Bidens hawaiensis: 143538740
Help
Entry
143538740 CDS
T11418
Name
(RefSeq) carbon catabolite repressor protein 4 homolog 4-like
KO
K12603
CCR4-NOT transcription complex subunit 6 [EC:
3.1.13.4
]
Organism
bhw Bidens hawaiensis
Pathway
bhw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bhw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
143538740
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bhw03019
]
143538740
Enzymes [BR:
bhw01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
143538740
Messenger RNA biogenesis [BR:
bhw03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
143538740
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
143538740
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
143538740
NCBI-ProteinID:
XP_076888337
LinkDB
All DBs
Position
Unknown
AA seq
380 aa
AA seq
DB search
MFSVCFIKLGLLISMLIMCSKICVTSMSTGKAAAAAAIPVYPKFVPVEQKEITSVTKSDG
FTFRLVSYNILAQAYVKSSVFPHSPSPCLKWKARSPAVLDVLRSLDADILCLQELDEYDS
FYKEKIEQNDYSSIYIKRSGKKLDGCGIFYKHNKLELVIEETIDYNDLAESILDDASREE
PKEKASDTNNRGDPNDPYVRLKRDCVGIMAAFKFKYPYQHYVIVTNTHIYWDPEWADVKL
AQAKYLLSRVAQFQKMVSDKFECTPSVLIAGDFNSVPGDKVYQYLVSGGPMSEPSSECSD
DVPMPLCSVYAYTRGEPQFTNYTPGFTGTLDYILFSPSEGIEPVSYLELPDAESPDLKGG
LPNYCYPSDHLPIGAEFAVV
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgtttagtgtttgttttattaaattagggcttttaatctcaatgttgattatgtgcagt
aagatttgtgtgacaagtatgagtactggtaaagctgctgcagctgcagctataccggtt
taccctaagttcgttccggttgagcagaaggagattacttcagttaccaagtctgatggc
ttcacgtttcgactggtttcctataatattcttgctcaggcatatgtaaaaagttctgtg
tttccacactctccatcgccatgtctcaagtggaaagctcgttcaccagcagttcttgat
gttctcaggagtcttgatgctgatatcttatgtttacaggaattagatgaatatgatagc
ttctacaaagaaaaaatagagcagaatgattactcaagcatctacattaaaagaagtggc
aaaaaacttgacgggtgtggaattttctacaagcacaataaattggaattggtcatagag
gagacaattgactataatgacctggctgaatcgattctagatgacgcatcacgtgaggaa
ccaaaagagaaggcttccgacaccaataatagaggagatcctaatgatccatatgtacgg
ttgaaacgtgattgtgttggaattatggccgcattcaagttcaaatatccttatcaacat
tatgtcattgtgacaaacacacatatttactgggacccagaatgggctgatgtcaagctt
gcacaggcgaaatatttactgtcacgtgtagctcaattccaaaaaatggtatctgataaa
tttgagtgcacgccgtcagtgcttattgctggagattttaattcagttcctggagataag
gtataccagtaccttgtttctggtgggcccatgtcagaaccttcatcagaatgttcagat
gacgtaccaatgcctttgtgcagtgtgtatgcatacacaaggggtgaaccgcagttcaca
aactacacaccggggtttactgggacacttgattacatattattctctccttccgagggc
attgaaccagtcagttaccttgagcttccagatgctgaatcacctgacctaaaaggtgga
ttgccaaattactgctatccaagtgatcatttgccaataggtgccgagtttgcagtggtc
taa
DBGET
integrated database retrieval system
