Bidens hawaiensis: 143553660
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Entry
143553660 CDS
T11418
Name
(RefSeq) DNA damage-binding protein 1-like
KO
K10610
DNA damage-binding protein 1
Organism
bhw Bidens hawaiensis
Pathway
bhw03420
Nucleotide excision repair
bhw04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
bhw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
143553660
09124 Replication and repair
03420 Nucleotide excision repair
143553660
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bhw04121
]
143553660
03400 DNA repair and recombination proteins [BR:
bhw03400
]
143553660
Ubiquitin system [BR:
bhw04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Adoptor protein
143553660
DNA repair and recombination proteins [BR:
bhw03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
143553660
TCR (transcription coupled repair) factors
Cul4-CSA complex
143553660
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
CPSF_A
Beta-prop_RSE1_2nd
Beta-prop_DCAF12
Motif
Other DBs
NCBI-GeneID:
143553660
NCBI-ProteinID:
XP_076899719
LinkDB
All DBs
Position
Unknown
AA seq
1089 aa
AA seq
DB search
MSTYNYVVTAHKPTNVTHSCVGNFTAPHELNLIMAKCTRIEIHLLTPQGLQPLLDVPIYG
RIATLELFRPHGETQDLLFIATERYKFCVLQWDAAANELVTRSNGDVSDRIGRPTDNGQI
GIIDPDCRLIGLHLYDGLFKVIPIDNRGQLKEAFNIRLEELQVLDIKFLYGCPKPTIVVL
YQDNKDARHVKTYEVSLKDKDFVEGPWSQNNLDNGADLLIPVPPPFGGVLIIGEETIVYC
SASTFKAIPIRPSITRSYGRVDADGSRYLLGDLNGLLHLLVIVHEKEKVTGLKIELLGET
SVASTISYLDNAFVYVGSSYGDSQLIKLNLHPDVKGSYVEALEKYVNLGPIVDFCVVDLE
RQGQGQVVTCSGAYKDGSLRIVRKGIGINEQASVELQGIKGMWSLRSATEDAHDTFLVVT
FINQTRILAMNMEDELEETEIEGFCSEVQTLFCHDAVHNQLVQVTSSSVRLVSSISRELR
HEWHAPKGFSINVATANASQVLLATRGGHLVYLEIEDGKLFEKNHAQLKHDISCLDINPI
GENPSKSNLAAVGMWTDISVKIFSLPTLEPITEEHIGGEIIPRSVLLCAFEGIPYLLCAL
GDGHLLNFLLDTDTGKLTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKL
LYSNVNLKEVSYMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHAKRICH
QEKSRTFAICSLKYNQSSTEESESHFIRLLDDQTFDFISTYSLDQFECGCSILSCSFSDD
NNAYYCVGTAYVMPEENEPTKGRILVFIVEDGKLLLVAEKETKGAVYSLNAFNGKLLAAI
NQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEG
AIEERARDYNANWMSAVEILNDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHL
GEFVNRFRHGSLVMRLADSDVGHIPTIIFGTVNGVIGVIASLPQDQYIFMEKLQTSLRKV
IKGVGGLSHEQWRSFYNEKKTAESRSFLDGDLIESFLDLGRNRMEEISKSMNVSVEELMK
RVEELTRLH
NT seq
3270 nt
NT seq
+upstream
nt +downstream
nt
atgagtacgtataattacgtggttacagctcacaagcctaccaatgtcactcactcatgc
gtcggcaatttcaccgctccacacgaactcaatctcatcatggcgaaatgtacccgtata
gagattcatttacttactcctcaaggcttgcagcctttgttggatgtgccaatatatgga
agaattgcaactctagaacttttccgtcctcatggtgaaacacaagaccttctgtttatt
gcaacagaaagatacaagttttgtgttcttcaatgggacgcagctgcgaatgagcttgtt
acaagatctaatggtgatgtatcagatcgcataggcagacctactgacaatggccagata
ggcataattgacccagactgcagactcattggactccatttgtatgatgggttgtttaag
gttattccaattgataacagaggacaactcaaagaagcatttaacatcaggctagaagaa
cttcaagttttggatataaagtttctatatggttgtccaaagcctacaattgttgttctt
tatcaggataataaagatgctcgccatgtaaaaacttatgaggtttctttgaaagataaa
gactttgttgaaggtccatggtctcagaacaatcttgataacggggctgatttgctgatt
ccggttccaccaccttttggtggtgtattaatcatcggggaagagacaattgtgtattgt
agtgcttctacatttaaagcgatcccaattagaccttctattactagatcctatggaagg
gtggatgctgatggttccaggtatctacttggtgatcttaatgggcttcttcacttgctc
gttatagtgcacgagaaagaaaaggttactggactaaaaatagagcttcttggtgaaaca
tctgtagcatcaactatatcatatcttgataatgcgtttgtatatgttggctcaagctat
ggagattctcagcttattaagttaaatctccatcctgatgtaaaaggttcttatgttgaa
gcgctagaaaagtatgtcaacttgggtcctattgtagacttttgtgtggttgacttagag
aggcaaggtcaagggcaggttgtcacttgttcaggagcatataaagacggttcccttcgc
attgttagaaaaggaattgggataaacgagcaggcttctgtggaactacaaggtatcaaa
ggaatgtggtcactaagatcagccacagaagacgcgcatgacacatttttggttgttacc
tttattaaccagactcgaatattagcaatgaacatggaagacgagcttgaggaaactgaa
attgagggcttttgttcagaagtacaaacattattctgtcatgatgctgtgcataatcaa
ctcgttcaggttacttcaagctctgtgagactcgtgagttcaatatcaagagaattaaga
cacgagtggcatgcacctaaaggcttttctattaatgtcgccactgctaatgcttctcag
gttctattggccactagaggtggtcatcttgtttaccttgaaattgaagatggaaaatta
tttgaaaaaaatcatgctcaactgaaacatgatatttcatgccttgacataaacccgatt
ggtgaaaatccaagtaaaagtaaccttgctgcagttggtatgtggacggatattagtgta
aaaatattttcactcccgaccctagagcctattactgaggaacacataggtggtgaaatt
attcctcgatctgttcttctatgtgcctttgaagggataccgtacttgttatgtgcactt
ggagacggtcaccttttaaactttttactggacacagatactggcaagttaacagataga
aaaaaagtttcacttgggacccaaccgataacccttagaacgttttcatcgaagaatacc
acacatgtttttgcagcctccgacaggccaacggttatttacagcagtaacaaaaagtta
ctctacagtaatgtaaacctaaaagaagttagttacatgtgccccttcaattctgctgct
tttccagacagtcttgcaattgctaaagaaggtgaattaacaattgggacaattgatgat
attcagaagcttcacatccgttcaattcctcttggtgaacatgcaaagcgtatctgccat
caagaaaagtctcgtacgtttgcaatatgcagtttaaagtacaaccaatcaagcacagaa
gaatctgaatcacattttattcggttgctagatgaccaaacatttgacttcatatccact
tactcacttgaccaatttgagtgtggttgttccatactcagttgttctttctcagatgac
aacaacgcgtattactgtgtcgggactgcttatgttatgccagaggagaacgaaccaaca
aagggtcgtattttggttttcatagttgaagacgggaagctactattagtagctgagaaa
gaaactaaaggtgcggtttactctttgaatgccttcaatggtaaacttcttgcagctata
aatcaaaaaatccagttgtacaagtggatgcttcgtgatgatggtacacgtgaattacag
tctgaatgtggacatcatggtcacatacttgctctctatgtacaaactcgtggggatttc
atcgttgtcggtgatttgatgaaatcaatttcactcttgatttataagcatgaggaagga
gctatagaggaacgggcacgtgactacaacgccaactggatgtcagcagtcgagattctc
aatgacgacatttacctcggtgctgaaaacaatttcaatctttttacggtccgtaaaaac
agtgaaggtgcaaccgatgaagaacggggccgattagaagtagttggtgaataccaccta
ggtgaatttgtgaaccggttccgacacggttcactcgtgatgcggttagccgattccgac
gtgggccacatcccaaccataatatttggaactgtaaacggtgttatcggtgtcattgct
tctctccctcaagaccaatatatttttatggagaaacttcaaactagtttaaggaaggtt
attaaaggcgttggcgggttgagtcacgagcagtggaggtcgttttataacgagaagaag
acggctgagtcgaggagtttcttggatggtgatttaatcgagtcgtttcttgatctcgga
aggaatagaatggaagaaatttcgaagagtatgaatgtttccgtggaagaacttatgaag
agagtagaagagctgacaaggctgcattga
DBGET
integrated database retrieval system
