Bidens hawaiensis: 143537832
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Entry
143537832 CDS
T11418
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2-like
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
bhw Bidens hawaiensis
Pathway
bhw03020
RNA polymerase
bhw03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bhw00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
143537832
09124 Replication and repair
03420 Nucleotide excision repair
143537832
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bhw03021
]
143537832
03400 DNA repair and recombination proteins [BR:
bhw03400
]
143537832
Enzymes [BR:
bhw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
143537832
Transcription machinery [BR:
bhw03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
143537832
DNA repair and recombination proteins [BR:
bhw03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
143537832
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
143537832
NCBI-ProteinID:
XP_076887625
LinkDB
All DBs
Position
Unknown
AA seq
1024 aa
AA seq
DB search
MQEIVDESADIEIRPESQHNSGHQPDFAETIYKISFGQIYLSKPMMTESDGETATLFPKA
ARLRNLTYSAPLYVDVTKRAIKKGHDGEEVTETQDFAKVFIGKVPIMLRSSYCTLFQNSE
KDLTELGECPYDQGGYFIINGSEKVLIAQEKMSSNHVYVFKKRQPNKYAYVAEVRSMAES
QNRPPSAMFVRMLARTSAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHIC
YDFADTQMMELLRPSLEEAFVIQNQQVALDYIGKRGSTVGVTKEKRIKYARDILQKEMLP
HVGVEEYCETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFW
KLTRDVRGYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVL
NRLTYASTLSHLRRLNSPIGCEGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMV
YITVGSAAYPILEFLEEWGTENFEEISPAVIPQATKIFVNGLWVGIHRDPDMLVRTLRRL
RRRVDVNTEVGVVQDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQKLQQRETPED
GGWHDLVSKGFIEYIDTEEEETTMISMTINDLVSVRLNPDESYSVTYTHCEIHPSRILGV
CASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNFQFRMDTLAYVLYYPQKPLVTTRAMEH
LHFRQLPAGINAIVAISCYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVK
EDFGRPDRANTMGMRHGSYDKLDDDGLAPPGTRVGGEDVIIGKTTPIAQDDAAQGQASRY
TRRDHSTSLRHSENGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGM
TYTQEDMPWTIEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTV
DNISKALHKCGYQMRGFETMYNGHTGRRLPAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQ
ILTR
NT seq
3075 nt
NT seq
+upstream
nt +downstream
nt
atgcaggaaatcgttgacgagtctgctgatatcgagatccgacccgaatcccagcataat
tccggtcaccaacccgattttgcagagactatttataaaatcagctttggtcagatttat
ctgagtaaaccgatgatgactgaatcagacggagaaaccgccacactgtttccaaaagca
gcaaggctaagaaatctaacatattctgcaccgttgtatgttgatgtaacaaaaagggct
atcaagaaaggccatgatggtgaagaagtcacagaaactcaggattttgctaaagttttt
attggaaaggttccgattatgctacggtcaagttactgtacactatttcaaaactccgaa
aaggacttgaccgagcttggagagtgtccatacgatcaaggtggatattttatcatcaat
gggagtgaaaaggttttaattgctcaagagaaaatgagcagcaatcatgtatatgtgttt
aaaaagagacagccgaacaagtatgcttatgtggcagaagttcgttcaatggcagaatct
caaaataggccacctagtgccatgtttgtccgcatgcttgctaggaccagtgccaaaggg
ggctcttcaggtcaatatatccgtgctacacttccatatattcgaactgagattcctatt
attattgtgtttcgagcactgggatttgttgctgataaagatatattagagcacatatgt
tatgattttgctgacactcaaatgatggagttgctgcgtccttcattggaagaagcattt
gttatacaaaatcagcaagtggccttagattatattggaaaaagaggatcaactgttggt
gtcaccaaagaaaagagaataaagtacgctcgtgatattcttcaaaaagaaatgcttcct
catgtgggagttgaagaatattgtgaaacaaagaaggcatactattttggatacattatc
caccgtcttttgttatgtgctcttggacggagggctgaagatgatcgggatcattacggc
aacaagaggcttgatcttgcgggtccattgcttggtggcctatttagaatgcttttttgg
aagttaacgagagatgtaagaggatatgtacaaaagtgtgtggataatgggaaggatgtt
aatctgcaatttgcaattaaagcaaaaactattacaagcggtcttaaatattctcttgcc
actgggaactgggggcaagcgaatgcagctggtacaagggctggtgtttcacaggtgttg
aatcgtttgacatatgcttctactttgtcacatttgagaagattaaattcgcctatagga
tgtgaaggaaaattggcaaaaccgagacaactgcacaactcacaatggggaatgatgtgt
ccagccgaaacccctgaaggacaggcatgtgggctggtgaaaaaccttgcattaatggtt
tacataactgttggatcagctgcatacccaattcttgagtttttagaagaatggggcaca
gagaatttcgaggaaatatctcctgctgtcatcccacaagctacaaaaatctttgtcaac
ggtttgtgggtcggaattcatcgtgatcccgacatgttggttagaaccttgaggagatta
agaagacgagttgatgtgaacacggaagttggcgttgttcaagatattcgtttgaaagaa
cttcgaatttatacggattatggtcgttgcagtcgtccacttttcattgttgagaagcaa
aggcttttaataaaaaagaaagacatccaaaagctgcaacaaagggaaacaccagaagat
ggcgggtggcatgatcttgtgtcaaagggattcattgaatatattgatacagaagaagag
gagactactatgatttccatgaccataaatgatcttgtaagcgtgaggctaaatcctgat
gaatcatattcggttacttacactcattgtgaaatccatccttcacgaattttgggtgtt
tgtgcatctatcataccctttcctgaccacaatcagtctccacgtaacacataccaatca
gccatgggaaaacaagctatgggtatttatgtcaccaacttccaatttcgtatggataca
ttggcgtatgttctttactatcctcaaaaaccacttgtgactactcgagcaatggagcac
ttgcactttagacaacttccagctggcattaatgcaattgtggcgatttcctgttattct
ggatacaaccaagaagattcggttattatgaaccaatcatcaatagaccgtggcttcttc
agatcacttttcttccgctcatacagagatgaagaaaagaaaatggggacacttgtgaaa
gaagattttggccgacccgatagagctaataccatgggtatgaggcatggttcgtacgat
aaattggatgatgacggtttagcccctcctggaacacgagttggaggtgaagatgtaata
atcgggaaaacaacaccaatagctcaagatgatgctgctcaaggtcaagcctcgcgttac
actcgtcgcgatcacagcacaagcttacgtcacagtgaaaatggaatggttgaccaggta
ctgctgactacaaatgcagacgggctacgtttcgtgaaagtgcgagtaagatccgtaaga
ataccccaaattggagataagtttagtagtagacacggccaaaagggaaccgtgggtatg
acttacacgcaagaagacatgccgtggaccattgaaggcatcactcccgatattatcgtc
aacccgcacgctatcccgtcccgtatgactatcggtcaacttatcgagtgtatcatgggg
aaagttgctgcacatatgggcaaagaaggagacgccacgcccttcacagacgttactgtg
gataatatcagtaaggcgttacacaagtgtgggtaccagatgcgtgggttcgagacaatg
tacaatggtcatacgggtcggaggcttccggctatgatattcctcgggcccacatactac
cagaggttaaagcatatggtggatgacaagatccattcacgtggacggggcccggttcag
attcttaccaggtag
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