Bidens hawaiensis: 143545082
Help
Entry
143545082 CDS
T11418
Name
(RefSeq) pre-mRNA-processing protein 40A-like
KO
K12821
pre-mRNA-processing factor 40
Organism
bhw Bidens hawaiensis
Pathway
bhw03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bhw00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
143545082
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bhw03041
]
143545082
Spliceosome [BR:
bhw03041
]
Complex A
U1 snRNP components
U1 related factors
143545082
Complex B
143545082
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FF
FF_PRPF40A
WW
WW_TCERG1
Motif
Other DBs
NCBI-GeneID:
143545082
NCBI-ProteinID:
XP_076893144
LinkDB
All DBs
Position
Unknown
AA seq
950 aa
AA seq
DB search
MDNNNNNPQNPVSQSLRPPAIGFGTNYSMQFRAGVTPQPGQPFMQSGSAAQQYRAVGQTQ
LPGFSQLLQPRPGQPGLPSPSSQPMPMSYMQQPPQFPSQNAGVPLSSSYAFNAPSFGQPT
NVSSQFHAVSQMHTPVVSSGGQPWMSSGNQGQVTVSSVPQTGLQPSIAAPTNQRSGVVDA
SQESSSDWQEYPAADGRRYYYNKRTKQSSWEKPLELMTPLERADASTVWKEFTTAEGKKY
YYNKNTKQSKWTIPEELKLARELAEKEASRGIQSPATLTPSALDQASASASSVNEVSSSP
VAVTPLIPFGNAPSNLVSESSSIANPLIPAPGASTVSSPMGKLENSSSHGVPKASDGVSV
QDTEEAKKGMAVAAKVNTTPVEEKAVDDEQFLYASKQEAKMAFKALLEEANVKADWNWEQ
AMRVIINDKRYGALKAHGERKQAFNEYLMQRKKLEAEERRLKQRKAKEEFTKMLESKELT
SSMRWSKAMALFEDDERYKAVDRPADREDLFQNYLVDLQKKERAKAQEEQRQYRSEYRQF
LETCGLIKVDTQWRKVQDRLEDDERCSRLEKIDRLEIFQEYIRDLEKEEDEQRKIKKEHI
KRVERKNRDEFRKMLEEDVISGTITAKTQWRDYCQKVKESVAYQAVASNTSGSTPRDLFE
DAVEELEKKYHDDKTRVKDSLKSKKVAALPTWTFEDFKAVIEDDIISSLSDINLQLVFED
LVERAKEKEEKEAKKRQSLVKDFTDLLYEIKEITVSSSWDDSLQHFEESSEFRAIGDEAV
AREAFEEYIARLVEKAKEKERKREEEKARKEEKERRKEKERKEKEKDREERDREREERER
EKDKGKDRSKKADSDSENLDTITEHKEDKKRDRKHRKRHQDDTGSDKDERDDSRRSRRHG
SDRKKSRKHAYSPESDIESKHKKHKRDSRSKNGAHEELEDGEVGEDGEIQ
NT seq
2853 nt
NT seq
+upstream
nt +downstream
nt
atggataataataataataatcctcagaatcccgtttcacagtctcttcggccacctgcg
attggatttggaacaaattattcaatgcaattccgggctggggttacaccacaaccaggt
caaccattcatgcagtcaggttcagccgctcagcaatatcgtgcagtcggtcaaactcag
ctgccagggttttctcaactgttgcagccgaggccgggtcagcctggtctcccgtctcca
tcatcacaaccaatgccgatgtcgtatatgcagcagccgccacagttcccgagccagaat
gctggtgtacctctttcttcttcgtatgctttcaatgcaccgtcattcgggcaaccaaca
aatgtgtcttctcagtttcatgctgtctcacagatgcacacacctgttgtctcaagtgga
gggcaaccttggatgtcttctggaaatcaaggtcaggtaactgtttcatctgtgccacaa
actggactgcagccttcaattgccgctcccacaaatcagaggtcaggtgttgttgatgct
agtcaagagtcatcatctgattggcaagaatatcctgctgctgatggaagaagatattat
tacaacaagaggacaaaacagtcttcatgggagaagcctttggagttgatgacacctttg
gagagagctgatgcatctactgtctggaaagagttcacaactgcagagggcaaaaaatat
tattacaacaagaatacgaaacaatctaaatggacaataccagaggaactaaagctggca
cgtgagctggctgagaaagaagcttctagagggattcaatctccagcaactttaacacct
tctgcacttgatcaagcttcagcttcggccagctcagttaatgaggtgtcatcaagccct
gtagcagttacccctctcatcccttttggcaatgctccctctaatttggtgtctgagtca
tcatctattgcaaaccctcttattccagcacctggtgcttctacggtttcatctccaatg
ggaaaattagagaattcatcttctcatggtgttccaaaagcttcggatggagtttcagta
caggacacagaggaagcaaagaagggcatggcggttgctgcaaaagtcaacacaacaccg
gtagaagagaaagctgttgatgatgaacaatttttatatgccagtaagcaggaggcaaaa
atggcatttaaagctttacttgaggaggcaaatgttaaggctgattggaactgggagcag
gcaatgagagtgatcataaatgacaaaagatacggtgcattaaaagcacacggcgaacgg
aaacaggcgttcaatgagtatttgatgcaaagaaagaagttagaggctgaggagaggcgt
ttgaagcagagaaaagcaaaagaagagttcacaaagatgttggaatctaaggaactgaca
tcatccatgaggtggagcaaagcaatggctctatttgaagatgatgaacgctacaaggct
gttgaccgacctgctgaccgtgaagatctttttcaaaactacctcgttgacctacaaaag
aaggagagagcaaaggctcaagaagagcaaagacaatacagatcagagtacagacagttt
ttggaaacttgtggcttgattaaggtggatactcagtggcggaaagttcaggatcgtttg
gaggatgatgaaagatgctcacgtcttgaaaaaattgaccgcttggagattttccaggaa
tatatccgtgatttggagaaggaagaagatgaacaaaggaaaattaaaaaggaacatatt
aaaagggtggagcgtaaaaaccgtgatgagtttcgtaagatgctagaggaagatgttatt
tctggtacaattacagctaaaactcaatggcgtgactattgtcaaaaggtgaaggagtca
gtagcttatcaggcagttgcttcaaatacctctggctcaactccaagagatttgtttgag
gatgcagttgaggagttggagaaaaagtaccatgacgataaaaccagggtgaaagattct
ctgaaatcgaagaaggttgctgctttaccaacatggacatttgaagatttcaaggctgtt
atcgaggatgacatcatctcatctttatcagatattaatctgcagcttgtgtttgaagac
ttagttgagagggcaaaggagaaagaagagaaggaagctaaaaaacgtcagtctctcgtg
aaagatttcaccgatctactgtatgagatcaaggaaataactgtgtcttcttcatgggat
gactccctgcaacactttgaggaaagctccgagttcagagctattggtgacgaggccgtt
gctcgtgaagcctttgaggaatatattgctcgtttagtggagaaggcaaaagagaaagaa
cgcaaacgggaagaagagaaggcaagaaaggaggaaaaagagaggagaaaggagaaagaa
cgtaaagagaaagagaaagaccgagaggagagagatagagaaagagaggagagagagaga
gaaaaagacaaaggtaaagaccgatccaagaaagccgactcagatagtgagaatctagat
actattacagaacacaaagaggacaaaaaacgagacagaaaacatcgtaagcgccatcaa
gatgacacggggtctgacaaggatgaaagggatgactccaggcggtctcgccgccatggc
agcgaccgcaaaaagtctagaaagcatgcatattcacctgaatctgatattgaaagcaaa
cataagaaacataagagagattcgcgtagtaaaaatggcgctcacgaggagcttgaagat
ggggaagttggtgaagatggtgaaattcaatag
DBGET
integrated database retrieval system
