Bidens hawaiensis: 143535074
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Entry
143535074 CDS
T11418
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 13-like
KO
K15164
mediator of RNA polymerase II transcription subunit 13
Organism
bhw
Bidens hawaiensis
Brite
KEGG Orthology (KO) [BR:
bhw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bhw03021
]
143535074
Transcription machinery [BR:
bhw03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
CDK-module
143535074
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MID_MedPIWI
Med13_N
Med13_C
Motif
Other DBs
NCBI-GeneID:
143535074
NCBI-ProteinID:
XP_076885522
LinkDB
All DBs
Position
Unknown
AA seq
1859 aa
AA seq
DB search
MWTNVFKIGGLHQVSWFQFLPNESDSNLSDRSLNSNQKDAAAQLVISSHLQLQKDGFLST
WGNSFVGPWDPSQGLHNPDEKIKLWLFIPGRHSSVVDKAKAAVSKLRGFASGVWLAPGDS
EEVATALSQALRNCIERALMGLSYMRFGDVFSRYHPSSQGEELFRRGQPVLEFTFTATEE
GIFAHVIISAKHVRALSSGDMETILKRTSSNSSVRLPVIVSPHGMRGRITGICPGDLVKQ
LYFSSGKFKAINGIVGLPNQFSQSSGCQLRGQNCYLEVTLGCENAESEKSLPPNSNTSSK
NHISESPGVTKEYEKTFIYPAEAVLVPLVQTSSARSSLKRFWLQNWMGPSLSSSSFSMQC
DAFGIMDGSWHDNDMRAQNGYNSSGNSNSSSISTSSSSDSDYRMTGETGDLEADADSLSC
MKFGLTTADQMHIDGSKLSSKRSRAGMGESYGPAGAIINAQQDGYNSINNDQGGSGWDWD
DDDKGVVMDIQALLSEFGDFGDFFENDVLPFGEPPGTEELQTPMFSATDGGDASSSPFTG
MIDTSDPMILPVGFSSFESFNPPSTVIEESISKNQEITITKDALSSGSMNYNPAAPTSSE
FDYLIKAEALMTFAPEYGAVEAPTTDALSSLIKSPYIPKSRTADSANSSTNNYIYSATPP
QHDVSDDKTIVGVNSKDKYLLQSKKYYTHVESGKNDKKDDKMSSRDNTVEDVAPSAFSGF
NSSNTGFRASTRNKITESFLISSKTAIANELECIMFQAFMCKIRHTLLTPTSSLQMSRLS
GSNALYQMHGESSVLPDNISNKYDIKKKETIPVRIAGDLDGGLLDGPLNPPVGVWRTVGV
TKGSKPMTSSMEPFGSLPHNSFNEEGMLSYGQRQPLLDLLDGMPLLVQQATSFVDVTLDA
DCGDGPYGWLAMQEQLRCGFSCGPALVHAGCGGVLSSCHSLDIAGVELSDPLSADVHASY
AITLLQTDIKSALKSAFGTFDGPLTVTDWCKGRNGQTDVFSAESSASINDSSVEPISPSQ
SADGTRMDDTSESEQQLGLRPALLVIPIPAILVGYQDDWLKTSATALQHWEKAPFEPYAL
KKHMNYCVVCPDIDPLTTAAADFFQQLETVYETCKLGTHSPQNFGNQTAKDLGKWSSSGF
VLLDCPQSMKIESDSASLVGSISDYFLSLSNGWDLTSFLKSLSKVLKALKLNSCFAPTSK
EGNNTPCTVIYVVCPFPEPVAVLKTVVESCVAIGSVVFPSSDKERRNAMQNQVGKALSCS
TAVDDASISNVVTISGFSIPKLVLQVVAVDAIFRVTSPSLNEPVILKEIAFTVYNKARKI
SRGSSADVMPSVSVSGRPQSHSSMMQMSSSMQGMWKDSLGPRMGPREGELDAGLRAGVWD
NSWQMTRSDRPGEYYIQDELKYMFEPLFILAEPGSSERGLSPDSLKLLSDDGTSSDTGMG
SQMDGSDDGFGSGHKQPLSLHCCYGWTEDWRWLVCIWTDSRGELLDSCTFPFGGISSRQD
TKGLQFLFVQILQQGCQILQACSSDSTPARPHDFVITRIGCFFELECQEWQKALYSIGGS
EVKKWSLQLRRSVPDGMTASSNGGPQDMSIIQDRNLQSHTKGSNYMKGGLGQSLGRKQLG
GGHIAMDNSKGLLQWVQSITFVSVSVDHSLQLVYQADSSPGTTQGSGVMGQSCYVEGFTP
VKSLGSASTSYIFVPSPSMRFLPPNPLQLPTCLTSESQPLAHLLHSKGSAIPISTGFVVS
KAVPSMRKDSRTNCKEEWPSVLSVGLFDYYGSNNNSNSNNNNNNNNEKGKNVGKSGMENH
MILERVAAELHALSWMTVSPGYLERRSALPFHCDMVLRLRRLLHFADKELSQPSVKSEV
NT seq
5580 nt
NT seq
+upstream
nt +downstream
nt
atgtggacaaatgtattcaaaatcggcggtctacatcaagtgtcatggttccagtttctc
ccaaatgaatctgactccaacctatccgatagaagtttaaattcgaatcagaaggatgct
gccgcacagttggttatttcatcccatttacagttacaaaaagatgggtttcttagcacg
tggggcaattcctttgttgggccttgggatccatctcagggcctacataaccctgacgag
aaaatcaagttatggctttttatcccgggccgacattcatctgttgttgataaggccaaa
gccgctgtatctaaactaagaggttttgcatctggagtctggttagcacctggggactct
gaagaggtggcaactgcactttctcaagctttaaggaattgtatcgaaagagctttaatg
gggctttcatatatgagattcggggatgtattctcaagataccacccatcttcacaagga
gaagagctattcaggagaggccagccggtgcttgagttcacctttactgcaacagaagag
ggcatatttgctcatgtcataatatctgcaaagcatgttagggcactttcaagtggggac
atggagacgatcttaaaacgcacatctagcaattccagtgtcaggcttccagttattgtt
tcacctcatggaatgcgtggcagaataactggaatttgtccaggtgaccttgtaaagcag
ctatatttcagttctgggaagtttaaggctataaatgggattgtaggacttccaaaccag
ttttcacaaagttctggctgccaattaaggggccaaaactgttaccttgaggtaactctg
ggttgtgaaaatgctgaaagtgaaaaatcacttccaccaaattcaaatacgagttcaaag
aatcatatatctgaatctcctggcgtcacaaaagaatatgaaaaaacatttatttatccg
gctgaggcagtccttgtgccacttgtgcaaacatcatctgctagatcatctctaaaaaga
ttctggcttcaaaattggatgggcccatcattatccagctcatcattctctatgcaatgt
gatgctttcggtatcatggatggatcatggcatgataatgacatgcgggctcaaaatggt
tacaacagtagtgggaatagtaatagtagtagcattagcactagttcgtctagtgacagt
gattatagaatgactggtgaaaccggtgatcttgaggccgatgctgactcactatcttgc
atgaagttcggtttgactactgctgaccaaatgcatattgatggctccaaactgagtagt
aagcgatccagagctgggatgggtgagtcatatggtccggctggtgcaatcattaatgca
caacaagatggatataattcaatcaacaatgatcagggcgggtctgggtgggactgggat
gatgatgacaaaggcgttgtgatggatatccaagcacttctctctgagtttggagatttt
ggtgatttttttgaaaatgatgttttgccatttggagagccgccagggactgaggaatta
cagacgcccatgttttctgcaactgatggtggagatgcaagtagcagcccgtttactggg
atgattgatacttctgatccaatgattttaccagtcgggttttcatcatttgagagtttt
aacccaccatcaactgtcatagaggaatcaataagcaaaaatcaagaaattacaattaca
aaagatgctttatcttctggatcaatgaactacaatccagccgcacctacttccagtgaa
tttgattatttgataaaagcggaagcgttaatgacgtttgctccagaatatggagcagtt
gaagccccaacaactgatgcattatcatcccttattaaaagcccgtacatcccaaaatcc
cgaacagcagatagtgcaaattcaagtacgaataactacatttactctgcaacacctccc
caacacgatgtatctgatgataaaacgatcgttggtgtaaattcaaaagacaaatactta
cttcaatcgaagaaatactacactcatgttgaaagtggaaagaatgataaaaaagacgat
aaaatgtcatcgcgtgacaatactgttgaagatgttgcaccgtcagctttttcgggtttt
aattcttcaaacacgggttttagagcatctacccggaataagataactgaaagttttctt
atatcgtcaaaaaccgctattgcaaatgagctcgagtgtattatgtttcaagcttttatg
tgcaaaatacggcatacattgttgactccgaccagctcgttgcaaatgagtcggttatct
ggaagtaatgctttgtatcaaatgcatggtgaatcaagtgttttaccagataacatatct
aacaaatatgatataaagaaaaaagaaacaatacctgttagaatcgcgggtgatttagat
ggcgggctgcttgacgggcctctgaatccacctgttggtgtttggcgaacagttggtgtc
actaaaggttcaaaacccatgacatcgagtatggaaccgtttggctctttacctcataat
tcgtttaatgaggaaggaatgttgtcatatggccaaaggcaaccacttttggacctttta
gatggaatgccattgcttgttcaacaagcaacgtcttttgttgatgtgacattagatgcg
gattgtggggacggaccttatggttggctggcaatgcaggaacagttgaggtgcgggttt
tcgtgtgggcctgctttggttcatgcaggttgtggtggggttttgtcttcctgtcattct
cttgacattgcgggtgttgagctgtcggacccactttcagctgatgtgcatgcatcatat
gccatcactttgctacagactgacattaaatcagccttgaaatcggcctttggaactttt
gatggacccttgactgtaactgattggtgcaaagggcgaaatggtcaaactgatgttttt
tcagctgaatcatctgcaagcataaatgattcttcggttgaaccaataagcccatctcag
tctgctgatggaactcgaatggatgacacaagcgagtcagagcagcaactaggactcagg
cctgcgcttcttgtaattcccattcctgctattcttgtcgggtaccaggatgattggcta
aagacctcagcaactgctctacaacactgggaaaaagctccttttgaaccttatgcttta
aagaaacatatgaattactgtgtcgtttgtcctgatatcgacccccttacaacagcggct
gcagactttttccaacaactagaaacagtgtatgagacttgcaaattaggaactcattca
cctcaaaattttgggaaccaaactgctaaagatttggggaaatggtcttcttctggtttt
gttttacttgattgccctcaatcaatgaagattgaaagcgatagtgcatctttggtcgga
tcaattagtgattattttctttcattatctaacggatgggatttaacaagtttcttgaag
tcactctctaaggtcttgaaagccctaaaactcaattcctgttttgctcctacttcaaaa
gaagggaacaacactccttgtacagtaatatatgtggtgtgcccgtttcccgagcccgtg
gccgttttgaaaactgttgttgaatcgtgtgtagctatcggttcagtcgtatttccatca
tccgacaaagaaagaagaaacgcaatgcagaatcaagttgggaaggcgttaagttgttct
acagctgtagatgatgcatcgatatcaaatgttgtgacaatttctggttttagcatccct
aaactggtattacaggtcgtggccgttgatgcaatatttcgtgtcacaagcccgtctctt
aacgagcctgttattctcaaagagattgcattcacggtctacaataaagcccgaaaaatt
tcccgagggtcgtctgctgatgtcatgccctctgtttcagtatcgggtcggcctcaatct
cattcaagtatgatgcagatgagttcttcgatgcaagggatgtggaaagattctctcggc
ccgcgaatgggcccacgagagggtgaactggatgctgggttacgtgccggtgtgtgggat
aactcgtggcagatgacccggtctgacaggcccggggaatattatattcaagatgagttg
aaatacatgttcgagccgctttttattctggcggagcctggttcgtctgaacgcgggctg
tcaccggattcgttaaagcttttatccgatgacggtacgagttcagatactgggatgggg
tctcaaatggacgggtctgatgacgggtttgggtcaggtcataaacaacccctgagccta
cattgttgctatggttggactgaggattggcggtggctcgtttgcatatggaccgattct
cgaggcgaattgcttgacagctgtacgttcccgtttggtggaattagtagtcgacaagac
acaaaaggattacagtttctttttgttcagattttacaacaagggtgtcagattttacag
gcgtgttcttcagattcaactcccgctagacctcatgattttgttatcacgcgaatcggt
tgttttttcgagcttgaatgccaagaatggcaaaaggctctttattctattggtggatcc
gaggtgaaaaagtggtcattgcagcttagacggtcggtacccgatggaatgactgccagc
agcaatggtggcccgcaagatatgagtattattcaagataggaatttacagtctcacacc
aaagggtcaaactatatgaaaggtggacttggtcaatctttgggtagaaagcagctcggt
ggcggtcatattgcaatggataattcgaaggggttacttcaatgggtgcaaagcattact
tttgtatcggtttcagttgaccattcactacagttagtttatcaagcggattcatctcca
ggcacaactcaaggcagtggagtaatgggccaatcttgctatgtcgaaggattcacaccc
gtaaaatctctggggtccgcatccacatcgtacatattcgtaccctcccctagcatgcgt
ttcctcccaccaaacccgctccagctcccgacctgcctgacctccgaatcccaaccgcta
gcccacctcctccacagcaaaggttccgccattcccatatccacgggcttcgttgtctca
aaagccgtcccttcaatgagaaaagactccagaaccaattgcaaagaagaatggccttcg
gtcctatccgtcggacttttcgattattacggtagcaacaataatagcaacagtaataat
aataataataacaataacgaaaaagggaaaaacgtgggaaaatcgggaatggaaaaccat
atgattctggaacgcgtggcggctgaactgcacgcgttatcgtggatgaccgtgagcccg
gggtatttggaaagacgaagcgcgcttccgtttcattgtgatatggttctcagacttaga
aggcttttacattttgctgataaggagttatcacagccttctgttaaatctgaagtttag
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integrated database retrieval system
