KEGG   Bidens hawaiensis: 143558943
Entry
143558943         CDS       T11418                                 
Name
(RefSeq) cleavage stimulation factor subunit 50-like
  KO
K14406  cleavage stimulation factor subunit 1
Organism
bhw  Bidens hawaiensis
Pathway
bhw03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:bhw00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    143558943
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bhw03019]
    143558943
Messenger RNA biogenesis [BR:bhw03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage stimulation factor (CSTF) complex
     143558943
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_THOC3 WD40 Beta-prop_IFT122_1st LisH_CTF50 Beta-prop_WDR3_1st WD40_Prp19 Beta-prop_WDR3_2nd WD40_CDC20-Fz Beta-prop_EML_2 WDR55 WD40_WDHD1_1st Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_TEP1_2nd EIF3I WD40_Gbeta WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 ANAPC4_WD40 Beta-prop_EML Beta-prop_EIPR1 Beta-prop_WDR90_POC16_2nd Beta-prop_Aladin Beta-prop_TEP1_C Beta-prop_RIG_2nd WD40_MABP1-WDR62_1st NBCH_WD40 Beta-prop_WDR75_1st CFAP251_N Beta-prop_NOL10_N Beta-prop_DCAF4 DSE1_N ASA1 Beta-prop_SCAP Beta-prop_NUP159_NUP214 Cytochrom_D1 Beta-prop_IFT140_1st Ge1_WD40 Beta-prop_NWD2_C PAC11 Beta-prop_VPS8
Other DBs
NCBI-GeneID: 143558943
NCBI-ProteinID: XP_076903796
LinkDB
Position
Unknown
AA seq 438 aa
MDSNNIEQTFEEGKLYRYVNNLIVAHLRHNNLTQAASAVASATMTPLTVEASPNKLLELV
AKGLAVEKDEPGRGLSTSALFDSYTTLPTTYGSIPAPRVVSVDFSVAHDAKGSSKTFPKH
ETKHVSEHKNAVRCARFSPDGRFLASGSADNSIKLFEVGKLKQMLLPEGKDGPVRPVMRT
YYDHLQPVNDVDFHPQNPILISGAKDNAIKFFDFSKTTAKRASRVIQDTHNVRSLSFHPS
GDFLLAGTDHHVPHLYDVNTFQCYLSANVQEIGVNSAINQVRYSCTGGMYVTASKDGTIR
IWDGVTSNVVRSILGAHGSGEATSASFAKDQRYVLSCGKDSSVKLWEVGTGRLVKHYLGA
THTQLRCQAIFNDTEEFVLCVDEPSNEIVIWDSLSAEKVARWPSNHAGTPRWLEHSPTEA
AFVSCGTDRSIRFWKETP
NT seq 1317 nt   +upstreamnt  +downstreamnt
atggattcgaataatatagagcagacattcgaagaaggtaagctttatcgatatgtaaac
aatttaatcgttgctcatcttcgacacaacaatctcactcaggcggcgagtgcggttgct
tcggctacaatgacgccgcttacggttgaagcttctcctaacaagcttcttgagctggtt
gccaagggtcttgcagtggaaaaagacgaaccagggaggggactatctacatctgcattg
tttgattcatacacaacattgccaacaacatatggctcgataccagctcctcgtgtggtt
tctgtcgattttagtgttgcacatgatgcaaaaggctcatcaaaaactttcccaaaacac
gaaaccaaacatgtttcagaacacaagaatgcagtaagatgtgcaagatttagtcctgat
ggaaggtttcttgcatcgggcagtgcagataattcaattaaactgtttgaggtaggaaaa
ctcaagcagatgctgctgccagagggaaaggatggtcctgtgagacccgtcatgaggaca
tattatgaccatctacaaccagtaaatgacgtggatttccatcctcaaaatcctattttg
atatctggggccaaagataacgcaataaagttttttgacttttctaagaccactgcaaag
agagcatccagggttatccaggatactcacaatgttcggtctttatcttttcatccttct
ggagattttcttctagcgggaaccgatcatcatgttccacatttgtatgatgtcaatact
ttccagtgttacctctccgctaatgtacaagaaattggtgttaatagtgcaataaatcag
gtgagatattcatgtacaggtggcatgtatgtaacggcctcgaaagatgggactattaga
atatgggacggggtgactagcaatgttgttcggtccatacttggtgcacatggatcaggt
gaagccactagtgcaagttttgccaaagatcaaagatatgttctctcgtgtggaaaggat
tcttccgtgaaactgtgggaagttggaaccgggagattagtcaaacattatcttggagcc
acacacacacaattacgttgccaggcgatctttaacgatacagaagaatttgtattatgt
gttgatgaacctagtaacgagattgtcatatgggattctctgagtgcagaaaaagtggct
agatggccatctaaccatgcgggtacgcccaggtggctcgaacactcaccaactgaggca
gcattcgtgtcatgtggtaccgatcggtcaataagattttggaaggaaactccttag

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