Bidens hawaiensis: 143534262
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Entry
143534262 CDS
T11418
Name
(RefSeq) polygalacturonase-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
bhw Bidens hawaiensis
Pathway
bhw00040
Pentose and glucuronate interconversions
bhw01100
Metabolic pathways
Module
bhw_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
bhw00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
143534262
Enzymes [BR:
bhw01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
143534262
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Paralog
GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Beta_helix_3
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
143534262
NCBI-ProteinID:
XP_076884907
LinkDB
All DBs
Position
Unknown
AA seq
394 aa
AA seq
DB search
MKIIFLVIIALVSLSASAKVTYNVTSFGAKGNGNTDSTKAFFSAWSSACNSTKSAVIYVP
TGTYLLATAITFAGERCQSSSITIKIYGTLVAPFDYGAIAGSGDWIRFHRVNHLTISGGT
LDARGGSLWSCKTSGKSCPSGATTLGIYNSKNIVISGLKSVNSQMFHILLDACINAKLQG
VSISASGASPNTDGIHLISSTGVTILNSKIATGDDCISIGPGNSNLWIQGVACGPGHGIS
IGSLGWDLDEPGVQNITVSTATFRGTQNGVRIKTWARASHGFVTGATFQHLTMVNVSNPI
IIEQRYCPDKNNCPDQVSGVKIKDVVYEDIHGTSATQVAVKLDCSPGNPCSGIRLQDVNL
NYVRGNKPAVSSCAYAAGTASGILNPTSCLYLVS
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atgaagattattttccttgtgatcattgcacttgtctcattatcagcatcagcaaaggtt
acatacaatgtgacaagtttcggggctaaaggcaatggcaacacagactcgactaaggcg
tttttcagtgcgtggtcttctgcgtgtaattctacaaagtcggcggttatttatgttccc
actgggacttacctgcttgcaactgccatcacttttgctggtgaaagatgtcagagtagt
tcgattacgataaagatctatggtacacttgttgcgccttttgattatggcgcgattgct
ggttcgggtgactggattaggttccatagagtcaaccatttgaccatctcgggcgggacc
ctcgatgcccgaggtggttctctatggtcctgtaaaacctcgggcaaaagctgtccatcc
ggagctacgacactgggaatatacaactcaaagaacattgttataagcgggttaaaatca
gttaacagccaaatgttccacattctgttagatgcatgcatcaatgccaagctgcaagga
gtaagcatatcagcatccggtgccagcccgaacacggatggcatccatttaatatcatcg
accggtgtcaccatcttgaattctaaaatcgccacaggagatgattgtatatctataggc
cctgggaatagcaacctctggatccagggcgtggcgtgtggccctggtcatggcatcagc
attggaagtctaggttgggatttggatgaacccggtgtacagaacataactgtatcaacc
gcaacgtttagaggaactcagaacggcgtaagaataaaaacatgggcaagggctagccat
gggttcgtaacaggtgccactttccagcatttgaccatggtcaatgttagtaacccgatt
atcatcgagcaaaggtactgcccggacaaaaacaactgcccggatcaggtgtccggcgtt
aagatcaaggacgtggtgtacgaggatatccatggaacatcggccacgcaagtggcggtt
aaactggattgtagtccgggaaacccgtgcagtggaataaggttacaagatgtgaacctt
aactatgttcgtgggaataaacctgcggtgtcatcttgtgcgtacgctgctgggaccgcg
tctggcatacttaacccgacaagttgtctttatctagttagttag
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