Bidens hawaiensis: 143550575
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Entry
143550575 CDS
T11418
Name
(RefSeq) E3 ubiquitin protein ligase RIN2-like
KO
K10636
E3 ubiquitin-protein ligase AMFR [EC:
2.3.2.36
]
Organism
bhw Bidens hawaiensis
Pathway
bhw04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
bhw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
143550575
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bhw04121
]
143550575
Enzymes [BR:
bhw01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.36 RING-type E3 ubiquitin transferase (cysteine targeting)
143550575
Ubiquitin system [BR:
bhw04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
143550575
Multi subunit type E3
ERAD complex
143550575
LMBR1L-GP78-UBAC2 complex
143550575
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_SYVN1_N
zf-RING_2
CUE
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-ANAPC11
zf-C3HC4_2
zf-C3HC4_3
zf-RING_11
zf-RING_5
zf-RING_16
zf_RING_Vps8_fungal
zf-C3HC4_4
E3_UbLigase_EDD
PHD
RINGv
AKAP_110
U-box_ZFPL1
zf-RING_Vps41
Kazal_1
zf_RING_Vps8
zf-HC5HC2H
Motif
Other DBs
NCBI-GeneID:
143550575
NCBI-ProteinID:
XP_076897318
LinkDB
All DBs
Position
Unknown
AA seq
562 aa
AA seq
DB search
MGVSYLSVSAACTVLSFIGLRYWTEISYVKLKSDGLMGENLLQPGVASHVMDLLVGSCTT
FALVVNFVLNVFMFIILTLKTIFFVELNASESRKLVERLVNYVFYKGTFLPLVVPPTMVH
AGLWLTWLTLLCSLKMFQALARDRLERLNASPSATPRTYFRVYCVLLMVVVVDIIWIRTC
LLIYQTISSPVFLLLFFEPLSIAFETLQAILVHGFQLLDVWLHHSSGNTKNSKISKLLDM
SAAGSLWELKSVVIRNLGFFLDIMTLLMALGHYVHIWRLHGMTFHLVDAVLFLNIRALLS
TAAKRIRAFIKLRIALGTLHGALPDATFEEIQTYDDECAICREPMAKAKKLSCNHLFHLS
CLRSWLDQGLSDNYSCPTCRKPLFIGTHEGNSAPHSVNVSSDEQLARQLSSTFELPNDPT
GVSNQPQTPLEHDDWRFDGAGPSTSVRSVGLGRVQMVMRHLAAVGETYAQSALEDASWNL
WPINSSQASTSTSNNPSTSNVRHRGGSVIRSAPRVSDDDLSHLLAMAETVREVLPHVPDE
LIFRDLQRTNSVSVTVNNLLQM
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atgggtgtgagttatttatcggtttcagcagcctgtacggtgttgagctttataggcctc
cggtattggaccgaaatttcgtatgtgaaactaaagtcagatggtttgatgggtgaaaac
cttcttcagcctggggttgccagccatgttatggaccttttggttggttcttgtaccaca
tttgcgttggtggtcaattttgttctcaacgtttttatgtttatcatcttgactcttaag
acaatattttttgttgagctcaatgcatctgaatctcggaagttggtggagcgattagtt
aattatgttttctacaagggaacgtttcttccgttggtagttccaccaacaatggttcat
gcaggattgtggttgacatggttgactctgttatgttctttgaagatgtttcaagctcta
gccagggaccgccttgaacggttgaacgcttccccttctgcgactcccaggacttacttc
cgtgtatattgtgttttactgatggttgtcgttgtcgacataatctggataaggacgtgc
ctactcatctaccaaacaatatcatcacctgtatttctgttattattctttgagcctctt
agcattgccttcgaaacactacaggctattttggttcatgggtttcaactgcttgatgta
tggcttcatcactcaagtggcaacaccaaaaactccaaaatatcaaagcttttggacatg
tcagcagctggttcattgtgggaattgaagagtgttgttatacggaatctcgggtttttt
ctagacattatgactttgttaatggctcttggtcattatgtgcatatctggcggcttcat
ggcatgacttttcatcttgtagatgcagttcttttcctaaatatacgtgccttgttaagc
acagctgcaaagcgtatcagagcgtttattaagttaaggatagctttgggaacacttcac
ggggctcttcctgatgcaacgttcgaagagatacaaacttacgatgatgaatgcgccatt
tgtcgggaaccaatggccaaggctaagaagctctcatgtaatcatctttttcatctttca
tgccttagatcatggttagaccaaggtctaagtgacaattattcctgccccacttgtcgt
aaaccgctctttatcggtacacatgaaggaaactctgcaccacattctgttaacgtttca
agtgatgaacaactcgctcggcagctcagctctacatttgaactgccaaatgatcctacc
ggtgtatctaatcaacctcagacccctttagaacatgacgattggagatttgatggggcg
ggcccatctacatctgtaagatccgtgggtttgggccgagtccaaatggtgatgagacat
cttgcagctgtcggtgaaacatatgcccaaagtgcccttgaagacgcttcttggaatctg
tggccgataaattcatctcaagcgagcacgtctacttcaaacaatccttctactagtaac
gtaagacatcgtggtggttcagttattaggtcggccccacgtgtttcagatgatgatctg
tcacatttactcgcaatggctgaaactgttcgtgaagtgcttccgcatgtccccgatgaa
ttaatatttagagatttgcagcggacaaactcggtttctgttactgtgaataatcttctc
caaatgtaa
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