Bidens hawaiensis: 143547591
Help
Entry
143547591 CDS
T11418
Name
(RefSeq) putative polygalacturonase At3g15720
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
bhw Bidens hawaiensis
Pathway
bhw00040
Pentose and glucuronate interconversions
bhw01100
Metabolic pathways
Module
bhw_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
bhw00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
143547591
Enzymes [BR:
bhw01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
143547591
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Motif
Other DBs
NCBI-GeneID:
143547591
NCBI-ProteinID:
XP_076895094
LinkDB
All DBs
Position
Unknown
AA seq
401 aa
AA seq
DB search
MEQRTILLIVSLVYFLQQSSAAGYNIMQFGAKGDGHTDDTLAFERAWQVVCHDVGPSSKL
TIPKPNTFLVSPISFQGPCKASRVHLEILGTIIAPLDPRSWNGCETGAWMYFYGVSGLVI
DGGGTINGRGNAWWTKKSSIYIQEESNCDTPPTAMHFQSCNGLQLRNLRHLDSPRNHIGL
SQCSYSTLSYLYIAAPANSANTDGIDISHSTQVRVRNSVIRTGDDCIALNSETSQINING
IFCGPGHGISIGSLGGNGEYDTVEGIKVQNCTFSGTTNGARIKTWQGGSGYARDITFENI
ILHNVENPIIIDQFYCPNKHDCPKKPSALKVSDISYKSFFGTSSSRNALNFDCSDNVPCL
GILLDQVNIRSSAQGEDTTAYCNNAYGTSSFSRPAASCLLN
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atggagcaaaggacaatattgcttattgtctcgttggtttactttctacaacaaagttca
gccgctggttacaacataatgcaatttggtgccaagggtgacggtcatactgacgataca
ctggcgtttgaaagagcttggcaagtggtctgtcatgatgttggtccgagttcaaagttg
accataccaaagcccaacacctttttagtgagcccaattagctttcaaggcccatgcaaa
gcttcccgagtccatttggagatactaggaactatcatcgctcccctagaccctagatcg
tggaatggttgtgagactggagcatggatgtatttttacggtgtcagtggcttagttatt
gacggtggtggcacgatcaatggtcgtggcaacgcttggtggactaaaaaatcttcaata
tatatacaagaagaatccaattgtgacacaccaccaacggcaatgcactttcaaagttgc
aatgggcttcaactaagaaaccttcgtcatctagatagcccgagaaaccatatcggtctt
tcgcaatgcagttattcaactctttcatacttatacatagctgcacccgcgaatagtgct
aacactgatggcatcgatatatcacattcaacccaagtacgagttagaaattcagtcatc
agaaccggcgacgattgtatagctctaaacagcgaaacctctcaaatcaatattaatggc
atattttgtggcccaggacatggtataagtatcggaagtttgggaggaaatggcgaatac
gatacggtagaaggtattaaagtacaaaattgcacgttttctggaacaacaaatggagct
agaatcaaaacatggcagggtggctcgggatatgctagagatatcacattcgagaatata
attcttcacaacgttgaaaaccctattattatcgatcaattttattgtccaaataaacac
gattgtcctaaaaagccatctgcgttgaaagtcagcgacataagttacaaatcattcttt
ggaacatcatcatctcgaaacgcgttaaattttgattgcagtgacaacgtgccatgcttg
ggcattttattggatcaggtgaacataagatcgagtgcccaaggagaagatacaactgcc
tattgcaacaatgcttacgggacgagttctttctcaaggccggccgcatcgtgtttattg
aactaa
DBGET
integrated database retrieval system
