Bidens hawaiensis: 143544371
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Entry
143544371 CDS
T11418
Name
(RefSeq) uncharacterized protein LOC143544371
KO
K14794
ribosomal RNA-processing protein 12
Organism
bhw Bidens hawaiensis
Brite
KEGG Orthology (KO) [BR:
bhw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bhw03009
]
143544371
Ribosome biogenesis [BR:
bhw03009
]
Eukaryotic type
90S particles
Other 90S particles
143544371
Pre-60S particles
Other pre-60S particles
143544371
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HEAT_RRP12_N
RRP12_HEAT
HEAT_GCN1
HEAT_Maestro
ParcG
Motif
Other DBs
NCBI-GeneID:
143544371
NCBI-ProteinID:
XP_076892609
LinkDB
All DBs
Position
Unknown
AA seq
1107 aa
AA seq
DB search
MKKQSAGDSPESFTGDSDICQQLLDRYGKSAAPQHRHLCATAAATRSIIQSESLPLSPLS
YFAATIETLSDTSKSTNDADAVSALSSFLAIVLPLVPEKSIATSKAAEAVEIVVEMMESG
SEGLSVSTVRALVKCLGVLMEFCDLEDWEAVKLGFRMLMKYSIDKRPKVRKCAQECVVKL
FKTFKSPLVIKSASKLVLTSFKTFMSSAVEIVASKSVDGGKDDSSSKGEHLEVLHMLNLL
KLLVPCLPSKVISEAVIELQKAISAKFSALTRHVFDLMDDILKFLEAGSMIPNTVEIVAI
LSSYISKKQNPVDTIFSAAALLDTFLTKFQIGDPTKWNDHYSLIIGSIAGLLTSESTAMK
ASNILKEMINHHIDVEVLLSSETDENNVESKASRLLKSLCDTLLKVLYSNKGIPNEHALA
VISVLFVKLGKSSHIYLESLLLKLATIMTATTGNTSDIKHLHECMGSAVIAMGPEKLLDV
LPISIDAKVQTCSNVWLIPILKEYVAGSSLGFFMENIVPLGESFQEESQKVKKSVIGGEL
QTYASGCWGLLPAFCRYPTDTHKKFRSLVKLLIPCIRKDAFMLEDIAIAVQLLVKQNRSP
VGADQGDDEHSKFPKLSYSKKVASKNIKALESCSEELLKAFTKVFFKVSTKKRVFVKDTI
GCLALITESATIKKIFISSIKRLEQKVSVDKVNAKRCLILELASSVVGAAGLDLIDLIYN
FIKQSLQEEDENIQREAYATLYRILEGSSKFCSSKFEELTELILGLKSPDNVTSLRWRLS
CFKNLIIHSMEIALDEENPYGFRMLNEFIVTLKDGKEESRKVAYDILLVTSSTLQKASSS
LEKSPYYEFVSMIMGYLSGSSPHIKSGAVSALSLVIYNDSKICTLMPDLVPSILELLHSK
TIEVIKAVLGFLKVLVLSLQVNDLQNFLSDILSGLLPWSSVSRHHFKSKVTVILEIMMRK
CGSASVKSLVPAKYLDFVKDVFENRQGKTNSQETDATGTEAGLSETAHNSKPKFKPKAAG
SFTKEEYSTDTRKRKRDDRNHSDKPNKFSPRGNNRTKDVKRSGFDKSSDRPSQGGFKRKN
PSFKNDNKSGGKKQKQWNKGGKKNASG
NT seq
3324 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaacaatccgccggagactcaccggaatccttcaccggagactccgacatatgc
caacaactcctggaccgttacggcaagtccgccgcacctcaacaccgccacctctgcgcc
accgccgccgccacccgctccatcatccaatcggagtcacttcctctctcacctctctct
tacttcgccgccacaattgaaactctctccgacacctcaaaatcaactaatgacgccgat
gcagtgtcggcgttatcgtcgtttttggctattgtgttgcctttggttccagagaagtct
attgcgacgtctaaggcggccgaggctgtggagattgttgttgagatgatggagagtgga
tccgaggggttgtcggtttcgacggttagggcgttggttaagtgtttgggggttttgatg
gagttttgtgatttggaggattgggaagcggttaagttggggtttcggatgcttatgaag
tattcgattgataagcgtcccaaggttagaaagtgtgctcaagaatgtgttgtgaagctc
ttcaagacttttaaatctcctcttgtgattaaaagtgcaagcaagttggtgttaacttca
tttaaaacttttatgtcgtcggcagttgaaatagttgcctcaaaatctgtagatggaggt
aaagatgatagttcatcgaaaggtgaacacttggaggttcttcatatgttaaatcttttg
aaacttctggtcccttgtttgccaagcaaagtgatatcagaagctgttatagaattacag
aaggctataagtgccaagttctcagcattaacgaggcatgtttttgatcttatggacgac
atacttaaattcttggaagctggatctatgattcccaatactgtagaaattgtcgcaata
ctttcaagttatatatctaagaaacagaatccagtggacactattttttctgcggcagcg
ctacttgatacttttcttaccaaatttcaaatcggagacccaaccaaatggaatgatcat
tattcattaatcatcgggtctatagcaggtcttctgacatctgagtcaactgctatgaag
gcttcaaatattttaaaagaaatgattaaccatcatattgatgtagaagtccttttgagt
tcagagactgatgagaataatgttgagtccaaggcatcaagactattgaaatcgctctgt
gatacacttcttaaggttctatactccaataaaggaattccaaatgagcatgctttggct
gtcatctctgttttatttgtcaaacttgggaagagttctcatatctacttggagagttta
cttctgaagctcgccactattatgacagctacgactggaaatacttctgatataaagcat
cttcacgagtgtatggggtctgctgtgattgctatggggccagagaaactacttgatgtg
ttacctatttccattgatgccaaagttcaaacctgctcaaatgtttggttgatacctatt
ttgaaggaatatgttgctggttcatcattgggattctttatggagaacatagtacctcta
ggtgaatcatttcaagaggagtcgcaaaaagttaaaaagtcagtaattggaggtgaactg
cagacttatgccagtggttgctggggattattgccggccttttgtcgctatccaaccgac
acacacaaaaagtttcgatctttggtgaaactccttattccatgcatcagaaaagacgct
tttatgcttgaggatattgccattgcggtgcagcttcttgtgaagcaaaacagaagtccc
gttggtgctgatcagggtgatgacgagcattccaaatttccaaaactgagttactcaaaa
aaagttgcttctaaaaacattaaagctttggaatcatgttcagaggagctgctcaaggct
tttactaaagttttcttcaaagtgtcgacgaagaaacgtgtttttgtgaaggataccatt
ggatgcttggcactaatcactgagtctgcgacaataaaaaagatcttcatttcatcaatt
aaaagattggagcagaaggtttctgtagataaagtaaatgcaaaaaggtgtcttatcctt
gagctagcatcatcagttgttggagcagctggcttggatttaattgatcttatatacaac
tttatcaagcagagtttgcaggaagaggatgaaaacatccagagggaagcatatgccact
ctgtacagaattttggagggatcttctaagttctgctcttcaaagtttgaggaacttacc
gagttaatacttggtttaaagtcccctgataatgttacttcacttagatggcgactttcc
tgcttcaagaacttgataattcactcaatggagatagcgttggatgaagaaaacccatat
ggttttcgtatgctaaatgaatttatagtgacattgaaagatggcaaggaagaaagtaga
aaagttgcatatgacatccttctcgtgacaagctctaccttgcaaaaagcatcatcctca
ctcgagaaaagcccttattatgagtttgtcagcatgataatgggctacctctctggatca
tctcctcacataaaaagtggcgctgtctctgcgttatctttagtgatctataacgactca
aagatttgtactttgatgcctgatcttgtcccgtcaatccttgagttgctgcatagtaaa
accattgaagttataaaagctgttctaggctttctcaaggtgttagttttgagtcttcaa
gtgaatgacttgcagaactttctatctgacattctaagtggacttctgccctggtcatct
gtttctcgccatcattttaaatccaaagtaacagtcatcctggagattatgatgcgaaag
tgtggttctgcgtcagtcaaatctctagtgcctgctaaatacctagatttcgtgaaggat
gtctttgagaaccgtcaaggcaaaacaaattcccaggaaaccgacgcaactggaacagag
gcgggactttctgaaacagcccacaacagtaagccaaagtttaaacccaaggctgcaggt
agtttcaccaaggaggaatattcaacagatactcgtaagagaaagagggatgataggaac
cactcagacaagcctaataaattttcacctcgagggaataataggacgaaggacgtaaaa
cgttctggttttgataaatcaagtgaccgtccgtcacaaggtggttttaaaagaaaaaac
ccgagttttaaaaatgataataaatcaggtgggaagaaacagaaacagtggaataaagga
ggcaagaaaaatgcatctggttga
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