Bidens hawaiensis: 143544576
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Entry
143544576 CDS
T11418
Name
(RefSeq) putative pectate lyase 8
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
bhw Bidens hawaiensis
Pathway
bhw00040
Pentose and glucuronate interconversions
bhw01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
bhw00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
143544576
Enzymes [BR:
bhw01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
143544576
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NCBI-GeneID:
143544576
NCBI-ProteinID:
XP_076892769
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Position
Unknown
AA seq
443 aa
AA seq
DB search
MAVFRCSLLLLISLIIAVIVTVSGEKSDTSNLSAVESEQFQSLNISSRYALAKESQTLNE
KAVQDPEEVVSMVEMSMRNSTERRKLGFFSCGTGNPIDDCWRCDPNWQKNRKRLADCGIG
FGRNAIGGRDGRFYVVTDSGDDDPVNPRPGTLRHAVIQDEPLWIVFKRDMVIQLKQELIM
NSFKTIDARGVNVHIANGACITIQFITNVIIHGLHIHDCKPTGNALVRSSPSHYGYRTMA
DGDAISIFGSSHIWVDHNSLSNCADGLVDAVMGSTAITISNNYFTHHNEVMLLGHSDSYT
RDKLMQVTIAYNHFGEGLIQRMPRCRHGYFHVVNNDYTHWEMYAIGGSANPTINSQGNRY
LAPTNPFAKEVTKRVDTDASQWHGWNWRSEGDLLLNGAYFTPSGAGASASYARASSLGAK
SSSMVATITSGAGVLVCRRGRQC
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgtttcggtgttcattgttgttgctaatttcgttaataattgcggtaattgtc
actgtttccggtgaaaaaagtgatacatcgaatctcagtgctgttgaatctgagcagttt
cagagtttgaatatttcctcaaggtatgctctagcaaaggaatctcaaactttgaatgaa
aaggcagttcaagaccctgaggaggtggtttccatggttgaaatgagcatgagaaacagt
actgaaagaagaaaattaggattcttctcgtgtgggaccggtaacccaattgacgattgt
tggcggtgtgacccaaactggcaaaaaaaccgtaaacgactcgctgactgcggtatcggg
tttgggcgtaacgccattggtggtcgtgacgggcggttctacgttgtcacagattccggt
gatgatgacccggtcaacccgagacccggcacactacgccacgctgtcatccaagacgaa
ccgctttggatcgtgttcaaacgtgacatggtcatccaacttaaacaagaacttattatg
aacagtttcaaaaccattgacgcccgtggcgtcaatgtccacatagctaacggcgcgtgt
atcaccatccagttcatcactaatgttattattcacgggttacatattcatgattgtaaa
ccgactggaaacgcgttggttagaagctctccgtctcattatgggtatagaacaatggcg
gatggggacgcaatttctatctttgggtctagtcatatttgggttgaccataattctctg
tctaactgcgcggatgggctcgttgatgcggttatgggttcgaccgcgatcacgatttcg
aacaattacttcacacatcataatgaggttatgttgttgggacatagtgactcttatact
agagataaactaatgcaagtgactattgcttataaccattttggagaagggctaatccaa
agaatgccaagatgtagacatggatatttccatgtggtgaacaatgactacacccactgg
gagatgtatgctattggtggaagtgcaaaccccaccatcaacagccaagggaacagatat
cttgcccctaccaatccctttgctaaggaggtaacaaagagggtagatacagatgcaagc
caatggcatggatggaattggagatcagaaggtgacttgcttcttaatggggcttatttc
acaccatctggtgcaggagcctcagcaagttatgcaagggcttcaagtttaggtgccaag
tcatcttccatggttgcaaccatcacttcgggtgctggcgtcctcgtttgccgccgtggc
cgccaatgctag
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