Bidens hawaiensis: 143555452
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Entry
143555452 CDS
T11418
Name
(RefSeq) transcription initiation factor TFIID subunit 12b-like isoform X1
KO
K03126
transcription initiation factor TFIID subunit 12
Organism
bhw Bidens hawaiensis
Pathway
bhw03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
bhw00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
143555452
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bhw03021
]
143555452
03036 Chromosome and associated proteins [BR:
bhw03036
]
143555452
Transcription machinery [BR:
bhw03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
143555452
Coactivators
SAGA/TFTC/STAGA complex
143555452
Chromosome and associated proteins [BR:
bhw03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
143555452
STAGA complex
143555452
TFTC complex
143555452
SAGA complex
143555452
SLIK complex
143555452
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIID_20kDa
CBFD_NFYB_HMF
Motif
Other DBs
NCBI-GeneID:
143555452
NCBI-ProteinID:
XP_076901114
LinkDB
All DBs
Position
Unknown
AA seq
562 aa
AA seq
DB search
MADGSSSAPSPIQSTISNLDQQPVSQTLPSSIEPTINNNINNNNSSSSSANVLSQQQQLL
QHQQFQIHQQGLQRSPSMSRLNHIQQQQYNNNNNINNINNNTNNNIPMSTGSNPARIYGQ
MNFTNGQQQQQQNQQQQQIGQIGNASLARSNLLGQTGHLTMNPNQAAQINLQSHLLASPR
AKTGMVQGGSQFQGGQMGMNMNMMGSYNLNNQIRANGGSLAFNQQRMNQAQMRPQLPQQN
ALASSQKLQAQGLSRTSFMTSQLSQLGQNGQLAMLQNNINQQQWSKQMPAPNSPSFRLQQ
QQRQHALMSQQLPSSQLHNSMSLNQQQLSQMIQQQQQQVNQQQPIGHQQQQMPGQQQLLQ
QQSPRIAGSAGQKSLSLTGSQPDATASGTTTPGGSSSQGTEASNHLLGKRNIQDLVAQVD
PNATLDPEVEDLLLMLADEFIDSVTSFGATLAKHRKSSIVESKDILLHLEKNYKLTIPGF
SSEEKKQEQNRPASDLHKKRMDMIQGLMENSYSEATMSNSKPDQRNQFGPNQLTRPSPSS
DQLNHLSNPSQNQQHKQGFDGY
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atggcggatggttcttcatcagcaccatccccaattcaatccacaatttccaacctcgat
caacaacccgtatctcaaaccctaccttcttcaatcgaacccacaattaataataatatt
aataacaacaacagctcatcatcatcagccaacgttctatcccagcaacaacaattgctt
caacatcaacaatttcaaattcatcaacagggtttacagcggtcgccatctatgtcacgt
ttgaatcacatacaacaacaacagtataataacaataataatattaataatattaataat
aatactaataataatattcctatgagtacgggcagcaaccctgctaggatctacgggcag
atgaatttcaccaacggtcagcagcagcagcagcagaatcaacagcaacaacaaattggg
cagattgggaatgcgagtttagcccggtctaacttgctcggtcaaaccggccacctcaca
atgaaccccaatcaagctgcacagattaatttacaatctcatttattagcttcgcctcgg
gcgaaaaccgggatggttcaaggtgggagtcaatttcaaggtgggcaaatggggatgaac
atgaacatgatgggttcttacaatttgaataatcagattagggcaaatggcgggtcgctt
gcttttaaccaacaaaggatgaatcaggcccaaatgagaccgcaattgccacagcaaaat
gcactcgcatctagtcagaaattgcaggcacaaggtctgtcgaggacgtcattcatgacc
tcacagttgtcacaattgggtcaaaatggtcaattagccatgttgcaaaacaatataaat
caacaacaatggtcaaagcaaatgccagcacctaattctccttcgtttcgccttcaacaa
caacaaaggcaacatgcacttatgagtcaacagcttccttcttcgcaattgcacaattca
atgtcattgaaccaacaacaattatcacaaatgattcaacaacagcaacagcaggttaac
cagcaacaaccaattgggcatcagcagcaacagatgccaggtcagcaacaacttttgcag
cagcagtctccaagaattgcaggatctgccggtcaaaaatctctgagtttgaccggatcg
caacctgatgcaactgcatcggggaccaccactccaggcggcagttcgagccaaggcaca
gaagccagtaatcatcttcttggtaaaagaaatattcaagatttggttgcacaggtggat
ccaaatgcaactttagatcctgaagttgaagatcttcttttgatgcttgctgatgaattt
atcgattcggttacttcatttggagccacattggcaaaacatagaaaatcttcaattgtg
gaatcaaaagacattctgctacacctagaaaagaactacaagttaacaattcccgggttc
tcaagtgaagagaagaaacaagaacaaaaccgcccggcaagtgatctccacaagaaacgt
atggatatgatacaaggactgatggagaactcttattctgaagcaactatgagtaattct
aaaccggaccagcgtaaccagtttggtcccaatcagttgaccaggccttccccaagctca
gaccagctgaaccatctttcaaaccctagtcaaaatcagcaacacaaacaagggtttgat
ggttactag
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