Bidens hawaiensis: 143545275
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Entry
143545275 CDS
T11418
Name
(RefSeq) ATP-dependent helicase BRM-like
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
bhw Bidens hawaiensis
Pathway
bhw03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
bhw00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
143545275
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bhw03021
]
143545275
03036 Chromosome and associated proteins [BR:
bhw03036
]
143545275
Transcription machinery [BR:
bhw03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
143545275
Chromosome and associated proteins [BR:
bhw03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
143545275
Chromatin remodeling factors
BAF complex
143545275
PBAF complex
143545275
GBAF(ncBAF) complex
143545275
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
QLQ
AAA_14
HDA2-3
DUF2996
Motif
Other DBs
NCBI-GeneID:
143545275
NCBI-ProteinID:
XP_076893307
LinkDB
All DBs
Position
Unknown
AA seq
2004 aa
AA seq
DB search
MQSGGGHGRSIGPGPPSASASPSSSSSAVSAPNLGFDPMQQRQTLQQQLLRNPEAREAML
AYQSGNMQGVMGGNIAQMQGQNRNPGFDQNMANPVHQAYSQYAFQDQQKSGLGMQPQQVR
MGTVVPSSKDPKMQDSDQGQGQSQGQNQKQFVTPTSLGQLMQGNNNIRPMSAPQAPQNMT
MAAQLQAMQALALERNIDLRLPQNSHLVAQLIPLMQARMQKANETKMTNDNSPRGNSSTD
AGSIKPRPNIPPGHLGSTSSPLLVNSSGPGQVGQSQVQGPDHGQQLPPRQPAPVSSGVPS
MHQPQPSMNTSQGSMQQMNRPSSQQKLPSAFTKQQLHVLKAQILAFRRIKKGEKTLPNEL
IQAIAPPPLDAQIQPSTANAGPVNVKSQSQPDDQMRRLESNDKDLQAAAFTSGMNSIKRE
GPEETAATVNAQGTTSTQKETPPVLPAKQEQEVELGVQKTSNVNDRPTDKGKSVVSESVT
VPENVQNVQSKRPLQGGNPPQTKDPGPKKYHGPLFDFPFFTRKHDAFGSSMMINNNNNLA
LAYDLKDLIADEGVEVINKKRKENIEKINTLLAVNLERRRIRPDLVLRLQIEEKKLKLHD
LQKRVRDEVDQQQQDIMAMPDRPYRKFIRLCERQRMDLNRQVQAAQRAVRDKQLKQIFQW
RKKLLECHWAIRDARTQRNRGVAKYHEKMLREFSKRKDDDRSKRMEALKNNDVERYREIL
LEQQTSMPAEAAERYEVLSSFLSQTEEYLQKLGGKITAAKNQQEVEEAANAAAAAARAQG
LSEEEVRAAASCAREEVMIRNRFSEMNAPQDSSSVSKYYTLAHAVNERVIRQPSMLRCGT
LRDYQLVGLQWMLSLYNNKLNGILADEMGLGKTVQVMALIAYLMEFKSNYGPHLIIVPNA
VLVNWKSELHNWLPNVSCIYYVGNKDQRTKLFSQEVCHMKFNVLVTTYEFIMYDRSKLSR
IDWKYIVIDEAQRMKDRESVLARALDRYRCQRRLLLTGTPLQNDLKELWSLLNLLLPEVF
DNRKAFHDWFSKPFAKEVAQSGEDDWLETEKKVIIIHRLHQILEPFMLRRRVEDVEGSLP
PKISIILRCKMSAFQGAVYDWIKSTGTIRVDPEDEKRKAEKNPMHQIKTYKPLNNKCMEL
RKTCNHPLLNYPYFNDISKDFLVRSCGKLWILDRILVKLQCTGHRVLLFSTMTKLLDILE
EYLQWRRLVYRRIDGTTSLEDRESAIVDFNSPDTDCFIFLLSIRAAGRGLNLQTADTVII
YDPDPNPKNEEQAVARAHRIGQTREVKVIYMEAVVDKISSHEKEDNFKNGGRVDSDDDMA
GKDRYIGSIESLIRNNIQQYKIDMADEVINAGRFDQRTTHEERRSTLESLLRDEERYQET
VHDVPSLQEVNRMIARSEEEVELFDQMDEEFDWADEMTRYDQVPKWLRAGTREVNATVAR
LSKKPPKHMIFNETIDNLVTDRRRGRSKDKKFPNYAELDDDIEEFSEATSEEAEAAEEDE
TGDANETPGTDKAQSEDEIPVSNNRYEYTRGPGAINLKEEGSSGSSSGSRKLMPVATPSI
SSQKFGSLSALESRPGSRSRRRHDELEDGEIAFSGNSHQEIKQSSSGTHDHDEVEDEQVL
QPKIKRKRSIRLRPKPEKPNLVHSGPSHVPYQPDRKKINVKTEPEQKVVIDQTHSSHTTK
KTPPPKKNSNKANVDVVTRPTRGNPIPAPAKVTPDQGGAKMSEAIQRRCKNVITKIQRRI
EKEGQQIIPLLTDLWKRKESHGNNNILDLHKIELRVDRLDYNTVPDLIVDVQAMLKGGMQ
YFGFSHEVRSEARKVHDLFFDILKIAFPDTDFREARSALTFTSSVAASASASGSSPRVTP
APSLGQPKRQKQVLEVDTPPSRSSHPRGSGPTSQRETRFGSNNAREPTDSQDDPHPGELV
ICKKKRKDREKSVVKPGTGTSVGREIKSPGQTRLSQSQQGWSNNNNNNNNQSPQQGSGSG
GGMGWANPVKKLRTEAGKRRPSHM
NT seq
6015 nt
NT seq
+upstream
nt +downstream
nt
atgcagtccggtggcggccatgggcggagtatcggtccgggaccgccgtccgcatccgca
tcgccttcgtcttcgtcgtcggctgtttcggctcccaatttggggtttgatccaatgcag
cagagacagactttacaacagcaattacttagaaaccctgaagcaagagaagccatgtta
gcttatcaatctggaaatatgcaaggagtcatgggaggtaatattgcccaaatgcagggg
caaaaccggaatccgggttttgatcaaaacatggcgaaccccgttcatcaggcttactct
caatatgctttccaagaccaacagaaatcgggcctaggaatgcagcctcaacaagtaaga
atgggaacagtggttccttcttcaaaagatccaaaaatgcaagattctgatcaaggtcaa
ggtcaaagtcaaggtcaaaaccagaaacagtttgtcacgccgacatcacttggtcaatta
atgcagggtaataataacatacggcctatgtcggccccacaagctcctcaaaacatgaca
atggcagctcaactgcaggccatgcaagctttggctcttgaacgcaacatcgatttaaga
cttccgcaaaattctcatttggttgcacaattaatcccgcttatgcaagcgagaatgcag
aaggcaaacgaaaccaagatgacaaatgataattctccaagggggaactcatcaactgat
gcggggtccatcaaaccacgtccaaatatccccccaggccatcttggttcaacttcaagc
ccattgttagtcaatagttctggtcctggtcaagttggtcaaagtcaggttcagggtccg
gatcatggtcaacagcttccacctaggcagcctgctccagtcagcagtggggtgccatca
atgcatcaaccacagccatcaatgaacacgagtcagggttccatgcagcagatgaatcga
ccttcttcacaacaaaagttaccttcggcttttacaaaacaacaactgcatgttcttaaa
gcacaaattttagcttttagacgtataaagaaaggggaaaaaacactaccgaatgaacta
atccaagctattgccccgccgccacttgacgcacaaattcaaccgtcaactgctaatgct
ggacctgttaatgtgaaaagtcaaagtcaacctgatgaccaaatgagacgattggagtcc
aatgataaagatcttcaagctgcagcctttacaagtggaatgaacagtataaaaagagaa
gggcccgaggagacggcagcaacagttaatgcacaaggtacaacatcaacacagaaggaa
accccacctgttcttcctgctaaacaagaacaagaagtcgaacttggggttcaaaaaact
tctaatgttaacgaccgtccaactgacaagggcaaatcggtcgtttcagaatctgttact
gtccccgaaaatgttcaaaatgttcagtctaaaagacctttacaaggtggaaatccacct
cagacgaaagatcccggcccgaaaaagtaccatggcccgttgtttgacttcccattcttt
acccgaaagcatgatgctttcgggtcaagcatgatgatcaataacaacaacaatcttgca
ctcgcatatgacttgaaagatctaatcgccgatgagggcgtggaagtaattaacaaaaaa
cgaaaggaaaacatcgaaaagatcaacactttactagctgtaaatcttgaaagaagaaga
ataagacctgatcttgttctaagattacaaattgaagaaaaaaaattaaaacttcatgat
ttacaaaaacgagtcagagatgaagttgatcaacaacaacaagatataatggcaatgcct
gataggccgtataggaagtttattcggttatgtgaacgccaaaggatggatctcaacagg
caagtacaagctgctcaaagggcggttcgtgataaacaactgaaacagatatttcagtgg
cgtaagaagcttctagaatgtcattgggccattagggatgcaaggactcaaaggaataga
ggtgttgctaaatatcatgaaaagatgttgagggaattttcaaagaggaaagatgatgat
aggagtaaaagaatggaagctttgaagaataatgatgtggaaagatatagagagatactg
ttagaacaacaaactagtatgccagctgaagctgctgaaagatatgaggttctttcttca
tttttatcacaaacggaagagtatcttcaaaaacttggaggtaaaataactgctgcaaag
aaccaacaggaagttgaagaggctgctaatgctgcagctgctgctgcacgcgctcagggt
ctatccgaagaagaagtgagagctgcagcttcttgtgcgagagaagaagttatgataaga
aatcgtttctctgaaatgaatgcgcctcaagacagctcatctgttagcaagtattatact
cttgcacatgctgtgaatgaaagggtcataaggcaaccctcaatgttaagatgtggaact
ttacgagattatcaacttgttggcttacaatggatgctttcattgtacaataataaatta
aatggaatattagctgatgaaatgggtcttgggaaaaccgtgcaggttatggcattgatt
gcttatttgatggagtttaaaagcaattacggtccacatcttatcattgttccaaatgcc
gttttggtgaattggaagagtgagttacataattggttgccgaatgtatcatgtatttac
tatgtcggtaacaaggatcaacggaccaagttgttctctcaagaggtctgtcacatgaaa
ttcaatgttcttgtcacaacctatgaatttattatgtatgaccgttcaaagctttcaaga
atcgattggaaatacattgttattgatgaagcacaaagaatgaaggaccgggaatcggtt
ttagctcgtgctcttgacagataccgttgtcaaagacgcctgctccttactgggaccccc
ttgcagaatgatctgaaggaactttggtcgttgttaaacttactacttcctgaagtattt
gataatcgaaaagcttttcatgattggttctcaaaaccatttgcaaaagaagtggcccaa
agtggtgaagatgattggttagaaactgagaaaaaagttattatcatacaccgacttcat
caaattttggaaccttttatgctcagacgtcgtgtggaagatgttgaaggttcacttcct
ccaaagatttccatcattttgcgttgtaaaatgtcagcatttcagggtgctgtatacgat
tggatcaaatccacgggtactattcgggttgaccctgaagatgagaagcgtaaggctgag
aagaacccgatgcaccaaattaaaacatataaaccgctaaataacaaatgtatggaactt
agaaaaacgtgcaatcatccattgcttaattacccatatttcaatgatatttctaaagac
tttcttgttcggtcatgtggaaagttatggattcttgatagaattttggtcaaacttcaa
tgcactggtcatcgggtccttcttttcagtacaatgacaaaacttttggatattttagaa
gaatatctacagtggcgaagacttgtttacagaagaattgacggtacaacaagtttagaa
gaccgtgaatcagctatagttgactttaacagtcccgacaccgattgctttatcttcttg
cttagcattcgggctgcaggacggggtctgaatcttcaaacagccgacacagttatcatt
tatgaccctgaccccaacccgaaaaatgaagagcaagcggtggctcgggctcaccgaatt
ggtcaaacacgagaagtcaaagtcatatacatggaagcagtggttgataaaatttcaagc
catgaaaaagaggataattttaagaatggtggtcgggttgattctgatgatgatatggcg
ggaaaagaccgttatattggatctattgagagcttaattaggaataatattcaacaatat
aaaattgatatggcggatgaggttattaatgctgggaggtttgatcaaagaacaacacat
gaagaaaggcgttcaactttggagtcattgttacgtgatgaagaaaggtaccaagaaacc
gttcacgatgtgccatcattacaagaggttaaccgaatgatagctagaagtgaagaagaa
gtcgagctctttgaccaaatggatgaagagtttgactgggccgacgaaatgactcgatac
gatcaagttcccaagtggcttcgggccggtactcgtgaagtaaacgcaaccgtggcccgt
ttatccaaaaaaccgccgaaacatatgatatttaacgaaaccatcgacaaccttgttact
gacagaagaagggggcgttctaaagacaagaagtttccaaattatgctgagctggatgat
gatattgaggaattttctgaagctacatctgaagaagctgaagcagctgaagaagatgaa
acgggtgatgctaatgaaacaccgggaaccgataaggcccaatcagaagacgagattccg
gtttctaataatcggtatgaatacactcgtgggcctggtgctataaaccttaaagaagag
ggttcttcgggttcgtcatcaggtagtcgaaaattgatgccggttgcaaccccctctatt
tcttctcagaaattcgggtcactttctgcactcgagtctagacctggttctcgttcaaga
aggcggcatgatgagctagaagatggggagattgcattttctggaaattcgcatcaggaa
atcaagcaatcgagtagtgggacccatgatcacgatgaagttgaagacgagcaggtttta
caaccgaaaataaaacgcaaacgaagcattcgtcttagaccaaaaccagaaaaaccaaat
ctcgtacatagtggtccttctcatgtaccataccaacccgaccgtaaaaaaataaatgtg
aaaaccgaacccgaacaaaaagtggttattgatcaaacgcattcttcacacacgaccaaa
aaaacaccgccacctaagaaaaactcaaataaggcgaatgttgatgttgtaacgagacca
accagaggaaatcctatacctgcccctgcaaaagttacccctgatcaaggtggggccaag
atgtctgaggccatccaaagaaggtgcaagaatgtaataaccaagattcaaaggagaatt
gaaaaagaagggcaacaaattattccattgctaaccgatctatggaagagaaaagaaagt
catggaaataataatattcttgatttgcataaaattgaacttcgtgttgaccgactcgac
tacaatacagttccagacttgattgttgatgtgcaggctatgttgaaaggcggaatgcag
tattttggattctcacacgaggtgaggtctgaagctagaaaagtccatgacttatttttc
gatatcttaaaaatagcgtttcccgacaccgactttcgagaggcgagaagcgcactcact
tttaccagctcagtggctgcttcagcatcagcatcgggctcgtctccaagagtcacaccg
gccccatctttaggtcaacccaagcgacagaaacaggtactcgaggtggacactcctcca
tctaggtcatcacacccacgtgggtcgggtcccacaagccaaagagaaacgcggttcggg
agtaacaatgcacgtgagccaactgactcgcaagatgacccccatccgggtgagcttgta
atttgcaagaagaaacggaaagatagggagaaatcagtggtgaaaccagggacagggact
agtgttggtcgggaaatcaaaagcccgggtcaaactcggttgagtcaaagtcaacaaggg
tggtctaataataataacaataataataatcagtctccccagcaaggaagcgggagtgga
ggtggaatgggctgggctaacccggttaaaaagttgcgaacggaagcagggaagagacgg
ccgagtcatatgtaa
DBGET
integrated database retrieval system