KEGG   Bidens hawaiensis: 143543440
Entry
143543440         CDS       T11418                                 
Name
(RefSeq) protein ROOT INITIATION DEFECTIVE 3-like
  KO
K14829  pre-rRNA-processing protein IPI3
Organism
bhw  Bidens hawaiensis
Brite
KEGG Orthology (KO) [BR:bhw00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:bhw03009]
    143543440
Ribosome biogenesis [BR:bhw03009]
 Eukaryotic type
  Pre-60S particles
   5-FMC complex
    143543440
SSDB
Motif
Pfam: Beta-prop_WDR3_1st WD40 Beta-prop_WDR5 Beta-prop_THOC3 WD40_Prp19 WD40_WDHD1_1st EIF3I WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_WDR3_2nd Beta-prop_TEP1_2nd NBCH_WD40 Beta-prop_WDR36-Utp21_2nd ANAPC4_WD40 WDR55 Beta-prop_EML Beta-prop_Vps41 Beta-prop_ACSF4 Beta-prop_IP5PC_F Beta-prop_TEP1_C Beta-prop_WDR90_POC16_2nd WD40_Gbeta Beta-prop_NOL10_N Beta-prop_CAF1B_HIR1 Beta-prop_DCAF4 PEP5_VPS11_N Beta-prop_SPT8 WDR90_beta-prop_4th
Other DBs
NCBI-GeneID: 143543440
NCBI-ProteinID: XP_076891877
LinkDB
Position
Unknown
AA seq 405 aa
MPSPPQLPETILKATPNGPITVYDPYTTTVLARYNGSQCPRNGITIIGDNQFASSHVSPE
TGVGSIHLYYWWSPSFTQNIPLPEPVAPLAATTDGSYIFSGGVSGRIHSVMLPSGNLIHS
FSAHQKPISCIMINCDGSLIISGSEDGTIAVTPTLLLLDCSIDTKSKGNKFKRFVGHELP
VTGLATGSGRSDGIIISSSLDWTCKVWSVVTGAHLDTVMFPGEIGSMVLDPSETELYTGG
TDGMIYKRKLKVETRKEVARGGDTVVWGGVYDHAVVTMVMLNYGKILLTVTEDGKIYLWE
VNSGKMLSGFVETVGGGVSDIVVMKYGGGFGTRGVENGESGGYCGGAHVGKAVNKVMEME
EAVKAVAEDRGRAISDLESAIEINEKLLNLMLEEADAISELETIK
NT seq 1218 nt   +upstreamnt  +downstreamnt
atgccatcaccaccacaattaccggaaacaatcctaaaagccacccctaacggcccgatc
accgtctatgatccatacaccacaaccgtcttagctcgatacaatggcagccaatgccct
cgtaacggcattaccataatcggagacaatcaattcgcaagttcacatgtctcacccgag
acaggtgttggttctattcatctttattattggtggtcaccgtcgttcacacaaaatatt
cctctgccagaaccagtagctccactagctgctactacagatggatcatacatattttca
ggtggagtttccggtcgaatacactcggtaatgctaccttccggtaacctaatccactct
ttttccgctcaccagaaacctatatcttgtatcatgatcaattgtgatggatcgttgatt
atttccggtagtgaggatggaacaatcgcggttactccgacactcctgcttctcgattgt
tctattgatacgaaatcgaagggtaacaagtttaaaagattcgtcggacatgaattgccc
gtgactggattagccaccgggtcagggagatccgatgggattattatatccagctcattg
gactggacatgcaaagtgtggagtgttgtgactggggcccacctagatacagtgatgttt
ccaggtgagatagggtccatggtgttggacccgtctgagacagagttgtatacgggtggg
acagatgggatgatatataaaaggaagcttaaagtagagacaagaaaagaggttgcacgg
ggtggagatacggtcgtgtggggaggggtgtacgaccatgcagttgtgacaatggtgatg
ttaaattatggtaaaatacttttaacggttaccgaggatggaaagatttatctatgggaa
gtgaatagtggtaaaatgttaagtggttttgttgagacggttggtggcggtgttagcgac
attgtggtgatgaaatatgggggcggttttgggacaagaggggttgaaaatggggaaagt
ggtggttattgcggtggggcgcatgtggggaaggcggtgaataaggtgatggaaatggaa
gaggcggtgaaagcggtggccgaagaccgaggaagggcgattagcgacctggaatcggca
attgagattaatgaaaaattgcttaatctcatgcttgaagaagctgatgcaatttctgaa
ttagaaaccataaaataa

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