Bidens hawaiensis: 143556618
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Entry
143556618 CDS
T11418
Name
(RefSeq) polyadenylate-binding protein 2-like
KO
K13126
polyadenylate-binding protein
Organism
bhw Bidens hawaiensis
Pathway
bhw03015
mRNA surveillance pathway
bhw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bhw00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
143556618
09123 Folding, sorting and degradation
03018 RNA degradation
143556618
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bhw03019
]
143556618
03041 Spliceosome [BR:
bhw03041
]
143556618
Messenger RNA biogenesis [BR:
bhw03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
143556618
mRNA cycle factors
Stress granule specific factors
143556618
Spliceosome [BR:
bhw03041
]
Complex C
Other components
Complex C specific factors
143556618
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_10
RRM_5
RRM_RdRP1_2
RRM_MARF1
RRM_3
Motif
Other DBs
NCBI-GeneID:
143556618
NCBI-ProteinID:
XP_076902008
LinkDB
All DBs
Position
Unknown
AA seq
463 aa
AA seq
DB search
MSMKIATSLPPPALSIHRSALYIGDLDPHTTENDFLLVFSMIGPVRAVRVCRDRLSFKSL
CYAYVNFLLPSHADVAMSTLNHTELRGKPMRIMWCQRDPITRRTGIANLFVKNLDLLVTD
MKLEEVFGEFGKTLSCKIAKDVNGKSKGFGFIQFDSEESANNALKALNGTTLDDKIIYVA
KFMKKSERKEPKFTNVYVKNLDLDITENLLKEKFSEYGNVTSAVIMKDANGGSKRFGFVN
FESPHSAKKAIEGLNGAVIGSKEWFVGKAMKKAERERFLKLSHKNDKINLSNFFVKNLAT
SVNEKILEDTFGEFGKVVLTKVVRYETGISKGFGFVGFSNADEAKKACDSLNGKLYHGKH
MNLSVAMSKEECAQKLQARITSAKIIGHNPYFSPYYGMQSYGKTSIYGPFWQPNIYRSMQ
IFPNFKQWSHQEQVNSGYYKDQKPFKSLKAYFSEGSLAKEAYQ
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgtcaatgaagattgcaacttcattaccaccaccggctctgtcaatccaccggtccgcc
ctgtacatcggcgaccttgacccgcacacgactgagaacgatttccttctagtcttctcg
atgatcggaccggtgcgagctgttcgtgtttgcagagaccgtctctcctttaaatccctc
tgctatgcttacgtcaatttcttacttccttctcacgccgatgtggcaatgtcgactttg
aatcatactgaattgaggggaaaaccgatgagaatcatgtggtgtcaacgagacccgatt
acaagaaggactggaatcgcgaatttgtttgtgaagaatctggatctgttagttactgat
atgaaattagaagaggtttttggggaattcgggaagactctttcgtgtaagattgctaaa
gatgttaatggaaagagtaagggttttggattcattcagtttgattcagaagagtccgct
aataatgcactcaaagctctaaatggaactactcttgatgataaaatcatatatgtggcc
aagtttatgaagaaaagtgagaggaaggagcccaaattcacaaacgtgtatgtgaagaat
cttgatttggatattactgagaatctgttgaaagagaagttttctgaatatgggaatgtt
acaagtgctgtgatcatgaaggatgctaatggaggatcaaaacgtttcgggtttgtcaac
tttgagtcaccacatagtgcaaagaaggccattgaaggtctaaatggtgcagtgatcggt
tctaaggagtggtttgttggaaaggctatgaagaaagcggaaagagaaaggttcttgaaa
ctttctcataaaaatgacaaaataaacttgtcaaatttttttgtcaagaatcttgctacg
tctgtaaatgaaaagattcttgaagacacttttggtgaatttgggaaagtggttttaacc
aaagttgttcgttatgaaactggaattagcaaggggtttggatttgtgggtttctctaat
gcagatgaagcaaagaaagcttgtgattcccttaatgggaaactttatcatggaaagcac
atgaatttaagtgttgcaatgagtaaagaagaatgtgcacagaaattacaagctcgtatc
acatcagcaaagattattggtcacaacccgtatttcagtccgtattatggtatgcagtca
tatggtaaaacatccatctatggtccattctggcagccaaacatttatagaagtatgcaa
attttcccaaattttaaacaatggagtcatcaggaacaggttaactcaggatattacaag
gatcagaagccatttaagagcttgaaagcttatttctcagaaggttcattagccaaggag
gcttaccag
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