Bidens hawaiensis: 143559275
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Entry
143559275 CDS
T11418
Name
(RefSeq) putative tRNA pseudouridine synthase
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
bhw Bidens hawaiensis
Brite
KEGG Orthology (KO) [BR:
bhw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bhw03016
]
143559275
Enzymes [BR:
bhw01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
143559275
Transfer RNA biogenesis [BR:
bhw03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
143559275
Prokaryotic type
143559275
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_1
Dicer_dimer
Motif
Other DBs
NCBI-GeneID:
143559275
NCBI-ProteinID:
XP_076904020
LinkDB
All DBs
Position
Unknown
AA seq
477 aa
AA seq
DB search
MATILTHSPFNLNFNLNLSYSQTTSNKVWLSNPNYKTNSIGIQCFSTSPRSLAVHETLAH
PPVNDTAAQKWAAFRKRKVLMRVGYVGIDYKAIEKELETAIYKAGGIRDSNFGDLNKIAW
ARSSRTDKGVHSLSTMISLKMEILESAWVGDPNGVELANLVNSYLPKSIRVFSILPSQRS
FDARRECNIRKYSYLLPVEVIGITSNFSEAEIEHHLSDFNNILNSFEGKHPFHNYTVRKN
YRKKYSAKQPPDSGRMANRRAKLKWSNKPMLEKRDEEELSEIGCNESDEIDSNSVDGESV
ININSDKEVANESDANGNNNDLEVAPVLAKWLHEPDEKDRISASHFRRIFQCSCGKMEKL
FGASYVEISICGESFMLHQIRKMVGTAVAIKRGLLRRDIITLSLNKFTRIVVPIAPSEVL
FLRSNNFAMRTRLDSRPEMVTLVESEEILREVEDFYKTIMLPQVSVFLDPSRPPWKE
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccatattgactcactctccttttaatcttaactttaatcttaatcttagttac
agtcaaaccacctccaacaaagtctggttatcaaaccctaactacaaaaccaattcaatc
ggaatccaatgcttttccacttctcctcggtctcttgctgttcacgaaaccctagctcat
ccgccggtcaacgacactgccgctcagaaatgggcggctttccggaagcggaaggtgttg
atgcgagtcggttacgttggcattgactacaaagctattgagaaagagctggaaacagcc
atttacaaagcaggcggaattcgtgacagtaactttggggatttgaacaagatagcatgg
gctagaagtagcagaaccgataaaggagttcattctttatcaaccatgatatcacttaaa
atggaaatccttgaaagcgcatgggttggtgaccccaatggggtagaacttgcaaatctt
gtcaattcatatcttcctaaaagtattagagttttcagtatcctaccttcacaaaggagt
tttgatgctagaagggaatgtaacatccggaaatatagttacctccttcctgttgaagtg
attgggataactagtaactttagtgaagctgaaattgaacatcacttatcagacttcaat
aatatactaaattcttttgagggaaaacatcctttccataattatacagttcgaaaaaac
tacagaaaaaaatattctgcaaaacagcctcccgacagtgggcgcatggccaatagacga
gcaaaattaaaatggtcaaataaaccaatgcttgaaaaacgtgatgaggaagaattgtcg
gaaataggatgcaatgaatctgatgaaattgattcaaattctgttgatggagaatcagta
ataaacattaattcagataaagaagttgctaatgaatctgatgcaaatgggaataataat
gatttggaggttgcacctgttcttgctaaatggttacatgaacctgatgaaaaagataga
ataagtgcctcacatttcagaagaatatttcagtgttcatgtggaaaaatggaaaaattg
tttggggcaagttatgttgagatttccatttgtggggagtcattcatgctacatcaaatc
cgcaaaatggtggggaccgcggtggcaataaagcgtggcctacttcggagagacataatc
acactctcactaaacaaattcactcgtattgtggtaccgatcgctccatctgaagtattg
tttttaagatcaaacaattttgccatgagaacgcgtcttgattcgaggcccgaaatggtg
actttggttgaatcagaagaaatactgagagaagttgaagatttttataaaacaattatg
ttgcctcaagtttcagtattcttggatccttctagacctccatggaaggaatga
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