Bidens hawaiensis: 143542381
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Entry
143542381 CDS
T11418
Name
(RefSeq) eukaryotic initiation factor 4A-3-like
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
bhw Bidens hawaiensis
Pathway
bhw03013
Nucleocytoplasmic transport
bhw03015
mRNA surveillance pathway
bhw03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bhw00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
143542381
09122 Translation
03013 Nucleocytoplasmic transport
143542381
03015 mRNA surveillance pathway
143542381
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bhw03019
]
143542381
03041 Spliceosome [BR:
bhw03041
]
143542381
03009 Ribosome biogenesis [BR:
bhw03009
]
143542381
03012 Translation factors [BR:
bhw03012
]
143542381
Enzymes [BR:
bhw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
143542381
Messenger RNA biogenesis [BR:
bhw03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
143542381
mRNA cycle factors
Stress granule specific factors
143542381
Spliceosome [BR:
bhw03041
]
Complex C
Other components
EJC/TREX
143542381
Ribosome biogenesis [BR:
bhw03009
]
Eukaryotic type
90S particles
Helicases
143542381
Translation factors [BR:
bhw03012
]
Eukaryotic type
Initiation factors
eIF-4
143542381
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_30
Cas3-like_C_2
NAT10_TcmA_helicase
TniB
Motif
Other DBs
NCBI-GeneID:
143542381
NCBI-ProteinID:
XP_076891096
LinkDB
All DBs
Position
Unknown
AA seq
408 aa
AA seq
DB search
MAGTSVVPANRGRRNTMVDDEKLVFETSKGVEPIMSFDQMGIKDDLLRGIYQHGFEKPSA
IQQRAVRPIIEGRDVIAQAQSGTGKTSMIGLTVCQIVDTSSREVQALILSPTRELAAQTE
KQILAIGDFISIQAHACIGGKSVGEDIRKLENGVHVVSGTPGRVCDMIKRRTLRTRAIKL
LILDESDEMLSRGFKDQIYDVYRYLPPELQVCLVSATLPNEILEMTSKFMTDPVRILVKR
DELTLEGIKQFFVAVERENWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMRENNFT
VSAMHGDMPQKERDAIMEEFRSGVTRVLITTDVWARGLDVQQVSLVINYDLPNNRELYIH
RIGRSGRFGRKGVAINFVKTDDIKILRDIEQYYSTQIDEMPMNVADLI
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atggcgggaacatccgtggtaccggcgaaccgtggccgtcgtaacacgatggtggacgac
gagaagctggtgttcgagacatcaaaaggggttgaaccaatcatgagttttgaccagatg
ggtatcaaagacgatcttcttcgtgggatttaccagcacgggtttgagaagccatcggct
attcaacagagagctgttcgcccaattattgaaggccgtgacgtcatcgctcaggctcag
tccggtaccggaaagacgtcgatgattgggttgaccgtgtgccagattgtggatacgtct
tccagagaggtacaagctttgattctatcacctacaagggagcttgcagctcaaacagag
aaacaaatactggctattggtgatttcatcagtatacaagctcatgcatgcattggtgga
aaaagtgtcggggaggacattcgaaagttagaaaatggagttcatgttgtttctggaaca
cctggcagagtctgtgacatgatcaagagaagaacattgcgaactagagctataaaatta
ctaattcttgatgaatctgatgaaatgttgagccgaggctttaaggatcaaatttatgat
gtttatcgataccttccaccagagcttcaggtttgtttggtgtctgctacccttcctaat
gaaatcttggaaatgaccagcaaattcatgactgaccctgttcgaattcttgtgaaacgt
gatgaattgactcttgagggaataaaacaattcttcgttgcagttgaaagagaaaattgg
aagttcgatactctctgtgatctttatgatactcttacaattacacaggctgtaattttc
tgtaacacaaagcgaaaggttgattggttaaccgaaaagatgcgtgagaacaacttcact
gtatcagcaatgcacggagacatgcctcagaaagagagagatgcaattatggaagagttt
cggtctggtgttactcgtgttttgattaccaccgatgtgtgggctagaggattggatgtt
caacaggtttctctggtcattaattatgacctcccaaataatcgagagctttacattcat
cgtatcggtcgatctggtcgttttggacgaaagggtgttgctataaattttgtgaaaact
gatgatatcaagattctgagagatatagagcagtactacagtacccagatcgatgagatg
ccaatgaacgtggcggatttgatatga
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integrated database retrieval system
