Bidens hawaiensis: 143541999
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Entry
143541999 CDS
T11418
Name
(RefSeq) ubiquitin C-terminal hydrolase 12-like isoform X1
KO
K11838
ubiquitin carboxyl-terminal hydrolase 7 [EC:
3.4.19.12
]
Organism
bhw Bidens hawaiensis
Pathway
bhw03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
bhw00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
143541999
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
bhw01002
]
143541999
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bhw04121
]
143541999
Enzymes [BR:
bhw01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
143541999
Peptidases and inhibitors [BR:
bhw01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
143541999
Ubiquitin system [BR:
bhw04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
143541999
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
143541999
NCBI-ProteinID:
XP_076890781
LinkDB
All DBs
Position
Unknown
AA seq
1148 aa
AA seq
DB search
MTLMTPPPIDPEEEEMLVPHSELATTEGPEPMDVAPAEAANTVDAPVVDDPPSARFTWTI
ENFSRLSGKKLYSDAFFVGGYKWRVLIFPKGNNVDHLSMYLDVADSTALPYGWSRYAQFS
LAVVNQVHSKFTMRKDTQHQFNARESDWGFTSFMPLSELYEPSRGYLLNDTCIIEADVAV
RKVVDYWSHDSKKETGYVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTENDMPSGS
IPLALQSLFYKLQYSDTSVATKELTKSFGWDTYDSFMQHDVQELNRVLCEKLEDKMKGTV
VEGTIQQLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKGCRDVYASFDKYVEVERLEG
DNKYHAEQYGLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLQLDLDR
ENGKYLSPQADRSVRNLYTLHSVLVHSGGVHGGHYYAYIRPTLSDQWLKFDDERVTKEDM
KRALDEQYGGEEELPLANPGFNNSPFKFTKYSNAYMLVYIRESDKEKIICNVDEKDVAEH
LRIRLKKEQEEKEQKRKEKAEAHLYTIIKVARDENLHEQIGKNIFFDLVDHDKVRSFRIQ
KQISFALFKEEVAKELGIPVQHQRFWLWAKRQNHTYRPNRPLTLLEEAQSVGHLREVSNK
ANNAELKLFLEVEMGQDSQPVPPPVKTKEEILLFFKLYDPLKEELRYVGRLFVKGTGKPT
EILPKLNELAGFAPDEEIELFEVNLFVCLIDMILCYTINHFNCFLNSPLFFQEIKFEPNV
MCEHIDIKLTFRASQLEDGDIICFQKPLQSGTVKCRYPDVPSFLEYVHNRQVVRFRSLEK
PKEDEFSLELSELNNYDDVVERVASHLMLDDPSKIRLTSHNCYSQQPKPQPIKYRGVEHL
SDMLAHYNQTSDILYYEVLDIPLPELQGLKTLKVAFHHATKDEVVIHTIRLPKQSTVGDV
INDLKTKVELSHQDAELRLLEVFYHKIYKIFPLNEKIENINDQYWTLRAEEIPEEEKDLG
PLDRLIHVYHFTKDSSQNQAQVQNFGEPFFLVIREGETLAEVKARIQKKLQVSDEEFSKW
KFAFLSLGRPTYLQDSDVVSTRFQFQRRDVYGAWEQYLGVEHADNTPKRSYAANQNRHTF
EKPVRIYN
NT seq
3447 nt
NT seq
+upstream
nt +downstream
nt
atgactctcatgactccgcctcccattgacccggaagaggaagagatgctagttccacat
tctgagttggcaactactgaaggacctgaaccaatggatgttgcacctgcagaggctgct
aatacagttgacgcgccagtagttgatgatccaccgtcagcgaggttcacatggacgata
gaaaatttctcgagattgtctggcaaaaagttgtactcggatgctttcttcgttggagga
tataaatggcgtgtgctgatattcccaaaaggaaacaatgtggaccatttgtcaatgtat
cttgatgttgctgattctacagcattgccgtatggttggagcaggtatgctcagtttagc
ctagctgtggttaatcaagttcacagcaagttcaccatgagaaaagatacccaacatcag
tttaatgcacgagaaagtgattgggggtttacatcattcatgcctcttagtgagctatat
gaacctagtagaggctatcttctgaatgatacttgtataattgaagctgatgtggcagtc
cgtaaggttgttgattactggtcacatgattcaaaaaaagaaactggttatgttgggctt
aaaaatcaaggtgctacttgctatatgaattctctactccagacattgtaccacatcccg
tattttagaaaggctgtgtatcatatgccaacaactgagaatgatatgccatcagggagc
atcccgttggctttacagagtttattttataagcttcagtacagtgacaccagtgtagcc
acaaaggagttgaccaagtcttttggttgggatacctatgattcttttatgcagcatgat
gttcaagaactcaatagggttctttgtgagaagcttgaagacaaaatgaagggaactgtt
gtagagggaacaattcaacaactgtttgaaggacaccatatgaactatatagaatgcata
aatgtagactacaaatcaacaaggaaggaatctttttacgaccttcaacttgatgtcaaa
ggctgtcgtgacgtctatgcgtcctttgacaagtatgtggaagtggaacgacttgaaggt
gataacaagtatcatgctgaacagtatgggttgcaggatgcgaagaagggtgtcttattc
attgatttcccccctgttctacagcttcaactaaaacgttttgaatatgatttcatgcga
gatacaatggtgaagataaatgatcgatatgaatttccgttgcaacttgatcttgataga
gaaaatgggaaatatctatcaccccaggcagacagaagcgttcgcaatctttatactctt
cacagtgtactggttcacagtggtggggtccatggcggacattattatgcctatattcga
ccaacactttctgatcaatggctgaaatttgatgatgaacgagtaactaaagaagacatg
aagagagcgttggatgagcaatatgggggtgaagaagagttacctctagcaaatcctggg
ttcaataactccccctttaaatttacaaagtattcaaatgcatacatgcttgtgtatata
cgtgaaagtgacaaagagaaaataatctgtaatgtggatgagaaggatgtggcagagcac
ctgaggattaggttgaagaaagaacaagaggaaaaggagcaaaaaaggaaggagaaagca
gaggcacatttatatactattataaaggttgcccgtgatgagaatcttcatgaacaaata
gggaaaaatatattttttgacctagtggatcatgataaagtacgtagtttccgtatacaa
aagcagatctcatttgctcttttcaaggaggaagtagccaaagaattgggtatacctgtg
caacatcaacgtttctggctttgggcaaaacgccaaaatcatacttaccgtccaaatcgt
ccattgactcttttagaagaagctcaatctgttggacatttgagagaagtatcaaataag
gccaacaatgctgagcttaagttgtttttggaggtagaaatgggacaggattcacagcca
gttcccccacctgtgaaaactaaggaggagatcctacttttttttaagctttatgaccct
ttaaaagaggagcttcgctatgtcggacggctctttgtgaagggtacaggaaagcctaca
gaaatactgccaaagttaaatgagcttgctggctttgcacctgatgaagaaatagaactg
tttgaggtcaatctttttgtctgtttaattgatatgattttatgctatactattaatcat
tttaattgttttctaaactcccctcttttctttcaggaaatcaagtttgaacctaatgtt
atgtgtgaacatattgatataaagctaacatttcgggctagtcagcttgaagatggagac
attatttgctttcagaaacctcttcaatctggaactgtaaaatgtcgttatccggatgtt
ccatcttttctggaatatgttcataatcgtcaggttgtgcggtttcgttcactggagaaa
cccaaggaggatgagttctcattggaattgtcagaactcaacaattatgatgatgttgtc
gaaagggttgcgtctcatttgatgttagatgatccatctaaaatcaggcttacatctcat
aattgttattcccaacaacccaaacctcaaccaatcaagtaccgaggagtggaacatctg
tccgacatgctggcccactataatcagacttctgacattttgtattatgaggtactcgat
attcctcttcctgaactgcaaggtttgaaaaccttaaaggttgcttttcatcatgcaaca
aaagatgaagtagtcatacataccattagattgccaaaacaaagcactgtgggcgatgtg
attaatgacctaaagacaaaggtggagttgtctcaccaagatgcagagcttcgtttgctt
gaggttttttaccacaagatttacaagattttccctctgaatgaaaaaatcgagaacatc
aacgatcagtactggactttacgggctgaggagattccagaagaggaaaaggacctaggt
cctctggatcgcctaattcatgtttatcattttactaaagactcgtctcagaaccaggct
caagttcaaaactttggggaacccttttttcttgtgattcgagagggtgaaacattagct
gaagttaaagcacgcatacagaaaaagctacaggtttcagatgaggaattttcaaagtgg
aagtttgcatttctctctttgggtcgtcctacttatcttcaggattctgatgtggtctcc
acccgttttcagtttcagagaagagatgtttatggtgcctgggaacagtacctaggagtg
gaacatgctgacaatacacctaaacgctcatatgctgcaaatcagaaccggcacacattt
gagaaaccagttagaatctacaactag
DBGET
integrated database retrieval system
