Bidens hawaiensis: 143546648
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Entry
143546648 CDS
T11418
Name
(RefSeq) vacuolar protein sorting-associated protein 35B-like isoform X1
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
bhw Bidens hawaiensis
Pathway
bhw04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
bhw00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
143546648
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bhw04131
]
143546648
Membrane trafficking [BR:
bhw04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
143546648
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps35
Motif
Other DBs
NCBI-GeneID:
143546648
NCBI-ProteinID:
XP_076894388
LinkDB
All DBs
Position
Unknown
AA seq
804 aa
AA seq
DB search
MNCHNHNQSVGSKMMISDAMEDEDKWLAEGIAGIQHNAFYMHRALDANNLREALKYSAQL
LSELRTSRLSPHKYYELYMRAFDELRKLEMFFKEEERHGCSVMDLYELVQHAGNILPRLY
LLCTVGSVYIKSKEAPAKDVLKDLVEMCRGVQHPIRGLFLRSYLAQISRDKLPDIGSEYE
GDGDTVMDAVEFVLQNFSEMNKLWVRMEHQGPARVRDKMEKERNELRDLVGKNLHVLSQI
EGIDLDLYKETVLPRILEQVVNCKDELAQYYLMDCLIQVFPDEYHLQTLETLLGACPQLQ
PTVDIKTVLSQLMERLSSYAASSPEVLPEFLQVEAFAKLSSAIGKVIETQGDMPIVGAIT
LYVSLLTFTLRVHPDRLDYVDQVLGSCVKILSNKPKLEDSRATKQVVALLSAPLEKYSDI
VTSLTLSNYPRVMDHLDAGTNKIMAMVIIQSIMTNQACVSSADKVEVLFELIKGLIKDLE
GDSDDEFDEEDFNEEQNSVARVIHVLYNDDPEEMLKIICTVRKHIMTGGPKRLPFTVPPL
VFSALKLIRRLQNQDGDVTGEEDPATPKKIFQLLNQTIEALSYVPAPELALRLYLQCAEA
ANDCDLEPVAYEFFTQAFVLYEEEIADSKAQVTAIHLIIGTLQRTSVFGVENRDTLTHKA
TGYSAKLLKKPDQCRAVYACSHLFWVDDQDGIKDGERVLLCLKRALRIANAAQQMANVTR
GSSGPVTLFVEILNKYLYYFENGNPQITSGAIQGLIELIKTEMQSDTATPDHISDAFFAC
TLRYIQFQKQKGGAMGEKFDTIKV
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
atgaactgtcacaatcacaatcagagtgttggatcgaagatgatgatatcagacgccatg
gaagacgaagataaatggctggcagaaggcatcgccggaattcaacacaacgccttctac
atgcatcgcgctttggatgctaataatctcagagaagccctaaaatactctgcacagttg
ttgtctgagcttcgaacttcgcgattatcgcctcataaatactacgagctctatatgaga
gcattcgatgagttgagaaagttggaaatgttctttaaggaagaagaaaggcatggttgt
tcggtgatggacttgtatgaacttgtccaacatgctggaaacatattaccaagattgtat
ctactatgtacagtagggtctgtttacataaagtcaaaggaggctcctgcaaaggatgtt
cttaaagaccttgttgaaatgtgtcggggggtccagcatcccatacgtggactgtttctt
aggagttatcttgcacaaattagtagggataagctcccagatattggttctgaatatgaa
ggagatggtgatactgtcatggatgctgtagagtttgtgctgcaaaatttttcggaaatg
aataaactttgggttcggatggagcatcagggacccgctagggtgcgagacaaaatggaa
aaggagaggaacgagctgcgtgatcttgttggtaaaaatcttcatgttcttagtcagatc
gagggtattgaccttgatttgtacaaagaaacagttcttcccagaatcttggagcaggtg
gtcaactgtaaggatgagctggcacaatattatctaatggactgcctgattcaggtgttt
ccagatgagtatcacttacagactcttgaaacccttttaggagcttgtcctcaactccag
cctacagttgatatcaagacagtactatctcaacttatggagagactatcaagttatgct
gcttctagtccagaagtgctaccagaattcctccaagtagaagcatttgctaaattaagc
agtgctattggcaaggttattgaaacacagggtgacatgccaatcgttggggccattact
ttgtatgtttctcttctcacattcacgcttcgtgttcatcctgatcggcttgattatgtg
gatcaagtgctgggatcatgcgtgaagatactttctaacaaaccaaagcttgaagatagt
agagctacaaaacaagttgttgcacttttaagtgcacctttggaaaaatatagtgatatt
gtcacttctttgacattatctaattatccacgtgtcatggatcaccttgatgccggaacc
aataagataatggctatggttattatccaaagtataatgacaaatcaagcttgtgtatct
tctgctgacaaggttgaggttctttttgagttaattaaagggcttatcaaggatttggag
ggagattcagacgatgagtttgacgaggaggattttaatgaagaacaaaattctgttgct
cgtgttatacatgtgctctataatgatgacccggaggagatgttgaagattatttgtact
gtgcggaagcatatcatgactggaggcccaaaacgtcttccttttacagttcctcctctt
gtattctctgctttgaagcttattcgccgattgcaaaatcaagatggagatgtaactggt
gaagaggatccagcaacgcctaagaaaatattccagcttttaaatcagacgattgaggca
ctttcatatgttccagcccctgaattggcattgaggctgtacttacagtgtgcagaggct
gccaatgactgtgatctggaaccagttgcttatgaatttttcactcaagcatttgtttta
tacgaggaagaaattgcggattccaaagcccaggtgactgcaattcacctaataatcgga
acccttcaaagaacaagtgtttttggtgtggagaacagagataccttgacacataaagcc
actgggtattcagctaaacttctgaaaaagcccgatcaatgcagagcggtttatgcgtgt
tcacacttgttttgggtggatgatcaagatggtataaaggatggagaaagggtccttctt
tgccttaaacgtgcattaaggattgcaaatgccgcacaacaaatggcaaatgttactcgt
ggtagtagtgggccagttactctctttgttgaaatactcaacaagtacctgtattacttt
gaaaacggcaatccacagatcacaagtggtgcaatccaggggctgatagagcttatcaaa
accgagatgcaaagtgacactgccacacctgatcatatctcggatgcgttctttgcttgt
accttaaggtacatacagttccagaaacagaaaggtggagcaatgggtgagaagtttgat
accatcaaggtgtga
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