Bidens hawaiensis: 143542218
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Entry
143542218 CDS
T11418
Name
(RefSeq) uncharacterized protein LOC143542218
KO
K08518
syntaxin-binding protein 5
Organism
bhw Bidens hawaiensis
Brite
KEGG Orthology (KO) [BR:
bhw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bhw04131
]
143542218
Membrane trafficking [BR:
bhw04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
143542218
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
143542218
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR3_1st
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_THOC3
ANAPC4_WD40
WD40_CDC20-Fz
WD40
Beta-prop_WDR36-Utp21_1st
WD40_Prp19
WDR55
Beta-prop_VPS8
Beta-prop_WDR5
Synaptobrevin
Motif
Other DBs
NCBI-GeneID:
143542218
NCBI-ProteinID:
XP_076890968
LinkDB
All DBs
Position
Unknown
AA seq
1109 aa
AA seq
DB search
MFAKLFHRPPPESQSSLPPKDAPQLNDFEPHVVVHYGIPSTASILAFDPLQHLLAVGTLD
GRIKLIGGDNIECLLISPNTVPFKYLEFLENQGYLVSVSNENVVQVWDLEQRRLTSNLQW
GSNISAFSVVCGTNYMYLGDEYGYLSVLKFNFEEGYIQQMPYQIPADIIADEASIQVPDQ
QSVVGLLAQPCSSGKRVLIAYQDGVIILWDISEDKAILVRGHTDLQLNYEIVIHSTSDIR
HNKLTNSSNEEQIEKEISALCWVSSDGSILAVGYVDGDIILWNLPTAISTNNQKANKSSD
NGVKLRLSSGDRRLPVIVLHWSNSQHSGSAGQLFVYGGDDIGSEEVLTILYLDFSSGLES
LKCVKRLDLTLNGSYADIELVRVPESSDTTLFVLTNPGQLHVYVEECLTGLISAPDMKHA
VNAVQFPVTIPTVEPYMTISKLCLVDSEDLQRALKETVLAAKPQSSSPTSTGDVKWPVRG
GFLSQLSSAENIGVERIYMAGYQDGYVRIWDATFPVLSPIFVLGLQVEGTEISGASEPIS
ALEFNSTTSSLAVGNDCGLVCLFKLVGESEKLNTHLVTETKCEEIDLHHGNGWHSTAVFS
LIKSPVRSLQYTFCGAKIIVGYECGKVAVLDVISSSVLFLTDCLVSDNSPVVSVAIKTYS
QTHTNDPEQSGDTSSKDPEKEVAFILTKDAHVILVDINSGDKICCQSVNPKQSTAISMHL
LDEKFAVPDLSEQNPVNSPHAPTDVKESLQSGTDSESDATEEEVNTSNEATELWKTFVDS
LILVSCADSILLFSTKSLIQGRSNFMRKIDLEKQCCWATIFKNNEVESGVILVYSSGVVE
IRSLPDLNVLAETSIMSILRWNFKTNMEKTMSCFGNTNITMVYECEFAVISLFTSENDFR
IPEALPRLHDKVVAEAAEAALKFSLSQKKQAAPTGLIGGIIKGIRKKENENTYIEETRDA
LVPKLDALFSRSPFSISDLDLDLGDEVDAPIKLVVEKLVVEPLSPGPASPTQTKAKTEKN
KQMEREKLFEGGSEPKARTADEVKAKYRKGGTGDTAAVALEAKDKLLERQMKLEKLKENS
EELASGSENFASLAGELVKQMENRKWWQL
NT seq
3330 nt
NT seq
+upstream
nt +downstream
nt
atgtttgccaaattatttcacagacctccaccggaatcccaatcttctcttcctcctaag
gatgctccacaattgaatgactttgaaccacatgttgttgttcattatgggattccgtca
actgcatcaatcctggcttttgatccccttcagcatctactggctgtaggcacactggat
ggcaggataaagttgattggtggtgataatattgaatgccttctaatatctccaaacaca
gtacccttcaaatatctagagttcttagaaaaccaaggttatctagtcagcgtctcaaat
gaaaatgtagtgcaggtgtgggatctagaacagaggcgattgacttcaaatttacaatgg
ggatccaatataagtgcattttctgtagtttgtggcactaattacatgtatcttggagac
gagtatggctatttgtctgtattaaagtttaactttgaagaagggtatatccaacaaatg
ccctatcagattcctgctgatatcatagctgatgaagcctcgattcaagtacctgatcaa
caatctgttgtgggcctacttgcccaaccttgttcctcaggaaaaagagtgttgattgca
tatcaagatggagtgataattttatgggatatttctgaagataaggctatacttgttaga
ggccatactgatctccagctaaactatgaaattgttattcattccacaagtgatatcaga
cataataaattaaccaatagttcaaatgaagagcagatagagaaggagattagtgctctt
tgttgggtttcttctgatgggtcaatacttgctgttggctatgtagacggagatattata
ttatggaatttaccaacagcaatatctaccaataatcagaaagcgaataagtcatctgat
aatggagttaagttaagattatcttcaggtgatagaagactcccagtcattgttctccat
tggtcaaatagtcaacatagtggttctgccggtcaactttttgtctatggaggtgatgat
attggatctgaggaagtcctaacgatcttgtatcttgatttttcatctggactagaatcc
ctgaagtgtgttaagcgattagatttaacacttaacggttcttatgcggatatagaattg
gtacgtgtgcctgagagtagcgataccacactttttgtgttgaccaatcctggtcaactg
catgtctacgttgaagagtgcttgacaggattgatatctgctccagatatgaaacatgct
gtaaacgcagttcaattccctgtaactataccaacagttgaaccttatatgaccatctca
aagctctgtttggtggacagcgaggatttgcaaagagctctcaaggagacagttttggct
gcaaaacctcaatcatcatctcctacatccacaggggatgtaaagtggcctgtgcgtggt
ggctttctcagtcaactatcctcagctgaaaatattggagttgagagaatatacatggca
gggtatcaagatggctatgttcgaatatgggatgccacatttcctgttttgtcgcctatt
tttgttctaggattgcaggtggaaggtactgaaatttctggtgcaagtgaacccatatca
gccttggagttcaattctacaacatcaagtttagctgttggcaatgattgtggtctggtt
tgtctatttaagctagttggagaatctgaaaagttaaacacacaccttgtgacggaaacc
aaatgtgaagaaattgatttgcaccatgggaacgggtggcattcgaccgctgtcttttcc
ctgataaaatctccagtacgaagcctacaatacacattttgtggagctaaaataattgtt
ggatatgaatgtggtaaggttgctgtacttgatgttatatcatcatcagtattgtttctc
acagattgcctagtcagcgacaattctccagttgtttctgtggccataaaaacatattca
caaactcataccaacgatcctgagcaatctggagacacatcatcaaaagatccagaaaag
gaagtggctttcatattgactaaagatgcacatgtcatccttgtggatattaatagtggt
gacaagatctgctgtcagtcagtaaaccctaaacaatcaactgcaatctcaatgcacctt
ttagatgaaaaatttgccgttccagatttgtctgaacagaatcccgtgaactcgccacat
gccccgacagatgtaaaagagtctttacagtctggtacggattcagaaagtgatgcaact
gaagaagaagtaaatacctcaaatgaagccactgaattatggaagacttttgttgactca
ctcattttagtttcttgtgccgattcaatacttttgttttcaaccaagtcactaattcag
gggcggtcaaactttatgagaaaaatcgatttagagaaacaatgctgctgggctacgata
ttcaagaataatgaagtggagtctggagtgattttagtttattccagtggagttgttgag
atcaggtccttgccagatcttaatgtgctggcagaaacttccataatgtctattctcaga
tggaatttcaagaccaatatggagaagacaatgagttgttttggtaatacaaatataacc
atggtgtatgaatgtgaatttgctgttatatctcttttcacctctgaaaatgacttcagg
atcccggaagctttacctcgccttcatgataaagttgttgcagaagctgcagaggctgct
cttaagttctctcttagccagaagaaacaggctgcaccaacaggattaattggtggtatc
atcaagggtataagaaaaaaggaaaatgaaaatacatatattgaagaaacccgtgacgct
cttgttcctaagctagatgccttgttttcaaggtccccgttttcaatttctgatttagat
ttggatttgggagacgaagttgatgcaccaatcaaattagttgtagaaaaacttgtggtg
gaacctctttctcctgggccagcatctccgactcagacaaaggcaaagacggaaaaaaac
aaacagatggagagggagaaattatttgaaggtggctcagaaccaaaagctaggacagct
gatgaagttaaggccaaatatagaaagggagggaccggggatacggcggctgtagctcta
gaagcaaaggacaagcttctcgaacgccaaatgaaacttgagaaactaaaagagaactcg
gaagaactagcaagcgggtccgagaactttgcatctttggccggtgagcttgtaaagcaa
atggagaatcgaaaatggtggcaattatga
DBGET
integrated database retrieval system
