Bidens hawaiensis: 143534862
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Entry
143534862 CDS
T11418
Name
(RefSeq) protein TORMOZ EMBRYO DEFECTIVE-like
KO
K14555
U3 small nucleolar RNA-associated protein 13
Organism
bhw Bidens hawaiensis
Pathway
bhw03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
bhw00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
143534862
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bhw03009
]
143534862
Ribosome biogenesis [BR:
bhw03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
143534862
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR3_1st
Beta-prop_WDR5
WD40
WD40_Prp19
Beta-prop_THOC3
Beta-prop_WDR3_2nd
WD40_WDHD1_1st
WD40_CDC20-Fz
Utp13
Beta-prop_EML_2
WD40_Gbeta
EIF3I
Beta-prop_WDR36-Utp21_2nd
Beta-prop_TEP1_2nd
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_SCAP
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
Beta-prop_DCAF4
WD40_MABP1-WDR62_1st
Beta-prop_Aladin
Beta-prop_EIPR1
Beta-prop_IFT122_1st
NBCH_WD40
Beta-prop_WDR41
Beta-prop_RIG_2nd
WDR90_beta-prop_4th
ANAPC4_WD40
Beta-prop_DCAF12
Beta-prop_IFT140_1st
Beta-prop_Nup120_160
Beta-prop_SPT8
Beta-prop_NWD2_C
Beta-prop_VPS8
Beta-prop_HPS5
Beta-prop_Vps41
WD40_like
Beta-prop_WDR35_TULP_N
Nbas_N
Beta-prop_WDR75_2nd
Beta-prop_ACSF4
UTP15_C
PROPPIN
KNTC1_N
SGL
MIOS_WD40
RPN2_N
Motif
Other DBs
NCBI-GeneID:
143534862
NCBI-ProteinID:
XP_076885354
LinkDB
All DBs
Position
Unknown
AA seq
871 aa
AA seq
DB search
MASVTLKKNYRCAQSLQQFYSGGPYAVSSDESFIACACNDTIKIVDLLNASIKFTIENAG
DSEDVTAIALSPDDKFLFSAGHNRMIKVWDLSNLSRPRSWKDRQGLVVSMACHASGGLLA
AGGSDGKVLVWDIDGEFCTHFFKGHNSTPVTSVIFHPDPTRLLLFSGSTDTTVRVWDLTS
KKCVATLERHQSDVTSVAVTEDGWTLLSGGRDQVVNLWNLRDYSLIRSIPTSEAIEALCV
IGAKTSFASCLQSKKAGDELAFQFLTVGEHGIVRIWNSHGAVCVFQQASSDVTVIKTDEK
GAKRGFTSTTMLPSGRGLLCVTADSDFLLYSPNQSQEGSFQLNLDKRFVGYNEEIVDMKF
VGEEEQFLAVATSVEQVRVYDLGSMSCSYVLAGHTEIVLCLDTCTTSSGRTLIVTGSKDN
TVRLWDSNSRSCIGVGKGHMGAIGAVAFAKKLQNFFVSGSSDQTLKLWSLDDLSDDMNDG
FSLKTKAATAAHDKDINALAVAPNDSLICSGSQDRTARIWKLPDLKPGVVLKGHKRGIWS
VEFSPVDQCVITASGDKTTKIWAISDGSCLKTFEGHTASVFKVQFISRGAQFVSCGADGL
LKLWTVKTNECIATYDQHEDKVWALTVGKKTETLATGGSDAVINLWHDSTAADKEDAFKK
EEESALKGQELENAVEDGDYTKAIRLAVELRRPHKVFKLFGELCRKEDAKNKVKTALDVL
SSDEYRLLLEYVREWNTKPKFCHIAQFVLHQVFSILPPTKIVEMKGVGELLEGLIPYSQR
HYSRIDRLERSTFLLDYTLNGMSVVEPELELELELELEPEAGVVDDPKDASLMEVEGQDQ
EPAEEDDGLKKRSLKNRKSHKSNGGSKKIKA
NT seq
2616 nt
NT seq
+upstream
nt +downstream
nt
atggcttcagtcacactgaaaaagaactaccggtgtgcccagtctctgcaacagttttac
tccggcgggccttacgcggtgtcgtccgatgaatcgtttatcgcttgtgcgtgcaatgac
accatcaagattgtcgatttgttgaatgcttcaattaagttcaccattgaaaatgctggt
gattcggaggatgttactgctattgctcttagccccgatgataagtttttgttttccgcc
gggcataatcgtatgatcaaggtttgggatttgtccaatcttagtcgcccgcgttcttgg
aaggatcggcagggtctggtagtgtcgatggcatgtcacgcatctggtggtttgctggca
gctggtggatctgatggtaaagtgcttgtgtgggacattgacggtgaattttgtactcat
ttttttaagggtcataatagcacgcccgtgactagtgttattttccatcctgacccgact
cgtttgctgcttttttctggaagtaccgatactactgtacgcgtatgggatttaacaagc
aagaaatgtgttgcgactttagaaagacatcagtcagatgtgactagcgttgcagtaaca
gaagatggatggactctgttgagcggtggcagagatcaggttgtaaacttgtggaacctt
cgtgactacagcctaattaggagtatacctaccagtgaagcaattgaagctttatgtgtt
atcggtgcgaaaacttcttttgcttcatgtctgcaaagcaagaaagctggtgacgagtta
gcgtttcagtttctgactgtcggtgaacacgggattgtacggatatggaattcgcacggt
gcagtatgcgtgtttcagcaagcatcttcagatgttacggttatcaaaacggatgaaaag
ggagccaaaagagggttcacatcgactacgatgttgccttctggccgagggttgctatgt
gtcactgctgacagtgattttctgttatattctccaaaccaatctcaagaaggaagcttt
cagttgaatctcgacaaaagatttgtaggatacaacgaggagatagtggatatgaagttt
gtcggtgaggaagaacagtttcttgctgttgctacaagtgttgaacaggtacgagtgtat
gatcttggttccatgtcgtgctcttatgtgttggcgggccacaccgagattgtgctatgt
ttagatacgtgtacaacaagctctggaagaacgttgattgtaaccgggagcaaagataac
accgtaagattatgggactccaacagtcggtcttgcattggagttggaaaaggtcacatg
ggtgcgattggagcagttgcttttgcaaagaaattacagaatttttttgttagtggtagt
agtgatcaaactctgaagttatggagtttagatgacctatcggatgatatgaacgatgga
tttagtttgaaaactaaagcagcgactgcagcccatgataaggacattaatgcacttgcg
gttgcaccaaacgacagtcttatttgtagtgggtcccaggatcgtaccgctcgtatctgg
aagcttccagatttaaaacctggtgttgtacttaaaggccacaaaagaggaatctggtct
gtagagttttcaccggttgatcagtgtgttataaccgcctctggagacaaaactacaaag
atttgggctatatcagacggttcttgtttaaaaacatttgaaggtcacacagctagtgtt
ttcaaagttcagtttatttctcgtggtgctcagtttgtttcctgtggtgctgatggtttg
ctaaagctctggactgttaagacaaacgagtgtattgcaacttatgatcaacacgaggac
aaggtgtgggcgttgactgtggggaagaaaacagaaacgttggcgacaggtggcagcgat
gctgtaataaatctatggcatgattctactgctgctgataaagaggatgcattcaagaaa
gaggaggaaagtgcattaaaaggccaagagctagaaaatgctgtagaagatggcgattac
acaaaagctatacgtcttgcagttgagcttcgtagaccccacaaagtattcaagttattc
ggtgaactttgcaggaaggaagatgccaaaaataaagtgaaaacagctctcgatgttctt
agcagtgacgaatatcgtttattattagagtatgtccgagaatggaatacaaaaccaaag
ttttgtcacattgcacaatttgtgcttcatcaggttttcagtattcttccaccaactaag
atagtcgagatgaaaggcgttggggagcttctagaaggactcataccgtattctcagagg
cattacagcaggatagacagattggaaaggagtacgttcttgttggattacacgcttaac
gggatgtcggttgttgaaccagaactggaactggaactggaactggaactggaaccggaa
gcaggtgttgtagatgacccgaaggacgcgtctttaatggaggttgaggggcaagatcaa
gaaccagctgaagaagatgacggtttaaagaaacggtctttgaagaataggaaatctcat
aaatcaaatggtggaagtaagaaaattaaagcatag
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integrated database retrieval system
