Bidens hawaiensis: 143538457
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Entry
143538457 CDS
T11418
Name
(RefSeq) polygalacturonase-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
bhw Bidens hawaiensis
Pathway
bhw00040
Pentose and glucuronate interconversions
bhw01100
Metabolic pathways
Module
bhw_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
bhw00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
143538457
Enzymes [BR:
bhw01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
143538457
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Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Cys_knot
Motif
Other DBs
NCBI-GeneID:
143538457
NCBI-ProteinID:
XP_076888137
LinkDB
All DBs
Position
Unknown
AA seq
458 aa
AA seq
DB search
SNMAPQRCITFLSFVMALVFFSISCSSFSYHEDAGNYKSGFSRASIWYMKGVKDLLFQES
VGFDSLDLVATKTFDVDSFGAKGDGKKDDTKAFKKAWEEACSSTTAAVFRVAKNKKYLVS
PIRFKGPCKASITMQISGTILASKQESKYKKDERHWLRVDKVDNLVIEGGGVIDGNGDYW
WKKSCKVDEKLPCTDAPTALTLYKCTSLTVNNLKIQNAQKMHISFDNCVDVQASNIEVTA
PEDSPNTDGIHVTHTQNITISDSVIGTGDDCISVVSGSVGVQATGITCGPGHGISIGSLG
QKKAEAYVSDVTIDGATLTNTTNGVRIKTWQGGSGNASNIIFQNIIMKNVSNTIIIDQNY
CDQDKACKEQDDAVEIIDVTYNNITGTSADDEAIIFDCSKKHPCQGIVLKQINLTQVDGD
DAKAVCNNVDVNYSKTVIPRCPKNDDLYQLLFGTIAVD
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
tcgaatatggctccacaaagatgcataacattcctctcttttgtcatggccctcgtattt
ttctctatctcatgttcctcttttagctaccatgaagatgctggtaactacaaatctggc
ttttcaagagcgagtatttggtatatgaaaggcgttaaagatttactgtttcaagagtcg
gtcggttttgatagtttagatctcgttgctaccaaaacattcgatgtcgattcttttggt
gctaaaggtgatggcaaaaaagacgatacaaaggcattcaagaaagcatgggaggaagca
tgttcctctaccacggcagccgtttttcgtgtggctaagaacaagaagtaccttgtttcc
ccgatcaggttcaaaggtccttgcaaagcttcaataaccatgcagatttcaggaacaatt
ttggcatctaagcaagaatcgaaatataagaaagatgaaagacattggcttagggtggat
aaagttgataacttggtgatcgaaggaggtggagtcattgacggcaacggggactactgg
tggaagaaatcctgcaaagtcgatgagaagcttccatgcacagatgccccaacggcttta
acgctctacaagtgcacatctttgacggtgaataacctaaaaattcaaaatgcacagaag
atgcacatttctttcgacaactgtgtagacgtccaagcgtcgaatattgaagtgactgca
cccgaagacagccctaacaccgatggaattcatgtcacacacacccaaaatatcacaata
tccgactccgttataggaacaggggatgactgcatttcggttgtgagtggatcagtaggt
gttcaagctaccggtataacatgtggacctggtcatgggattagtattggaagtcttggg
cagaaaaaggcagaagcttatgtttcagatgtgacaattgatggcgctacacttactaat
acaacaaatggtgttagaatcaagacttggcagggaggttctggaaacgcaagcaatatt
atttttcaaaatatcatcatgaagaatgtttcaaacactatcatcatagatcaaaattat
tgtgatcaagataaagcgtgcaaagaacaggatgacgctgttgaaataatagatgtgact
tacaataatattaccggaactagtgctgatgacgaagcaataatattcgattgcagcaaa
aaacatccatgtcaagggattgtgttgaaacaaataaatcttactcaagttgacggtgat
gatgctaaggctgtttgcaacaatgtcgacgtgaattacagcaaaacggtcatcccaagg
tgcccgaaaaatgatgatctatatcaactactatttgggactatagctgttgattaa
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