Bidens hawaiensis: 143545087
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Entry
143545087 CDS
T11418
Name
(RefSeq) transcription elongation factor SPT6-like
KO
K11292
transcription elongation factor SPT6
Organism
bhw Bidens hawaiensis
Brite
KEGG Orthology (KO) [BR:
bhw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bhw03021
]
143545087
03036 Chromosome and associated proteins [BR:
bhw03036
]
143545087
Transcription machinery [BR:
bhw03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
143545087
Chromosome and associated proteins [BR:
bhw03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
143545087
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH2_2
HHH_7
YqgF
SPT6_acidic
Spt6_S1
HTH_44
HHH_9
Tex_N
Tex_central_region
S1
EBNA2_Core
Motif
Other DBs
NCBI-GeneID:
143545087
NCBI-ProteinID:
XP_076893148
LinkDB
All DBs
Position
Unknown
AA seq
1537 aa
AA seq
DB search
MARKKRMSKREAEVDETIELEDIEDEDLDEFEDDGFIVNDDEDEDDVTVIGSGSQRKKKK
RSQKNFVVDDEDYELIEENTGIRRSKHESKFNRLKKARTNAGEGSSGYLDDLFGADDDSI
LDGSDEDDMTGFIVEDDVADEHGGPSRPLDRKKKSTQSAGASSNDLFGDLDEFSKVNKYD
ETSESKEAKVEDEFEPIMNSEKYMTKKDDQIKKTDVPERMQISEEITGPHSTFVMSIDRE
SNWIINQLKLAKGGSSTTEEGNEKELSTLKEDIKRFLKLVHVDNFDVPFIATYRKEECQS
LFKDQESDLENQYSSDEKPTLRWHKALWNILDLDRKWLLFQKRKSALQLYYNKRFDEDRD
IYDETRLHLDQKFFESIIKFLNMAETEREIDDVDAKFNLHFPPGEVVLNEGEFKRPKRRS
QYNICSEAGLREVAIKFGYSSEEFGLLISLEQMRDEPQNAVETPEDVASRFTCPTFDNPQ
AVLAGARHMAALEISNEPLVKKHVRDFFVENATVSTSPTAEGKLVIDTHHQFAGIKWLKD
KPLTKFDDAQWLLIQKAELDNLIQVSLKLSTTSHDKLISDANDYYLSTGTSESVLLWNEQ
RKQIIKDAFDGFLLPSMEKEARSLLTSRAKSWLQMEYGRLLRDKVSVAPYQKKGFDSPRV
MACCWGPGRPATTFVMLDAFGEVVDVLTAGSLSIRGQSVNDQQRKKNDQLRILKFMSDHK
PNVVILGAVSVPCSRLKEDIYEIVCKMDDVDGLSVVYGDESLPRLYENSEISSEQLHSRT
GIVKRAVALGRYLQNPLAMAATLCGPGKEVLSWKLSPLQSFLTSNEKFDVVEQVMVDITN
QVGLDVNLAISHEWLFAPLQFISGLGPTKAASLQRSLVRSGSIYSRKDLLNHNLGRTVFI
NVVGFLRVRRSGNAVSSSQLIDLLDDTRIHPESYCMAQELAKEIYRADVKDDVIIDDDDD
DDIIDIAVVHLRENPSLLKSLEVDTYVNSKKLENKKDTINLIKMELLHGFQDCRREYVEP
SQEEEFCMISGETNSSLSEGRIVQVTVRRVLPQRAICSLASGLSGMLYKEDFSDDCNDDD
DLTDKLKEGQTLTCKIKSVVKDRYQVSLSCKESHMKSNWSSEVDKPVDPYYKEVREILGS
GNDKPNKVKEIAKKLFKPRMIVHPHFKNVTIDDAIDLLSGKESGASILRPSSRGPSYLTL
TLKVYNGVYAHKDILEGEKDQKDISSLLRLGKTLKIGDDVFADLDAVITGYVDPLVANLK
KMLDYRMFKRGTKAEVDESLRKEKTEHPMRIVYSFGVSHEHPGAFILTYIRTSNAHHEYI
GLYPKGFRFRKQMFQEIDRLVAYFQKHIDDPREPVRPVSTGGWGGSDDQDGGGRGRGRGR
GRGRGRGRGRGRGDDSGNDNQDSGYGGGSSSWGGGASGGDSGGGGGGGWSGGGGGASGGD
DGGGGGWSAGASGGGGSSWSAGASGGGGSSWGKKTNDDASGSGDTKMDVDSGGWGAKKST
EAGDSGGWGAKKSTEAGDSGGWSGGWRWRWRKLGTEE
NT seq
4614 nt
NT seq
+upstream
nt +downstream
nt
atggcgaggaagaagagaatgtccaaacgagaagctgaagtcgatgagacgatagagctt
gaagatattgaagacgaagatctcgatgagtttgaggatgacggattcatagtgaatgat
gatgaagacgaagatgacgtgacagtcatcggtagtgggagccaaaggaagaaaaagaag
agatcacagaagaattttgttgttgatgatgaggattatgagcttattgaagaaaacact
ggcattcgtcgctcaaaacatgaaagtaagtttaatcggctgaagaaagcaagaactaat
gctggtgaaggatcctcagggtatcttgacgatttgtttggagcggatgatgattcaatt
ctagatggaagtgatgaagatgacatgactggctttattgtagaggatgatgtagcagat
gaacatggtggtccatcgaggcctcttgatcggaagaaaaagtcaacgcagtcagcagga
gcttcttctaatgacctatttggtgatcttgatgagttttcaaaagttaacaaatatgat
gaaaccagtgagtcaaaggaagcgaaagttgaagatgagtttgaaccaattatgaattca
gagaagtacatgaccaagaaagatgatcaaattaagaagacagacgttcctgaaagaatg
cagatatctgaggaaatcactggacctcattcgacatttgttatgagcatagacagagag
agtaactggattattaatcaacttaaattggccaaaggaggtagtagtacaactgaagaa
ggaaatgaaaaggagttatctacacttaaggaagacattaaaaggttcttgaagcttgtt
catgtggataatttcgatgtgccatttattgctacgtatagaaaggaggagtgccaaagc
ttgtttaaggatcaagagtctgatttggagaatcaatattcttctgatgaaaaaccaaca
ctgaggtggcacaaggcactttggaatatcttggatttagacagaaagtggttactcttt
caaaaaaggaaaagtgctctacaactgtactacaataagcggtttgatgaagacagagac
atatatgatgaaactcgccttcatttggatcagaaattttttgagtcaattatcaagttc
ttaaatatggctgaaacagaacgggaaatcgatgacgtggatgccaaatttaaccttcat
tttccacctggtgaagttgtactcaatgaaggggaattcaagaggcctaagagaagatca
cagtataacatttgcagtgaagctggccttcgggaggttgctataaagtttggttatagc
tctgaggaatttggattactgatttctcttgaacaaatgagagatgaaccacagaatgct
gttgaaacccctgaagatgtggcatcaaggtttacatgtccaacgtttgataacccgcaa
gctgtgcttgcaggtgctaggcacatggctgcacttgagattagcaatgagccgttggtg
aaaaaacatgttcgtgacttctttgtggaaaatgcaacagtatcaacaagtcccactgct
gaagggaagctagttatagacacccatcatcagtttgcaggaatcaaatggttaaaggac
aaaccactaacaaagtttgatgatgcacagtggcttctaatccagaaagccgagcttgat
aatctcatccaagtttctctaaagctttctacaacttcccatgataagttaattagtgat
gctaatgactattacctcagtactggcactagtgaatctgttttattatggaatgaacaa
cgaaagcagattataaaagatgcatttgatggtttccttctaccttctatggagaaagaa
gcaagatccttgttaacaagcagagcaaaaagttggctacaaatggaatatggaagattg
ctaagggataaagtgtcggttgcaccttatcagaagaagggatttgattcacctagggtt
atggcatgctgttggggcccgggtaggcctgcaacaacttttgtgatgctggatgctttt
ggtgaagttgttgatgtgttgactgctggctctttgagtatacgtggtcaaagtgttaac
gatcagcaacgcaagaagaatgatcagttacgaattttgaaattcatgtcagatcacaaa
cccaatgttgttattttgggagctgtgagtgtgccttgtagccggctgaaggaagatatt
tatgagatagtttgcaagatggatgacgtggatggcctaagtgttgtatacggggatgag
tctcttcctcgcttgtatgaaaattcagaaatatcatctgagcagcttcattctcgaact
ggcattgttaagcgtgctgttgctcttggacgatatcttcaaaatccattagcaatggct
gcaactctttgtgggcctgggaaggaggtattatcatggaaacttagtcctttacagagc
tttcttacatctaatgagaagtttgacgtagttgaacaagtaatggtagatatcactaac
caagtgggcctagatgtaaatttggctataagtcatgaatggttatttgcgcctctacaa
ttcatttctgggctgggacccacaaaagctgcttctttacaacgatctttagtgagatcc
ggttctatatactcgagaaaggacttgttgaaccataatcttggtaggacagtgttcata
aacgttgtcggtttcttacgtgttcggcgaagtggaaatgctgtcagcagtagccagttg
attgatttgttagatgatactaggatccacccggaatcatattgtatggcacaagagtta
gctaaagaaatatatcgtgctgatgtaaaagatgatgtcatcattgatgatgatgatgat
gatgacataattgatatagctgtggttcacttgagagagaatcctagcttgttaaagagt
ctggaggttgacacgtatgttaactctaagaaattggagaataaaaaagacacaataaat
cttataaagatggaattgttgcacggttttcaagactgtcgaagagaatatgtggaaccg
agtcaagaagaagagttttgcatgatttctggtgagacgaatagttcactttcagaaggg
aggattgtgcaggttacggttcgccgggtgctacctcagagggcaatctgtagtcttgca
tcagggttgagcgggatgctatacaaggaagattttagtgatgattgtaatgacgatgat
gatttgactgataagttaaaggaaggtcaaactttgacttgtaaaattaaatcagttgtg
aaagataggtaccaggtttctcttagctgtaaggaaagtcatatgaagagtaattggtct
tctgaggttgataaaccggtggatccttattataaagaagttcgggaaattttagggtct
ggaaatgacaagcctaataaagtgaaagagatagcaaagaaactttttaagccaagaatg
attgttcatcctcacttcaagaatgttacaattgatgatgcaatagatttactttctggg
aaagaatctggtgcgagtatcctccgtcctagttctcgtggaccctcatacttaactttg
acactcaaagtttacaatggggtatatgctcacaaggacattctagaaggtgaaaaagac
cagaaggatatttcaagcttgcttcgtcttgggaaaacattaaaaatcggggatgacgta
tttgctgatcttgatgcggtgattactggatatgtagatccattggtggctaatctgaag
aaaatgttggattacagaatgtttaagcgtgggacaaaagctgaagttgatgagagttta
aggaaggaaaaaactgaacacccaatgagaattgtgtattcttttggtgtgtcccatgaa
cacccaggagcgtttatcttaacatacataaggacttcaaatgcacatcatgagtatatt
gggttgtatccaaaagggttcagattcaggaaacagatgtttcaggaaattgatagatta
gttgcttatttccaaaaacacatcgatgatccccgtgaaccggtccgtcctgtatcaact
ggtggttggggtggctctgacgatcaagacggtggtgggcgaggacggggaagaggtcgt
gggcggggaagaggaagagggcgtggacggggaagaggagatgactctggaaatgataac
caggattcgggttatggaggtggcagtagtagttggggtggcggtgcaagtgggggtgac
agtggcggtggcggtggtggtggttggagtgggggaggcggtggtgcaagtggaggtgac
gatggcggcggtggtggttggagcgcgggtgcaagtggcggaggtggtagtagttggagc
gcgggtgcaagtggcggaggtggtagtagttggggtaagaaaaccaacgatgatgcttct
ggttcaggtgacacgaagatggatgtggatagtggtggatggggtgcaaagaagagtact
gaagcaggggacagtggtggatggggtgcaaagaagagtactgaagcaggggacagtggt
ggatggtctggcgggtggcggtggcggtggcggaagttggggacagaagagtag
DBGET
integrated database retrieval system
