
Enzymes [BR:bhw01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     143533897
DNA replication proteins [BR:bhw03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase epsilon complex
    143533897
DNA repair and recombination proteins [BR:bhw03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase epsilon complex
      143533897
SSDB
Motif
Pfam: DUF1744 POL2_thumb DNA_pol_B_exo1 DNA_pol_B zf_DPOE_2 zf-DPOE DNA_pol_B_exo2 RNase_H_2
Other DBs
NCBI-GeneID: 143533897
NCBI-ProteinID: XP_076884642
LinkDB
Position
Unknown
AA seq 2173 aa
MKDDNNNNRRRGGGDRSRDTKISKKQKLILSADEKLESKFGFDVFSEGGKRLGWLLSFTA
SSLEDQDTQNVYSCVDLYFVCQDGSTFKVKHKFRPYFYAATKDNMEMDVDAYLRRRYQGQ
IVDIQIVEKEDLDLKNHLSGLQKTYLKVSFDTVQQLFQVKNELMHVVERNKEKSNAAEAY
ESINATGKSKVRFQDCVDCITDLREYDVPYHVRFAIDNDIRSGLWYDVNVSSDGVTLERR
NDLLQRAEVHVCAFDIETTKLPLKFPDAEYDLVMMISYMVDGRGYLIINRECVGEDIEDL
EYTPKPEFEGHFKVTNVKNEEELIKLWFSHMREVKPGIYVTYNGDFFDWPFLESRAAHHG
LRMNEELGFLCDKVQGECRAKFACHLDCFAWVKRDSYLPQGSHGLKAVTKAKLGYDPLEV
NPEDMVRYAMEKPQMMASYSVSDAVSTYYLYMTYVHPFIFSLATIIPMTPDEVLRKGSGT
LCEMLLIVQAYTANVICPNKHQAESEKFHNNHLLESETYIGGHVECLETGVFRSDLPTSF
KLDPSAFKQLIENLDRDLHYAIEVEGKMDVKEVSNYDEVKNAILDKLIALRDEPTREECP
LIYHLDVAAMYPNIILTNRLQPPSIVTDEVCTACDFNRPGKTCLRNLEWVWRGETYTAKR
SDYYHIKRQIESEFVDGPQSKPFLDLSKVDQQLKLKDRLKKYCQKAYKRVLEKPTTEIRK
AGICMRENPFYVDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNPIKIQEAQDMVVLYDS
LQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNAHSLVKKIGRPLELDTDG
IWCALPGSFPENFTFRDSKKKLTISYPCVMLNVDVAVNNTNDQYQTLKDPINRTYTTHSE
CSIEFEVDGPYKAMILPASKEEGILLKKRYAVFNEDGTLAELKGFEIKRRGELKLIKVFQ
AELFEKFLHGSTLEECYSVVASVANRWLDLLDNQGKDIADSELLDYISESSTMSKSLVDY
GEQKSCAVTTARRLADFLGDAMVKDKGLRCQYVVACEPRGNPVSERAVPVAIFETDAELM
KFYLKKWCKISSDFGIRSIIDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLY
KKVREKEDKLRQRKMVDIFSAVNKENKDDMKNDANGENHEPNEQNVVDLEDFGTNGKSSG
VGPRPIVRSYETNHKTSGQQADNGQSGNLSASSPQPIDVDIEDIDKNLDYQGWLNSKKRK
WKQVRERRKRQRLETWDGSSQRNGATGIPSGVPNRRQAGSGVGSLFKRQEQALINSHWQI
IQLVPSSQNGQFLAWVVCSGTMHKILINVPRVFYLNSKAPVTEEFPGKLVNKSLPHAHHR
HNLIEVITDEDQFRKESRKLAAHLADPEVEGIYETKVELDFNFILQTGCVCKVNKSAKKR
NAKDGYSLSELQMKTTTECSYLESSISFFYLYHGISEPRGIYLLYFPSRSTIHVVMLSPV
QRKELTPHLLEKLFREACQALSVEPPMHRDAFTFKVDYVANPKDAQKILQREITEFRSEL
YGPAIAILECPNVGLMKYAVEALDDFPCVNIPSNARDSQYQALGWQNVAAKIGMRRCATS
SRWLNEKISLSRYSHVPLGNIEIDWRIQTTDIFFARELRDQKQMLWVSDNGIPDLGGDDE
EETCYFDEVNQPVLICEGAYRKVTVELKIHNLAVNALLLELDHDLTSASHELSDLDEATP
CVLAFRALRTLIQRCLTDAVSLGNIFADELLQHLYRWLCSPRSKLHDPALLRMLQKVMQK
VLALLLSEIRKLGASIIFANYSKVIIDTGKPDLSAAQAYCDTLLEILQKNNLFKCMVLEP
TQFWHSLLFMDQYNYGGVQPKSDQTDDDSEVAIASRWNIAENLPNETQDHFNLVVSEFLY
HPWEFAQDQANKRANVIDADSCTPSITAAAAESIQSCMTKHIQKEIIPDFTKRLMKIVAA
LYKGEKGKSHALEFIRHVCAVLALDQNVQDDIRIMKRNLLTLVHVREFAPEAQFQKCSIS
FTLPDVICSYCNDCRDIDLREDKALLTQEWRCSIPQCGQPYDREKMEYDLLQIARQRERV
YYLQDLVCLKCKQIKAAHLAEHCACAGTFALKENTTEFRGKMEVLLNIAVHQKFELLKEC
VAWILEVNLNTDN
NT seq 6522 nt   +upstreamnt  +downstreamnt
atgaaagatgataataataataatcgaagaagaggaggaggcgatcgcagcagagacacg
aagatctctaagaagcagaagctcattctctcagcggatgagaagctcgagtccaagttc
ggctttgatgtgttctccgaaggcggtaagcgtctcggatggctactctctttcaccgct
tcgtcgttggaggatcaggatacacagaatgtgtatagttgtgttgatttgtatttcgtc
tgtcaggatggttcgacgtttaaagtcaagcataagttcagaccttacttttatgctgct
acaaaggataatatggaaatggatgttgatgcatatttaagaagacgataccaagggcaa
attgtagacattcaaatagtggaaaaagaagaccttgatctaaaaaaccatctttctgga
ctacaaaaaacttacttaaaggtatcgtttgacacggtacaacaactttttcaagtaaag
aatgaactgatgcatgtggttgaaagaaataaagagaagtcaaatgctgcagaggcgtat
gagtccataaatgcaacaggaaaaagcaaagtgcgatttcaagattgtgtagattgcatt
accgatctaagggagtatgacgtgccttaccatgtccgttttgccattgacaatgatata
agatccgggctgtggtatgatgtaaatgtgtcaagtgatggagttactttagaaaggaga
aatgatcttctccaacgtgctgaagttcatgtttgtgcatttgatatagagaccacaaag
cttcctttgaaatttccagacgctgagtatgatttagttatgatgatctcatacatggtt
gatggtcgaggatatctgattattaatagagagtgcgttggtgaagatatagaggatctg
gaatatactccaaaacctgaatttgaaggacactttaaagtcacaaatgtgaagaacgag
gaagaactgatcaaattgtggttttctcatatgagagaggtgaagcctggtatttatgta
acatacaacggagacttctttgattggccattcttggaaagcagggcagctcatcatggg
ttgagaatgaatgaagagcttggctttctgtgtgacaaagttcaaggtgaatgtcgtgct
aaatttgcatgccatttggattgttttgcatgggtcaaacgtgatagttatctacctcaa
ggaagccatggtttgaaggctgtcacgaaagccaaactgggttatgaccccttggaggta
aatcctgaagatatggttcgttacgcaatggaaaagcctcagatgatggcatcctattca
gtatccgatgctgtgtcaacatactacttgtatatgacttatgttcatccctttatattc
tcccttgcaactataataccaatgactcctgatgaagtgttgcgtaaaggaagtgggacc
ctctgtgaaatgcttctcatagtccaggcatacacggcaaatgttatatgtcctaataag
caccaagctgaatctgaaaagttccataataatcatcttcttgagagtgagacatacatt
ggtggccatgtggagtgtttggaaactggtgttttcagatctgaccttccaactagtttt
aaacttgatccatctgctttcaagcaacttattgagaatcttgatcgtgatcttcattat
gctattgaagtagagggtaagatggacgttaaagaagtttcaaactatgatgaggtgaaa
aacgctattttggacaagcttatagcattacgagatgaacctacacgagaagaatgtccc
cttatataccatctagatgttgctgcaatgtatcccaacattattttgacaaacagactt
cagccaccatcaatagttacagatgaggtttgcacggcatgtgatttcaatcgtcctggt
aaaacttgtcttaggaatcttgaatgggtttggcgtggagaaacatacacagccaagaga
agtgattactatcatatcaagaggcaaattgaatctgagtttgtggatggaccccaatca
aaaccatttcttgatctgtctaaagtggaccaacagttgaagctgaaggatcgtctaaag
aaatactgtcaaaaggcatataagcgggtgcttgagaagcccaccactgaaattcgaaaa
gcagggatttgcatgcgtgaaaatccgttttatgttgatactgtacgaagcttccgtgat
agacgatatgagtacaaagggctcaataaagtatggaaagggaagctgtcagaagcaaaa
gctagtggaaatcctataaagattcaagaagcacaagatatggtggttctatatgattca
ctacaactcgctcacaaatgtattctgaattctttctatggatatgtcatgcgcaaaggt
gcacgttggtattcaatggaaatggcaggagtcgttacatataccggagcaaaaataatc
cagaatgctcattcacttgttaaaaagattggaagacctttggaattagatacagatggt
atatggtgtgctttgccagggtcattccctgaaaattttactttcagagactcaaagaag
aagctgacaatctcatatccatgtgttatgctcaatgttgatgtggctgtaaacaacaca
aatgatcaatatcagactctcaaagatcctatcaacagaacatacacaacacacagtgaa
tgttcaattgaatttgaagtggatggaccatacaaggctatgattcttcctgcttccaaa
gaagaaggaatattattaaagaagcggtatgctgtgtttaatgaagatggtacccttgcg
gagcttaaaggttttgagattaagaggaggggtgaattaaagctcattaaagtcttccaa
gccgagctcttcgaaaaatttcttcacgggtctaccttagaggaatgctattctgtagtt
gcttctgttgccaaccgctggcttgatcttcttgataatcaagggaaggatattgcagac
agtgaattgcttgattacatttcggaatcgagcactatgagcaagtctttagtggattat
ggtgagcagaaatcatgtgcagtaaccacagctagacgtcttgctgattttcttggtgat
gctatggttaaagataaaggcctacgttgccaatatgttgttgcatgtgaaccacggggg
aacccagtgagcgaacgtgctgttcctgttgctatatttgaaactgatgcagaacttatg
aagttctatttgaaaaagtggtgcaaaatctcatcagattttggtattcgttccattatt
gactggtcatattacaaacagcggcttagctctgctattcagaaaattatcactattcct
gcagcaatgcagaaggtttcaaaccctgttccaagagtagttcatcctgattggttgtac
aagaaggttcgtgaaaaagaggacaaattgaggcaaagaaaaatggttgatatttttagt
gcagtgaacaaggaaaataaagatgatatgaaaaatgatgcaaacggagaaaatcatgaa
ccgaatgaacagaacgttgtggatttggaggattttgggaccaatggaaaatcttctggt
gttggacctagacctattgttcgttcttatgaaactaaccataagacaagtggtcaacag
gctgataatggtcaaagtgggaatctgtcagcatcatcaccacaacctattgatgttgat
attgaagatatagacaaaaatctggattatcaaggatggcttaattcgaaaaaacgaaag
tggaaacaagttcgtgaaagaagaaagagacaaaggttggagacttgggatggatctagt
caaagaaatggagctactggtattcctagtggtgtgccaaataggagacaagctggatcc
ggggtcggttcgttattcaaaaggcaggaacaagcccttataaacagtcactggcagata
attcaacttgttccaagttcacaaaatggccaatttttggcgtgggttgtttgtagtgga
accatgcataagattcttattaatgttcccagagtattttacctaaattctaaagctcca
gtgactgaagagtttcctggaaaacttgtgaacaagagtcttcctcacgctcaccatcgc
cataacttgattgaggtcataactgatgaagatcagtttagaaaagaaagcaggaaactt
gctgctcaccttgcagatcctgaagtggagggtatatacgaaacaaaagtagagcttgat
ttcaacttcattcttcaaaccggatgtgtttgtaaagtgaataaatcagctaagaaacgg
aatgcaaaagatggatatagtttaagtgaattgcaaatgaaaaccactacggaatgctct
tacctagagtcatcaatttctttcttttacttgtatcatggcatatccgaaccgcggggt
atatatctattatattttccgtcaaggtcaaccattcatgtggtaatgctcagtcccgtt
cagcgtaaagagttgacaccacatctattagagaaactcttccgtgaagcttgccaagct
ttatcagtcgaacctcccatgcatagagatgctttcacttttaaggtggactatgttgca
aaccctaaggatgctcagaaaatcttacaaagagaaattactgaattcagatctgaactt
tatgggcctgcaattgctatacttgagtgcccaaatgttggcttaatgaagtacgctgtg
gaggctcttgacgatttcccgtgtgtgaacattccttcaaatgcacgcgatagtcaatat
caggctcttggctggcagaatgtagctgcaaaaattggaatgcgtcgttgtgccacatcg
tcccgttggttaaatgaaaaaatctctctttccagatattcccatgttccattaggcaat
attgaaatagattggcgtatacaaaccacagatatcttttttgcaagagaattacgtgac
cagaaacagatgctttgggtatcagataatggaattccagatcttggaggagatgatgaa
gaagaaacttgttactttgatgaggtcaatcaacctgttcttatttgtgagggtgcttac
cgaaaagtgacagttgagctaaagattcacaatctggctgttaatgctttgctattagag
ttagaccatgatttgacttctgcttcacacgaactgtcggatttggatgaggccacacca
tgtgtactcgcgtttcgtgccctccgaacattgattcagagatgccttactgatgctgtt
tcattaggcaatatatttgctgatgaattgttgcaacatttatacagatggctctgcagt
ccacggtcaaaacttcatgatccagctcttcttagaatgcttcagaaagtcatgcaaaag
gtgcttgcacttctgctatctgaaattagaaaattgggcgcctcgataatatttgccaat
tattcgaaagtgataatcgacaccggaaagccagacttatctgctgcgcaagcttactgt
gatactttactggaaattctacaaaaaaacaacttgtttaagtgcatggtgcttgaaccc
acacaattctggcattcactgctatttatggatcagtataactatggtggagttcaacct
aaatcagatcaaacggacgatgactcagaagtggcgatagcctcacgatggaatattgca
gaaaacctgcctaatgagactcaggatcactttaatttagtagtatcggagtttttgtac
cacccgtgggaatttgcacaagatcaagccaataaaagagcaaatgtaatagatgctgac
tcgtgcactccatcaattactgcagcagctgctgaaagtatccagtcatgcatgactaaa
cacatccagaaggagattatacctgacttcacaaaaagactaatgaaaatagttgctgct
ctttataagggagaaaaaggcaaatctcatgcacttgaattcattagacacgtgtgtgct
gtgcttgcactagaccagaatgtgcaggatgatattcggatcatgaagaggaatctgtta
acattagtgcatgtaagggagtttgctccagaggcacagtttcaaaagtgttcgatttcg
tttactctaccagatgtgatatgcagctactgcaatgattgtagagacatagacttgcgc
gaggacaaggctttactaactcaagaatggagatgcagtatcccacaatgtggtcaacct
tacgaccgcgagaagatggaatacgatcttcttcaaatagcgcgccaacgagagagggtt
tactatctacaagacttggtttgtctaaaatgcaagcagattaaagctgcacatttggca
gagcattgtgcgtgtgctggaacgtttgctcttaaggaaaacactaccgaatttagaggc
aaaatggaagtattgttgaatattgccgtgcatcaaaagtttgagttacttaaagaatgt
gttgcttggattctagaagtaaatttaaatacagataactga

DBGET integrated database retrieval system