Bidens hawaiensis: 143539807
Help
Entry
143539807 CDS
T11418
Name
(RefSeq) chaperonin CPN60-2, mitochondrial-like
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
bhw Bidens hawaiensis
Pathway
bhw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bhw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
143539807
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bhw03019
]
143539807
03110 Chaperones and folding catalysts [BR:
bhw03110
]
143539807
03029 Mitochondrial biogenesis [BR:
bhw03029
]
143539807
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bhw04147
]
143539807
Enzymes [BR:
bhw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
143539807
Messenger RNA biogenesis [BR:
bhw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
143539807
Chaperones and folding catalysts [BR:
bhw03110
]
Heat shock proteins
HSP60 / Chaperonin
143539807
Mitochondrial biogenesis [BR:
bhw03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
143539807
Exosome [BR:
bhw04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
143539807
Exosomal proteins of other body fluids (saliva and urine)
143539807
Exosomal proteins of breast cancer cells
143539807
Exosomal proteins of colorectal cancer cells
143539807
Exosomal proteins of bladder cancer cells
143539807
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cpn60_TCP1
ChlI
Motif
Other DBs
NCBI-GeneID:
143539807
NCBI-ProteinID:
XP_076889130
LinkDB
All DBs
Position
Unknown
AA seq
545 aa
AA seq
DB search
MDLETGSLVGVMLNDGEGVVIGSRLNSSRNGAAKDIKFGADARALMLEGVEELADAVRVT
MGPKGRNVVIEQSCGAPKATKDGLTVAESIEFDDKVKNAGASLVKQVANATNDVAGDGST
CATVLTSAIFSEGCRSVAAGVNAMDLTRGISMAVDAVLTNLSSGAHVISTSEEITQVMTV
FANGDSEIGGLIATAMKQVGNEGAITIQEGKTLYNELDIVNGMNLDRGYISPHFITNQKN
KKCELDNPLVLICGKKISYVSSVKKVSELALQNQRPMLIIARDVENVALAALIANRLNDG
IQVCAIKAPGFGENMEANLEDLAILTGGQLITDGINLDDLTLDMLGSCKMVTVSKDDTVV
IDGAGDMGSIQARIAQISSAIESSTSDYEKEILQERLAKLAGGVAVLKIGGVSDTEVSEK
KERVTDALNATKAAIEEGIIPGGGVALLYASRDLDKLETTNDDQKAGVLIIQNALKMPVQ
TIASNAGVQGSDVVDRLLEQDDPNLGYNAATGEYVDMMENGIIDPLKVIRTALVGAASVF
FDGHH
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atggatttggagacggggagtttggtgggtgtgatgctaaacgacggtgaaggtgtggtg
attggaagtaggttgaactcaagtagaaatggcgcggctaaagacatcaaatttggagcg
gatgctagggctttgatgcttgaaggtgttgaagagcttgctgatgccgttagggtaact
atgggtccaaaggggcgtaatgtggtgattgaacaaagttgtggagccccgaaagcaaca
aaagatggtttaactgttgcagaaagcattgagtttgatgataaagtcaagaatgctggt
gcaagtcttgtgaaacaagttgctaatgctacaaacgatgttgctggtgatggtagtact
tgtgcaacagtccttacaagtgcaatattctcagaagggtgcagatcggttgcagctggt
gtcaatgcaatggacctcacacgaggtatttccatggcggttgatgcagttttaacaaac
ttgagtagtggggcccacgtgataagcacatctgaggaaatcacacaggtgatgacagtt
tttgcaaacggagacagtgagataggtggactaatagccacagctatgaagcaagttggg
aatgagggtgccatcacaattcaagagggaaaaaccttgtataatgaactagacattgtc
aacggaatgaacttggacagaggctacatatctccacatttcattacaaaccaaaaaaat
aaaaaatgtgaactagacaaccctcttgttctaatttgcgggaagaagatttcatacgtt
agctcggttaaaaaagtgtcagagttggcactacagaatcaaagacccatgttaattatc
gctcgagatgtggagaatgttgcattggctgccttaatcgctaacaggcttaatgacgga
attcaggtgtgtgctataaaagcacctggttttggtgagaatatggaggcaaacttggaa
gatcttgccattcttactggtggtcagcttataactgacggtataaatcttgacgatctg
acgctagacatgcttggctcttgtaaaatggtcactgtatccaaagatgatactgttgtg
attgatggtgctggtgacatggggtctatacaagcacgaattgcacaaataagttcagca
attgagtctagcacgtctgattatgaaaaggagatattacaagaaaggttagccaagttg
gctggtggtgttgctgtactcaagattggaggagttagtgacactgaagttagtgaaaag
aaagaaagagttacggacgctttaaacgcaacaaaggcggccatcgaagaaggaatcatt
ccaggtggtggtgttgcacttctgtatgcatctagagatttggataagctggaaacaact
aatgatgatcagaaagcaggcgttctgattattcaaaatgcacttaagatgccagttcaa
acaattgcttctaatgctggagttcagggttcggatgtggttgataggcttttagagcaa
gatgaccctaatcttggttataatgcagctacaggtgaatatgtggatatgatggaaaat
ggaatcattgacccattgaaagtgattagaacagccttagttggtgcagcaagtgtcttc
tttgatggccaccactga
DBGET
integrated database retrieval system
