Bidens hawaiensis: 143558586
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Entry
143558586 CDS
T11418
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit B-like
KO
K07466
replication factor A1
Organism
bhw Bidens hawaiensis
Pathway
bhw03030
DNA replication
bhw03420
Nucleotide excision repair
bhw03430
Mismatch repair
bhw03440
Homologous recombination
bhw03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
bhw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
143558586
03420 Nucleotide excision repair
143558586
03430 Mismatch repair
143558586
03440 Homologous recombination
143558586
03460 Fanconi anemia pathway
143558586
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bhw03000
]
143558586
03032 DNA replication proteins [BR:
bhw03032
]
143558586
03400 DNA repair and recombination proteins [BR:
bhw03400
]
143558586
Transcription factors [BR:
bhw03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
143558586
DNA replication proteins [BR:
bhw03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
143558586
DNA repair and recombination proteins [BR:
bhw03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
143558586
MMR (mismatch excision repair)
143558586
DSBR (double strand breaks repair)
HR (homologous recombination)
143558586
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
143558586
NCBI-ProteinID:
XP_076903516
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Position
Unknown
AA seq
601 aa
AA seq
DB search
MMKSATPNAIASIISNPNPDSSVDLPEIVLQVLDLKPSGNRYMFTASDGNNKVKTILQSS
LACEVLNGSIQNLGLIRVIDYTLNDIPNTNEKYLIVAKCEAVSPPLEAEIKADVKSESAG
IVLKPKQEVVTKSAAQIVNEQNGNMAPAARLSMTRRVHPLASLNPYQGNWTIKVRLTSKG
NMRHYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFFDVFEMGRVYYISKGSLKVAN
KQFKTVQNDYEMTLNESSQVEEAVNEAAFIPETKFNFVPIDQLGPYVQQKELIDVIGVVQ
NVSPTMSIRRKIDNETVPKRDITIADDTKKSVVVSLWGPLATDFGQKLLDMSNESPIVAI
KSLRVSDFQGVSLSTVSKSIIEINPDSPDSQKLKSWYGSEGKDSSMESVGSTLSPSMKSG
GRSMYVDRVTLDHITSNPSLGEEKPVFYTTRACMSSIKSDQTMYYRACKTCNKKVTEDVS
SGYFCQACQKTEAECNLRYIVSAKFTDASGEAWFSLFSDDAEKIIGCSADELDNMKSQVE
GSDHQTQLKKATWIPYLFRLMVAPREYNNEKRQRITVKAVSPVDYAAESKMLLDEISSTK
A
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atgatgaaatcggcgactccaaatgcgatagcaagcatcatctcaaaccctaatccggat
tcctccgttgatctgccggaaatcgttcttcaagtgctcgatctcaagccttccggcaac
agatacatgtttactgcaagtgatggaaataataaggtgaagacaattctgcagtctagt
ttagcatgtgaggttctcaatggaagcattcagaacctcgggctcattcgtgtcattgat
tatactctcaatgatattccaaacacgaatgaaaagtacttgattgtggcaaaatgtgaa
gcggtatcgcctcctttggaggctgaaattaaggcggatgtgaagagtgaaagcgcaggc
attgttttgaagccaaagcaagaagttgtcaccaaatcggcagctcaaattgtgaatgag
cagaatggaaacatggcacctgctgcacgtttgtcgatgactaggcgggttcatccgctt
gcttctttgaacccgtatcaaggaaactggacgattaaggttcgactcacttccaaagga
aacatgcgccattacaagaacgcgcgaggtgaaggttgtgtgtttaatgtggaactaact
gatgaagatggtactcaaattcaagcaaccatgtttaatgaggctgcaaggaagttcttt
gatgtgtttgaaatggggagagtttactacatatcgaaaggctctttaaaagtggcgaat
aagcagttcaagaccgtacagaatgattacgaaatgactttgaatgaaagttcccaagtg
gaagaagcggtaaatgaagcggcttttatccctgaaaccaagtttaactttgttccgatt
gatcagttgggaccgtatgtccaacaaaaagaacttattgatgttattggtgttgtgcaa
aatgtgtctccaacaatgagcatcagaaggaaaattgataacgagacggtcccgaaacgt
gacataaccattgcagatgacacgaagaagtctgtagttgtgtccttgtggggccctctt
gcaaccgattttggtcaaaagcttcttgacatgtctaatgagtcaccaattgttgcaatc
aaatcattaagagtatcagattttcaaggtgtatcgttgtcaaccgtgagcaaaagcata
atagaaataaatcctgacagccctgattctcaaaaacttaaatcatggtatggatcagaa
ggcaaagattcgagcatggaatctgtgggctccactttgagcccgtctatgaaaagtggt
ggtcgatccatgtatgttgaccgcgtgacacttgaccatataaccagcaacccgtctttg
ggtgaagaaaagcctgtgttttacaccactcgtgcgtgtatgagttctattaaatctgat
caaaccatgtattatcgcgcatgcaaaacttgcaacaagaaagttactgaagacgttagt
tctggttacttttgtcaagcatgccaaaagactgaagctgagtgcaatttgaggtatatt
gtgtctgcaaagtttactgatgcaagtggtgaagcttggttttctctttttagtgatgat
gccgagaaaataatcggctgctctgctgatgagcttgataatatgaagtcacaggttgaa
ggaagtgatcatcaaacacaacttaagaaagcgacatggatcccatatctttttcggttg
atggttgcgccacgagagtacaataatgaaaaaagacaaaggattactgtgaaggctgtg
agtccggttgattatgcagctgaatctaagatgttgttggatgagatatcttcaacgaaa
gcttga
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