Bidens hawaiensis: 143557966
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Entry
143557966 CDS
T11418
Name
(RefSeq) vacuolar protein sorting-associated protein 35A-like
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
bhw Bidens hawaiensis
Pathway
bhw04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
bhw00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
143557966
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bhw04131
]
143557966
Membrane trafficking [BR:
bhw04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
143557966
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps35
Motif
Other DBs
NCBI-GeneID:
143557966
NCBI-ProteinID:
XP_076903023
LinkDB
All DBs
Position
Unknown
AA seq
791 aa
AA seq
DB search
MISEGSVEDEEKWLSAGIAGLQQNAFYMHRALDSNNIKDALKYSAQMLSELRTSRLSPHK
YYDLYMRAFDELRKLELFFKEESRRSCSIIELYELVQHAGNILPRLYLLCTVGSVYIKSK
EAPAKDILKDLVEMCRGIQHPLRGLFLRSYLSQVSRDKLPDIGSEYEGDENTVMDAVEFV
LQNFTEMNKLWVRMQHQGPAREKEKREKERNELRDLVGKNLHVLSQIEGIDLELYRDVVL
PRILEQVVNCKDDLAQYYLMDCIIQVFPDEYHLQTLETLLGACPQLQPSVDIKTVLSGLM
ERLSNYAASSVEVLPEFVQVEAFAKLNNAIGQVIEAQPDMPVFGAVTLYSSLLTFTLHVH
PDRLDYVDQILGACVNKISGKGKLEGKATKQIVALLSAPLEKYSDIDIALKLTNYPLVME
YLDDSTNKVMSNVIIQSIMKNKTHISTADKVGALFELIKGLIKDLDSDSNDEMDEDDFKE
EQNFVARLIQMLYNDDPEEMLKIICTVKKHIMTGGPKRLPFTIPPLIYNALKLVRRVQSQ
DENASEEATASATPKKIFQLLNQTIEVLSTVPAPELALRLYLECAEAANDCDLEPVAYEF
FTQAYILYEEEISDSKAQVTSLYLIIGTLQRMHTFGVENRDTLTHKATGYSAKLLKKPDQ
CRAVYACSHLFWVEDQDGVKDGERVLLCLKRALRIANAAQQMANVTKGSSGSVILFIEIL
NKYLYFFEKGNTQITVASIQGLIELVTTEMQSDTATSDPAADAFFSSTIRYIQSQKAKGG
PTAEKFEPIKV
NT seq
2376 nt
NT seq
+upstream
nt +downstream
nt
atgatctccgaaggcagcgttgaagacgaagagaaatggctgagcgccggcatcgcaggc
ctccaacagaacgccttctacatgcatcgggctttggattccaataacatcaaggacgcc
ttgaaatactctgctcagatgctctcggagctccgtacttccaggctttcacctcacaaa
tactacgacctctatatgagggcttttgatgagttgaggaagctggagctctttttcaag
gaggagagtaggcgcagttgctccattatcgagctctatgaactcgtccagcatgcaggc
aacatattgcccagactgtatctactttgtacagtaggatctgtctacatcaagtcaaaa
gaggctcctgctaaggatatcctaaaagatcttgttgaaatgtgtcggggtatccagcat
cctcttcgtggactcttcttaaggagttatctttctcaagtcagtagggataaattacct
gatattggttcagagtatgaaggggatgaaaacactgttatggatgcagttgagtttgta
cttcagaacttcacagagatgaacaaattgtgggttcgaatgcaacaccagggacctgca
cgtgagaaagagaaacgagaaaaagagaggaatgagcttcgtgatcttgttggaaaaaat
ctacatgttctcagtcaaattgaaggcattgacttagagctgtacagagatgttgttctt
cccagaatcctggagcaggttgtgaattgcaaagatgatcttgctcagtattatttaatg
gattgtataattcaagtctttccggatgagtaccatttacagactcttgaaacattattg
ggtgcttgtccacaacttcagccctctgttgacattaagaccgtactttctggtttaatg
gaaaggctatctaattatgctgcatcaagcgttgaggtcttaccagagtttgttcaagta
gaagcttttgcaaagttgaacaatgccattggtcaggtgatagaagcacaacctgatatg
cctgtttttggcgctgtaacattatattcatctcttctgacatttacacttcatgttcat
cctgatcggcttgactatgtggatcaaatactgggtgcatgtgtgaacaaaatttctggc
aaggggaaactggaaggcaaagcaacaaagcagattgttgcacttctaagtgctccattg
gagaaatatagtgatatagatattgcactaaaacttacaaactatcctctagtaatggag
tacctggatgatagtaccaataaagtcatgtccaatgttattattcaaagcatcatgaaa
aacaaaactcacatctcaaccgctgataaggttggagctttatttgaactaataaaaggg
cttattaaagatttggactctgatagtaatgacgagatggatgaagatgactttaaggaa
gagcaaaattttgttgctcgtttaatacaaatgttgtataatgatgatccagaagagatg
ttaaagattatatgtacagtgaagaagcatattatgaccggaggacccaaacgacttccc
tttacaattcctccacttatatataatgctctcaagttggttaggcgagtacaaagtcag
gatgagaatgctagtgaagaggccacagcatcagccacaccaaaaaagatctttcagtta
ttgaatcagacaattgaagttttgtcaacagttccagcacctgaacttgcattgaggtta
tatttggaatgcgctgaggctgccaatgactgtgatcttgaacctgtagcatacgagttt
ttcacccaagcatacatattatacgaagaagaaatttcagattcaaaggcacaggtaacc
tcattgtacctgattattgggactctgcaacggatgcacacgtttggggtcgaaaatcga
gatactttaacccacaaagccactgggtattctgccaaactgttgaagaagcctgaccag
tgcagagcagtttacgcgtgttcacatttgttttgggttgaggatcaggatggggtcaag
gatggtgagagagtattactctgtttaaaacgtgcgttaagaattgcgaacgctgcccaa
caaatggcaaacgtgacaaaaggtagcagcgggtcagtcatcctctttatagaaattcta
aacaagtacctatacttctttgaaaaggggaacacgcaaatcacagttgcttcaattcaa
ggactgattgagttagttacaactgaaatgcaaagtgacaccgccacgtcagatccagct
gctgatgctttcttttcgagtaccatccggtacatccagtcgcaaaaggccaaaggtgga
cccactgcagagaagtttgagccaattaaggtttga
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