Bidens hawaiensis: 143550260
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Entry
143550260 CDS
T11418
Name
(RefSeq) ruBisCO large subunit-binding protein subunit beta, chloroplastic-like
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
bhw Bidens hawaiensis
Pathway
bhw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bhw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
143550260
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bhw03019
]
143550260
03110 Chaperones and folding catalysts [BR:
bhw03110
]
143550260
03029 Mitochondrial biogenesis [BR:
bhw03029
]
143550260
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bhw04147
]
143550260
Enzymes [BR:
bhw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
143550260
Messenger RNA biogenesis [BR:
bhw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
143550260
Chaperones and folding catalysts [BR:
bhw03110
]
Heat shock proteins
HSP60 / Chaperonin
143550260
Mitochondrial biogenesis [BR:
bhw03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
143550260
Exosome [BR:
bhw04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
143550260
Exosomal proteins of other body fluids (saliva and urine)
143550260
Exosomal proteins of breast cancer cells
143550260
Exosomal proteins of colorectal cancer cells
143550260
Exosomal proteins of bladder cancer cells
143550260
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
143550260
NCBI-ProteinID:
XP_076897059
LinkDB
All DBs
Position
Unknown
AA seq
599 aa
AA seq
DB search
MASTFAGITAVGSLPSSASSNKLSSFASISASPIGRRPNLTLRRAPQTSQIKAAAKQLYF
NKDGSAIKKLQIGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVDLEDPV
ENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLITEGVKVVAAGANPVLVTRGIEKTTKA
LVAELKSISKEVEDSELADVAAVSAGNNYEVGNMIAEAMSKVGRQGVVTLEEGKSAENSL
YVVEGMQFDRGYISPYFVTDSEKMVAEYENCKLLLVDKKVTNARDLISVLEDAIKNGYPI
LIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGL
TLDKADSSVLGHAAKVVLGKDYTTIVGDGSSQEAVEKRVAQIRNLIEVAEQDYEKEKLNE
RIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVQEGIVVGGGCTLLRLASKVD
SIKETLDNDEEKVGADIVKRALSYPLKLIAKNAGVNGSVVSEKVLATDNARFGYNAATDT
YEDLMSAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPVPVGNPMDNSGYGY
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atggcttcaacttttgctggtatcacagccgttggatcattaccttcttcggcttcatca
aacaagttatcatcttttgcttcaatatctgcaagtccgattggcaggagaccgaatctt
accctccgaagggccccacaaacttcccaaattaaagctgctgcaaagcagttgtacttt
aacaaagacgggtcggccataaagaagctgcaaattggtgttaacaaactcgcggatcta
gttggtgttactcttgggcccaagggcagaaatgtggttctagaaagcaagtatggtgcc
cccaaaattgtgaatgatggtgttacggttgccaaagaggttgacttggaagacccggtg
gagaatattggtgcaaaattggttagacaagccgccgccaagaccaatgacttggctgga
gacggaaccacaacatctgttgtccttgcacaaggtcttatcactgaaggtgtcaaggtt
gttgcagctggtgcaaatccggttcttgttacccgaggcattgagaagacgactaaagct
ttggtcgctgagctcaagtcgatctccaaagaggtggaagacagtgagctagcagatgtg
gctgcggttagcgccgggaacaactatgaggtaggaaacatgatagccgaagccatgagt
aaagtcggtcgtcagggcgtggtgactcttgaagagggcaaaagtgctgaaaacagtctt
tatgttgttgaaggcatgcaatttgaccgcggttacatctcaccatattttgtaactgac
agtgagaaaatggttgctgagtatgagaactgcaagttgttattggttgataagaaagta
acaaatgcgagagatcttattagtgtgttggaagatgctatcaagaatggttaccctata
ttaataattgccgaggatattgaacaagaggctttagcgactcttgttgtgaacaaactt
agaggggcgttaaagatagctgcactgaaagctcctggtttcggagagaggaaaagccag
tatcttgatgatattgctatcttgactggaggaactgttattagagacgaagtgggactc
accttagacaaagccgacagttcggtcttggggcatgctgcgaaagtggttcttggcaaa
gattacactacaatagttggtgacgggagctctcaagaagcggttgaaaagcgtgtggca
caaattagaaatcttattgaggtagctgagcaggattatgagaaggaaaagcttaacgag
agaattgcaaaactctcggggggtgttgctgttattcaggttggagcacaaaccgaaaca
gaactgaaggagaagaaacttagggttgaagatgctcttaatgcaacaaaggctgcagtt
caggaaggtattgttgttggcggtggatgcactttgttgagactcgcgtctaaagtggat
tccatcaaggaaaccctagataatgatgaagaaaaggttggagcagatattgttaagagg
gctttgagttaccctctgaagttgattgcaaagaatgcgggtgttaatggaagtgttgtt
agcgagaaggttttggctactgataatgctagatttgggtataatgctgctactgatacg
tatgaagatttaatgtcagctggaatcattgacccaactaaggtggtgagatgttgccta
gagcatgcttcgtcggttgcaaaaacatttttgatgtctgactgtgtagttgtggagatt
aaggagcctgaacctgtgccagttggaaacccaatggacaattctggctatggatactaa
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