KEGG   Bidens hawaiensis: 143549006
Entry
143549006         CDS       T11418                                 
Name
(RefSeq) histone deacetylase 9-like
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
bhw  Bidens hawaiensis
Pathway
bhw03082  ATP-dependent chromatin remodeling
bhw03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:bhw00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    143549006
   03083 Polycomb repressive complex
    143549006
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:bhw03036]
    143549006
Enzymes [BR:bhw01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     143549006
Chromosome and associated proteins [BR:bhw03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     143549006
   HDAC complexes
    Sin3A-HDAC complex
     143549006
    BRAF-HDAC complex
     143549006
    REST complex
     143549006
    SHIP complex
     143549006
    MiDAC complex
     143549006
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     143549006
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    143549006
  Chromatin remodeling factors
   NuRD complex
    143549006
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 143549006
NCBI-ProteinID: XP_076896141
LinkDB
Position
Unknown
AA seq 430 aa
MRSKDRISYFYDGDVGNVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVEL
AQFHSADYVEFLQRINPDTQHLFPEEMAKFKLGEDCPVFDDMFEFCQIYAGGTIDAARRL
NNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVE
EAFYFTDRVMTVSFHKYGNLFFPGSGDVKEIGEQEGKFYAINVPLKDGIDDTSFTRLFKT
IISKVVETYQPGVIVLQCGADSLAGDRLGCFNLSIDGHAECVRIVKRFGLPLLVTGGGGY
TKENVARCWTVETGVLLDTVLPDEIPDNDYIKYFAPECSLRIPTAHIENFNSKSYLGTIK
MQVLENLRCIQHAPSVQMQEVPPDFYIPDFDEDEKNPDERIHQHTRDKHIQRDDEYYEGD
NDNDHNMDDV
NT seq 1293 nt   +upstreamnt  +downstreamnt
atgcgttcaaaagaccgaatttcatacttttacgatggagatgttggcaatgtttacttt
gggccgaaccatccaatgaagccgcaccggttatgcatgactcatcatttggtgctctcg
tacgatcttcacaaaaagatggaaatttataggcctcacaaggcatatccagttgagcta
gcgcagtttcactcagctgattatgtggagttcctgcagcggattaaccccgacacgcaa
catttgtttccagaagaaatggcaaagtttaaacttggggaagattgccctgtttttgat
gacatgtttgaattttgccaaatatatgctggtggaacaattgatgctgcacgaagatta
aataatcagctttgtgacattgccataaattgggctggtggattgcatcatgctaaaaag
tgtgaggcgtctggattttgttacattaatgatttggttttgggcattttggagcttcta
aagtatcatgcacgagttttgtatattgatattgatgtgcatcatggtgatggtgtagaa
gaagccttttacttcaccgacagggtgatgacagttagttttcacaaatatggaaatctg
ttctttcctggatcaggtgatgttaaggaaattggggaacaagaaggaaagttttatgca
attaacgtccctttgaaggacggcatagacgacaccagctttacacgattgtttaaaaca
ataatatcaaaggttgttgaaacataccaaccgggtgtaatagttcttcaatgtggggcc
gattctcttgctggggaccgcttaggctgtttcaatctctctatagatgggcatgctgaa
tgtgttagaattgtaaaaagatttggtttgcccctgctggtaactggtggtggaggatat
acaaaagagaacgttgctcggtgttggactgttgaaacgggagttcttttagatacagtg
cttcctgatgagattccagataatgattatatcaagtattttgctccagagtgttcgtta
aggattccaacagctcatattgaaaattttaatagcaagtcatacttgggcactataaag
atgcaagttctagaaaatcttcgatgcattcaacatgctccaagtgtgcagatgcaagag
gtcccacctgatttctatatccctgattttgatgaagatgagaagaaccctgatgaacga
atccatcagcacacgagggacaagcatattcaacgtgatgatgaatactatgaaggagac
aacgacaacgatcataacatggatgatgtttga

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