Bidens hawaiensis: 143540306
Help
Entry
143540306 CDS
T11418
Name
(RefSeq) ubiquitin domain-containing protein DSK2a-like isoform X1
KO
K04523
ubiquilin
Organism
bhw Bidens hawaiensis
Pathway
bhw04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
bhw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
143540306
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bhw04131
]
143540306
03051 Proteasome [BR:
bhw03051
]
143540306
Membrane trafficking [BR:
bhw04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Selective cargos
143540306
Proteasome [BR:
bhw03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
143540306
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UBQLN1
ubiquitin
Rad60-SLD
UBA
STI1-HOP_DP
Ubiquitin_2
UBA_7
Dsc3_N
Rad60-SLD_2
XPC-binding
Phasin_2
UBA_HOIP
Motif
Other DBs
NCBI-GeneID:
143540306
NCBI-ProteinID:
XP_076889522
LinkDB
All DBs
Position
Unknown
AA seq
555 aa
AA seq
DB search
MGGGSGDESNGADSVKVNVRCSNGNKFSVQATLDSSVESFKSVLEQNCDISAAQQRLIYK
GRILKDDQTLKSYGMEAEHTVHLVRGFVPATATPAGGAPAGATATPPAAEQTGSVGGGTT
GGPGVGGSLFPGLGLGGLGGNGGGMFGGGLPDLEQMQQQMTQNPNMMREIMDLPLFQNLL
NNPEIMRNMMMNNPQMRDLIDRNPELGHMLNDPAILRQTMEAARNPELMREMMRNTDRAM
SNIESSPEGFNMLRRMYENVQEPFLNATTMGGGGGDTTNDLNSNPFAALLGGGQGGQPRG
QVANPTTTGADTTTGSPAPNTNPLPNPWAGGGGAANQTNAAATNTGGAGRPPPPVGGLGG
LGLPGLEGLFGGTNPDPNSMSQLMQNPAISQMMQSLLSNPQYMNQILGLNPQMRSMLDAN
PQLREMMQNPDFIRQLTSPETMQQMMTLQQSLFSGLGQQLTRDAGQTGGGTAGAPNNPNP
NMNMEMLMNMFGNLGTGGFTAPTNSNVPPEELYATQLAQLQEMGFFDTRENLQALTATRG
NVHAAVERLLGNLGP
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atgggcggcggaagcggtgatgaatccaacggcgccgattccgttaaagttaacgtccgg
tgctctaacggcaacaagttctccgtccaggcgactctggactcgtctgttgagtcgttc
aagtctgttctcgaacagaattgcgacatatcggccgcacagcagcgcttgatttacaaa
ggacggattctcaaggatgatcagactcttaagagctatggtatggaggcagagcacact
gttcacttggtgcgcggttttgttcctgctacagctactccagcaggtggggcccctgcc
ggagcaactgctactccacctgctgcagagcaaactggctcggttggaggtggaaccaca
ggtgggccgggtgttggtggctcactgtttcctggactcggtctgggtggtttgggaggt
aatggtggtggcatgtttggaggtggacttccagatttggaacaaatgcaacagcagatg
actcaaaaccctaacatgatgcgtgaaatcatggatctgcctctttttcaaaatctgtta
aacaacccggagatcatgcgcaacatgatgatgaataatcctcaaatgcgtgacctcatc
gataggaatccagaacttggtcatatgcttaatgatcctgcaattcttcgtcaaacaatg
gaggctgcaagaaaccctgaactcatgcgtgaaatgatgcgtaacacagatagagcaatg
agcaatattgaatcgtctcctgaagggtttaatatgctcaggagaatgtatgaaaatgtt
caagagccgtttctgaatgctaccacaatgggcggtggcggtggtgatacaaccaatgat
ttgaactcaaatccgtttgcagctcttttgggaggtggtcagggggggcaaccacgtggc
caggtagctaaccctaccaccactggggctgacaccactactggttctcctgctccaaat
accaatccacttcctaatccttgggctggtggtggtggtgcagctaaccaaacaaatgct
gctgcaacgaacactggtggggctggtaggccgccacctccagttggcggtctaggtgga
cttggtcttccgggtctcgagggattgtttggtggcacgaaccctgatcctaattcaatg
agtcaacttatgcaaaaccctgctatttctcagatgatgcaaagtctactgtcaaaccca
cagtatatgaatcagatacttggtctcaatccacaaatgcgaagcatgcttgatgcaaac
cctcaattgagagagatgatgcaaaatccggacttcattcgtcagctaacttctccggag
accatgcagcaaatgatgacactgcaacaatctcttttctccggacttggtcaacaactc
accagggatgcaggtcaaactggtggagggacagcaggtgctcccaataacccaaatcct
aacatgaatatggagatgcttatgaacatgtttggtaaccttgggactggcggctttaca
gcaccaaccaattcaaatgtgccaccagaggaactgtatgctacccaactcgcgcagctt
caagaaatgggatttttcgatacgcgtgagaatcttcaggcactgactgccacccgaggt
aatgttcatgctgctgttgagaggctattgggaaatcttggtccctaa
DBGET
integrated database retrieval system
