Bidens hawaiensis: 143551904
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Entry
143551904 CDS
T11418
Name
(RefSeq) tRNAse Z TRZ4, mitochondrial-like isoform X1
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
bhw Bidens hawaiensis
Brite
KEGG Orthology (KO) [BR:
bhw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bhw03016
]
143551904
Enzymes [BR:
bhw01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
143551904
Transfer RNA biogenesis [BR:
bhw03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
143551904
Prokaryotic type
143551904
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Other DBs
NCBI-GeneID:
143551904
NCBI-ProteinID:
XP_076898358
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Position
Unknown
AA seq
853 aa
AA seq
DB search
MKIDDDVAESQKKLGGFNKKRAEGKDKSRPKDLKLKVRRLNPVNTISYLQILGTGMDTQD
TSPSVLLFFDKQRFIFNAGEGLQRFCTEHKIKLSKIDHIFLSRVCSETAGGLPGLLLTLA
GTGEEGMSVNVWGPSDFKYLVDAMESFIPNAAMVHTRCFGQSSKSDGVLLNNNPEKINDQ
IKLVDDEVVKISAVLLRPETGGVKDESATKSSDISVLYICELPEIRGKFDPEKAKALGLR
PGPKYRELQEGISVKSDLKDIMIHPDDVLGPSVPGPIVLLVDCPTLSHFEEILHSRSLEN
YYADTEEEKHKIVNCVIHLSPSLVVNSGDYQKWMLRFGGAQHIIAGHQMKNIEIPILQSS
ARLAARLNYLCPQFFPAPGFWSLQQPNCSNDSNNLKLCKTVSAENLLKFHLRPYAQLGLD
KSGIPVKAGPTEIINDLISEIPEISDAVKQVSELWEGEEDAGDGVTVIEGDKNINEEPWI
NQNVVSRCLENITRESVEIVLLGTGSSQPSKYRNVSSVFINLFSKGSLLLDCGEGTLGQL
KRRFGIQGADNAVKGLKCIWISHIHADHHTGLARILTLRRDLLKGLPHEPLIVIGPRQLK
RFLDAYERLEDLDMQFLDCRHTTQDSLASFESNYNNQLNENKIESSLFSKGSQMQSHWKR
GIISVDSSVSYPTIKNLKNVISEAGLENVISFPVVHCPQAFGVVLKGMDRVDKNGEIIPG
WKIVYSGDTRPCPELVEASRGATVLIHEATFEDALVEEAIARNHSTTAEAIEMGNSAGAY
RIVLTHFSQRYPKIPVFDESYMHKTCIAFDMMSINFADLHVLPRVLPYLKLLFKNEMIDD
ESDDVEDAVTIAA
NT seq
2562 nt
NT seq
+upstream
nt +downstream
nt
atgaagattgacgatgacgtggccgaaagccagaagaaactgggtgggtttaataagaaa
cgggcggagggtaaagataagagcagacccaaagacctcaaattgaaagttagaaggctt
aatcctgtcaataccatttcttatcttcagattttgggaacaggtatggatactcaagac
acttcaccctcggttttgttgttctttgataagcagaggtttatattcaatgctggagaa
ggtctgcaacggttttgcaccgaacataagattaagttgtcaaagattgatcacatattt
ctttcacgtgtctgctctgaaactgctggtggattacctggtcttttattaacattggct
ggcactggtgaagaggggatgtctgtaaacgtatggggcccctcggattttaaatattta
gttgatgcaatggaatctttcattccaaatgcagccatggttcacacgcgatgcttcggc
cagtcatcaaaatccgatggggttttattaaataataatcctgaaaaaataaatgatcaa
attaaacttgttgatgatgaagtcgtcaaaatatcagctgttttgttgcgacctgaaacc
ggtggggttaaagatgagtcggcaacaaagtcaagtgatatttctgttttgtatatttgc
gagttgcccgagattaggggtaagtttgacccagaaaaggccaaagcacttgggttaagg
cccgggcccaaatatcgtgagctacaagaaggaatatctgttaaatcagatttaaaagat
atcatgattcatcccgatgatgtactcggaccttcggtacctgggcccattgttctcctt
gtagattgccctacactctctcattttgaagagatattacattcgcgttcacttgagaat
tactatgcggataccgaagaggaaaaacacaaaattgtcaattgtgtgattcatttaagt
ccgtcattagttgtaaactctggtgattatcaaaagtggatgttaagatttggtggagcc
cagcatattatagcaggacatcaaatgaagaatattgagataccaattttgcaatctagt
gcaaggcttgcagctcgattgaattatttatgccctcaattttttccagctccgggcttt
tggtctcttcagcaaccgaattgttcaaatgatagtaataatttaaagctttgcaagact
gtttctgctgaaaatcttctcaagtttcatttgcgtccttatgcacaacttggattagac
aaatctggtataccggttaaagcggggcccaccgaaatcattaatgacctaatttcagaa
attccagagatttctgatgctgttaagcaagtttctgagctttgggaaggtgaagaagat
gcaggggatggggtaacggttattgaaggtgacaagaacataaatgaagaaccttggatt
aatcaaaacgttgtttctagatgtctggaaaatattacaagagaaagtgtcgaaattgtc
cttttaggaacgggctcatctcagccgtccaagtaccggaatgttagttctgtcttcatc
aatcttttctctaaaggtagtttgttactagattgtggtgaaggaacacttggtcagcta
aaacgaagattcggtatccagggcgcagataacgcagtcaaaggtttaaaatgcatttgg
atttcacatatccacgcagatcaccacacgggcttagcaagaatacttactctaagacgt
gacttgctgaaggggctacctcacgaacctttaatcgtcattgggcctagacaactcaaa
agattcctagacgcgtatgaacgactcgaagatttagatatgcagtttcttgattgtaga
catacaacacaagattctttagcctcttttgaatcaaactataataaccaattaaacgaa
aacaaaattgaaagtagtttgttttctaaaggaagtcaaatgcagagccattggaaaagg
gggattatttcggttgatagtagcgtatcgtatccgactatcaagaatttgaaaaacgtg
atcagtgaagcgggtttagaaaatgttattagttttcctgttgtgcactgtcctcaagct
tttggagtggttttgaagggtatggatagagttgataaaaacggggaaataatacccggg
tggaagattgtttattcgggtgatactcgaccgtgtccggagttggtggaagcttctaga
ggagcaacggttttgatacacgaggcaacttttgaggatgctttagtggaggaagccata
gcaagaaaccacagtacaacagcagaagccattgaaatggggaactctgcgggagcgtat
cgaatcgttcttacacatttcagtcaaagatacccgaagattccggtttttgatgaatct
tacatgcataaaacatgcattgctttcgatatgatgagcattaactttgcagatttacat
gtgcttccgagagtgcttccgtaccttaaactactgtttaaaaatgaaatgattgacgat
gaatctgatgacgtggaagatgctgttactatagcagcctga
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