Bidens hawaiensis: 143551657
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Entry
143551657 CDS
T11418
Name
(RefSeq) uncharacterized protein LOC143551657
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
bhw Bidens hawaiensis
Pathway
bhw03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bhw00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
143551657
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bhw03021
]
143551657
03019 Messenger RNA biogenesis [BR:
bhw03019
]
143551657
Transcription machinery [BR:
bhw03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
143551657
Messenger RNA biogenesis [BR:
bhw03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
143551657
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NUFIP1
Motif
Other DBs
NCBI-GeneID:
143551657
NCBI-ProteinID:
XP_076898165
LinkDB
All DBs
Position
Unknown
AA seq
586 aa
AA seq
DB search
MMNPHQKTNQNPPSASAVQQVNPVTNQQMFNGNVGPVFPNNMPIVAAPGFMNFPNQFPNG
IGGFNPQQNFIPFPVNQFNPSQQQPGQNFMAYRPNVGLQGQQQALVQNTIQNISQLLQLQ
NSNYAQCFPSNFPMFPNPMMNVMNPQNPGFVMNQQFGMPSGNGPMQNGAHGPQNMGPQMQ
GGPFLPSANGSVQTQQPQNIPMIQNQIPQGAGPQNQNFFTNQMFGMTNVSTPMQNDSQGP
PGFSSPMMVNMGQTNSTNVEDNNKNGPTNANGGWNESQQKNFTGHKAYDQSHKGFKFNKH
VKQKFGNYKGNISKDGDSNLEVDAVSRNVTDFEKKVPALIYTEHEIKEWREARKKNYPTS
GTLSEKLKKEHTLSDVTNQGAVLRRQCFVLRQLKEILAKQAELGCEVADISGSYNFLLES
SPKKQNPRDRKHERQQHYKRGKFHNKRGAHFQDVDRYAKKSRSRDQHSFKPNHETKPKKR
EPSLLEKLLTPDIKRDKTHLLQVLRFMTANSFFTEESLRFPPVIVRETNVDAASQETTCS
VVKEINVDVPTKETTCTVVKETNVDVMSKDACSVVKAEEEEGEIID
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atgatgaatcctcatcaaaagaccaatcaaaatccaccgtctgcttctgcagttcaacag
gtaaatcctgtcacgaatcagcaaatgtttaatggtaatgtgggccctgtattccccaac
aatatgcccattgtagctgcacctggtttcatgaatttcccgaatcaattcccaaacggt
atcggtgggttcaatccgcaacagaattttattccgtttcctgtaaaccaattcaacccg
tctcaacaacaaccgggtcaaaactttatggcataccgcccaaatgtcggtttacaaggt
cagcagcaggcccttgtgcagaacacaatccaaaacatcagtcagcttcttcagttacaa
aattctaattatgcccaatgttttcccagtaattttcccatgttcccgaacccgatgatg
aatgttatgaaccctcaaaaccctggatttgttatgaatcagcagtttggaatgcctagt
ggtaacgggcctatgcaaaatggtgctcatgggcctcagaatatgggcccacagatgcaa
gggggcccgtttctacccagtgctaacgggtcagttcaaacacagcaaccacaaaatatt
cccatgatccagaaccagattcctcaaggcgcgggcccacaaaatcagaacttctttaca
aatcagatgtttggtatgactaatgtgagcacgcctatgcaaaatgatagtcaaggccca
ccgggatttagttcaccaatgatggtcaatatgggccaaacaaatagcacaaatgttgag
gacaataataaaaacgggcctactaatgctaatggtgggtggaatgaatctcaacagaag
aacttcacgggacataaagcatatgatcagtcacacaagggatttaagttcaataaacat
gtgaaacagaagtttggaaactacaaaggaaatataagtaaagacggtgacagcaatttg
gaagtcgacgcggtttctcgaaatgtcaccgattttgaaaagaaagtacctgctctgatt
tacactgagcatgaaataaaggagtggcgtgaggctcgtaagaagaactacccgacaagt
gggaccttatctgagaagcttaagaaagaacatactttgtctgatgtaaccaaccaaggc
gccgtgttacgccgtcagtgttttgttttgcggcaattgaaggaaatattagcaaaacaa
gccgagttgggatgtgaagttgccgacatttcagggtcttataattttcttttggaatct
agtcccaaaaaacaaaaccctagagatagaaaacatgaaagacaacaacactacaaaagg
ggtaagtttcataacaaaagaggagcacattttcaagacgttgaccggtatgccaaaaag
tcaaggtcaagagaccaacattccttcaagccgaatcatgaaaccaagccaaagaagcgt
gaaccgtcacttttagagaagcttttgacacccgacattaagagagacaaaactcatctt
ttgcaggttttaaggttcatgacggctaactcgtttttcaccgaggaatctttgagattc
ccgcctgtaatcgtgagagaaacaaatgttgatgcggcatcccaagagacaacatgctct
gttgtaaaggaaataaatgttgatgtgccaactaaagagacaacatgtactgttgttaag
gaaacaaatgttgatgtgatgtctaaagacgcatgttctgttgtaaaggctgaggaggaa
gaaggagaaatcatagattaa
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