Bidens hawaiensis: 143542179
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Entry
143542179 CDS
T11418
Name
(RefSeq) uncharacterized protein LOC143542179
KO
K08518
syntaxin-binding protein 5
Organism
bhw Bidens hawaiensis
Brite
KEGG Orthology (KO) [BR:
bhw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bhw04131
]
143542179
Membrane trafficking [BR:
bhw04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
143542179
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
143542179
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR3_1st
WD40_WDHD1_1st
Beta-prop_RIG_2nd
Beta-prop_EML_2
WD40_CDC20-Fz
ANAPC4_WD40
Beta-prop_THOC3
WD40
WDR55
Beta-prop_WDR36-Utp21_1st
Beta-prop_VPS8
WD40_Prp19
Beta-prop_WDR5
Beta-prop_Aladin
Synaptobrevin
Beta-prop_HPS5
eIF2A
Beta-prop_WDR3_2nd
Beta-prop_EML
Utp8_b_propeller
WD40_MABP1-WDR62_2nd
Lgl_C
NBCH_WD40
ABC_tran_Xtn
Beta-prop_Nup120_160
Motif
Other DBs
NCBI-GeneID:
143542179
NCBI-ProteinID:
XP_076890942
LinkDB
All DBs
Position
Unknown
AA seq
1135 aa
AA seq
DB search
MFAKKLLQKATTKLQNNHPHHQNLKGCLTPQDLEFQTPLHYGIPSTASLLAFDPIQRLLA
LATLDGRIKVIGGDNIEALLISPKQLPFKYLEFLANKGFLVTVSNDNEIQVWNLENRSIA
STLQWSSNITSFSVIYGSFFMYVGDDNGLMSVLKHEEDGQLLLLPYHISAQSLTEAAESS
CPDHQTVVGVLHQPSSSGNRVLVAYESGLIILWDIFEAQVVVVRGDKDLELKNGVLGQPE
HDLEEKEITALCWVSSNGTVVAAGYIDGDIMFWKTSTTESSKKQKAAASNNNVVRLQLSS
AERKLPVIVLHWSANTKSQNDCDGQLFVYGGDEIGSDEVLTVLSLEWSPGMETLRCVVCA
EVTLIGSFADMSLLPSAINNNGADLLVLTSPGHLQLVNHKDLSALTSQHEKRITLSSLEC
PAVIPTLNPVISTAKLISLVGNENTSKFLLEIATNLKASPTQKSEGGGWPISGGIVYQFN
SPEGYVIERVYIAGYMDGSVRIWDATSPVLSILCVIGAMKDVEVSGSTSPVSELSLCSST
SRLAVGNQLGLIRVYNLNSSSEETDLHVVTGTKQQVHKQPEGGGPMCIASFHLLDSPVQA
LQYMDHGVKLAVAHECGRVAVLDMNSFSVSFLTEASPNPSSPVISMTWKSFVYNGGNVKS
PKGAGPKSVDKNLEKLMFVATKDAKLYVFDGSNHMINSKPMQLKKDAAAISMHIIGKYDH
SVILFYARMAKVILILICHALWYLFYERNIFNNNTTVMYILSEGSTSIVESVEQKESTQL
TKDVAVRNEPANETDHIKSGQNAMDSLVLLCCKDALRLYRLKSVVQGNEKPLLKVKLEKH
CCWTSTFKKDEKTCGLVLLYQSGELEIRSLPDLELVKVASLMSTLRWSYKANMQRTMCST
ENGQIAMINGSEVAFLSLLKSDDGRRVMESFPSLHDKVLAAAVEAVISSSQHQKRKQGIP
VALVNILKGFKGGKTNSNVNFPEEYKLGSNNLDRIFSKNPFPDPLESNVNDQEEIELDID
DIEIDEPVSVSMPASSSHSKLKEETGKKTEREMLFDGDNEEPRVRTREEIIAKYRKNAGD
ASSIAAQARNKLLERQEKLDRISKRTQDLSNEAEDFASLANELVKAMERRKWWQI
NT seq
3408 nt
NT seq
+upstream
nt +downstream
nt
atgtttgcgaagaaactgttacagaaggctactaccaagcttcagaacaatcatcctcat
catcagaatcttaaaggatgcctcacaccacaagatttggagtttcaaacaccactccat
tacggtatcccatctaccgcatcacttctcgcctttgatcctattcagcgtctattagcc
cttgcaacattagatggcaggataaaagtgattggtggtgataatattgaagcactcctc
atttctcctaaacaattacctttcaagtatttggagtttctagccaacaaaggtttccta
gtcaccgtctccaatgacaatgaaatacaagtgtggaatctcgaaaataggtccattgct
tctactttgcaatggagctccaatattacaagtttctctgtcatttacggctccttcttc
atgtatgttggagatgataatggtttgatgtctgttttaaagcatgaagaggatggacaa
cttttattactaccgtatcatatttcagcccaatcccttactgaagcagctgagtcatca
tgtccagatcatcagactgttgttggagttcttcatcaaccgtcttcttctgggaataga
gttttggttgcatatgagagtggcttaattatattatgggatatatttgaagctcaagtg
gttgtagttagaggtgataaggatcttgaactaaagaatggagttcttggtcaaccggaa
catgatttggaggaaaaagaaataactgctctttgttgggtgtcttctaatggcacagtt
gttgctgctggatacatagatggagatatcatgttttggaaaacttcaaccactgaatct
agtaaaaaacaaaaagctgcagcatcaaacaataatgttgtaaggttgcagttgtcatct
gctgaaaggaaactacctgtcattgtgttgcactggtcggcaaacactaaatcccaaaat
gactgtgatgggcaactgtttgtttatggaggtgatgaaattgggtctgatgaagtatta
acggttttgagccttgaatggagccctgggatggaaaccctaagatgtgtggtttgtgca
gaggtcactcttattggctcgtttgctgatatgagtttgttaccgagtgcaataaataat
aatggtgctgatttattagtcctcacaagcccaggacatctgcagttagtcaatcataag
gatttatcggccttaacatctcaacatgaaaaaagaattactttatcttctctagaatgt
cctgcagttatacctacacttaatccagtcataagtacagcaaaacttatctcattagtt
ggcaatgaaaacacttcaaagtttcttttggagatagctacaaatctgaaggccagtcca
acacaaaaatctgaggggggtggctggcccatatcaggaggcatagtgtatcagtttaat
tctcctgaaggttatgtgatagagagagtttacatagctggttacatggatggatctgtt
agaatctgggatgccacctcaccagtcttgtcaatcctttgtgttataggagcgatgaaa
gatgtggaagtgagtggttcaacttctccagtttctgaactgagcttgtgctcctcaact
tcgcgattagcagttggtaatcaacttggtttgattcgtgtgtataatctcaattcgagc
tcagaagagacagaccttcatgttgtcacgggaaccaaacaacaagttcataaacaacct
gaaggcggaggtcccatgtgtatcgcttctttccacctcctcgattcccctgttcaagct
cttcaatatatggaccatggagttaagctagctgttgcacatgaatgtggtcgtgttgca
gtgcttgatatgaactcattctctgtttcattcttaactgaagcatcacctaatcctagc
agtccagtgatttccatgacatggaaatcatttgtgtataatggtggtaatgttaaaagc
cctaaaggtgcgggaccaaagagtgttgacaaaaatctagagaaattgatgtttgtagct
accaaagatgcaaagttatatgtgtttgatggtagtaatcacatgatcaactctaaaccg
atgcaattgaagaaagatgcagcggctatatccatgcatattataggcaagtatgaccac
tctgttattttgttttatgctagaatggctaaagttattttgatcttaatatgtcatgct
ttatggtatttgttttacgaacgtaatatatttaacaataatacaactgttatgtatatt
ctttcagagggaagtacctccatagttgagtcagtggaacaaaaggagtcaacacagttg
accaaggatgttgcagtcagaaatgaacctgcaaatgaaaccgaccatatcaaatcaggg
cagaatgcaatggattcactcgttttactctgttgcaaggatgctctgcgcttatatcgt
ttaaaatctgtggttcaggggaatgaaaaaccgttgcttaaagtaaaacttgagaagcat
tgctgttggacttcaacttttaagaaagatgaaaaaacgtgtggattagtattactatat
caatctggcgaattggaaatcagatccttgccagacttagaactggtgaaagtagcctca
ttaatgtcaacattaaggtggagttacaaggcgaatatgcagaggactatgtgttctaca
gagaacgggcagattgccatgataaatgggtcggaagtggcatttctctctttactgaaa
agtgatgatggccgcagggttatggaatcttttccttcacttcatgataaagttcttgca
gctgcagtagaagccgtgattagcagttctcaacatcaaaagagaaaacagggtatccct
gtagcacttgttaatattcttaaaggatttaaaggaggaaaaacgaatagcaacgtcaac
tttcctgaagaatataagttaggctccaacaatctggacagaatcttttcaaagaatcca
tttccggatccacttgaaagtaatgttaatgatcaggaagaaatagagcttgatatagat
gacattgaaatcgacgaacctgtatctgtatccatgcctgcctcgtcatcacattcaaaa
ctaaaggaggaaactggaaagaaaactgagagagaaatgctatttgatggtgataatgag
gaacctagagtgaggacacgcgaagagattattgctaaatatagaaagaatgcaggggat
gcttcttcaattgctgcacaagcaagaaacaagcttttagagcgccaggaaaagcttgat
aggatcagcaaaaggacccaagatctaagcaacgaagcagaagactttgcgtccttagca
aacgagcttgtaaaggcaatggagcgtagaaaatggtggcagatatga
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integrated database retrieval system
